RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 RBBP8NLQ8NC74 664 aaPredicted RBP11.92□□□□□ -0.5
SF3B6-201ENST00000233468 STKLD1Q8NE28 680 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 SHKBP1Q8TBC3 707 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 GPR152Q8TDT2 470 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 ING5Q8WYH8 240 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 SMARCD2Q92925 531 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 TTLL2Q9BWV7 592 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 LRRC3Q9BY71 257 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 TASP1Q9H6P5 420 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 ZFP14Q9HCL3 533 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 PLCB1Q9NQ66 1216 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 DNAJC12Q9UKB3 198 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 DUSP12Q9UNI6 340 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 CNTN6Q9UQ52 1028 aa11.92□□□□□ -0.5
SF3B6-201ENST00000233468 EP300Q09472 2414 aaPredicted RBP11.91□□□□□ -0.5
SF3B6-201ENST00000233468 ANHXE9PGG2 379 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 ECI2O75521 394 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 SERPINC1P01008 464 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 F11P03951 625 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 TPM3P06753 285 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 SETSIPP0DME0 302 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 AOC1P19801 751 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 WEE1P30291 646 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 AVPR1AP37288 418 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 USP8P40818 1118 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 CCR2P41597 374 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 SLC5A3P53794 718 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 PTK2Q05397 1052 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 BST2Q10589 180 aaKnown RBP11.91□□□□□ -0.5
SF3B6-201ENST00000233468 CNGA2Q16280 664 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 ARHGAP44Q17R89 818 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 GPR158Q5T848 1215 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 KLHDC7AQ5VTJ3 777 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 ADGRD1Q6QNK2 874 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 LCLAT1Q6UWP7 414 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 CLEC20AQ6ZU45 233 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 GAREM2Q75VX8 874 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 FMNL3Q8IVF7 1028 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 FBXO32Q969P5 355 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 TCEAL4Q96EI5 215 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 KREMEN1Q96MU8 473 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 KCNK16Q96T55 309 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 EPAS1Q99814 870 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 ANP32EQ9BTT0 268 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 LSM14BQ9BX40 385 aaKnown RBP11.91□□□□□ -0.5
SF3B6-201ENST00000233468 TSPY26PQ9H489 355 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 IL21Q9HBE4 155 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 CBX8Q9HC52 389 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 ZNF334Q9HCZ1 680 aaPredicted RBP11.91□□□□□ -0.5
SF3B6-201ENST00000233468 TSPAN16Q9UKR8 245 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 FBXL21Q9UKT6 434 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 NOTCH4Q99466 2003 aa11.91□□□□□ -0.5
SF3B6-201ENST00000233468 TRAV19A0A0A6YYK7 116 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 UCHL3P15374 230 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 ZNF132P52740 706 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 SNX16P57768 344 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 HTR4Q13639 388 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 RAPGEF1Q13905 1077 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 IQCB1Q15051 598 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 ANGPT1Q15389 498 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 MEA1Q16626 185 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 GOLGA7BQ2TAP0 167 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 LRSAM1Q6UWE0 723 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 TADA2BQ86TJ2 420 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 MON1AQ86VX9 555 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 CCDC105Q8IYK2 499 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 ARHGAP18Q8N392 663 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 SLC44A3Q8N4M1 653 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 NEK11Q8NG66 645 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 ZSCAN18Q8TBC5 510 aaPredicted RBP11.9□□□□□ -0.5
SF3B6-201ENST00000233468 DEPDC1BQ8WUY9 529 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 SHC3Q92529 594 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 KAT5Q92993 513 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 ELSPBP1Q96BH3 223 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 ASB16Q96NS5 453 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 SMOQ99835 787 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 STK33Q9BYT3 514 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 KIF9Q9HAQ2 790 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 TRPV4Q9HBA0 871 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 OBP2AQ9NY56 170 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 CA14Q9ULX7 337 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 NUMBLQ9Y6R0 609 aa11.9□□□□□ -0.5
SF3B6-201ENST00000233468 FANCMQ8IYD8 2048 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 NCANO14594 1321 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 O00370 1275 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 TNFRSF10BO14763 440 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 XPO1O14980 1071 aaKnown RBP11.89□□□□□ -0.51
SF3B6-201ENST00000233468 MOSPD3O75425 235 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 USP17L7P0C7H9 530 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 CCDC172P0C7W6 258 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 GJA1P17302 382 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 GNA15P30679 374 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 CACNA2D1P54289 1103 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 CYP4F8P98187 520 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 PFKPQ01813 784 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 KCNMA1Q12791 1236 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 IFRD2Q12894 506 aaPredicted RBP11.89□□□□□ -0.51
SF3B6-201ENST00000233468 TAF10Q12962 218 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 FAM78AQ5JUQ0 283 aa11.89□□□□□ -0.51
SF3B6-201ENST00000233468 YAF2Q8IY57 180 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms