RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 DDX1Q92499 740 aaKnown RBP12.26□□□□□ -0.45
TNFAIP1-201ENST00000226225 TNIP3Q96KP6 325 aa12.26□□□□□ -0.45
TNFAIP1-201ENST00000226225 PWWP2AQ96N64 755 aa12.26□□□□□ -0.45
TNFAIP1-201ENST00000226225 TMEM237Q96Q45 408 aa12.26□□□□□ -0.45
TNFAIP1-201ENST00000226225 TMEM59LQ9UK28 342 aa12.26□□□□□ -0.45
TNFAIP1-201ENST00000226225 GIT1Q9Y2X7 761 aa12.26□□□□□ -0.45
TNFAIP1-201ENST00000226225 VDRP11473 427 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 CCDC142Q17RM4 750 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 HP1BP3Q5SSJ5 553 aaPredicted RBP12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 SEL1L2Q5TEA6 688 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 CPNE8Q86YQ8 564 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 JAMLQ86YT9 394 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 ACSF2Q96CM8 615 aaPredicted RBP12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 ZNF317Q96PQ6 595 aaPredicted RBP12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 FAM118BQ9BPY3 351 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 HEMGNQ9BXL5 484 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 RAB17Q9H0T7 212 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 CNOT10Q9H9A5 744 aaKnown RBP12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 PARVAQ9NVD7 372 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 TJP2Q9UDY2 1190 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 CLDN5O00501 218 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 CALB1P05937 261 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 RAG1P15918 1043 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 PSMA2P25787 234 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 RPL7AP62424 266 aaKnown RBP12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 NT5DC3Q86UY8 548 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 ECHDC2Q86YB7 292 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 SCUBE3Q8IX30 993 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 LRRC52Q8N7C0 313 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 LRRC57Q8N9N7 239 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 KCNN1Q92952 543 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 NSRP1Q9H0G5 558 aaKnown RBP12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 ZWILCHQ9H900 591 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 ETNK1Q9HBU6 452 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 LRRC4Q9HBW1 653 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 NGRNQ9NPE2 291 aaKnown RBP12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 SPATS2LQ9NUQ6 558 aaKnown RBP12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 CASP8AP2Q9UKL3 1982 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 SKIP12755 728 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 CETN2P41208 172 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 RABGGTBP53611 331 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 LACTB2Q53H82 288 aaPredicted RBP12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 MDH1BQ5I0G3 518 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 ARMC3Q5W041 872 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 PRKAG2Q9UGJ0 569 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 GGA2Q9UJY4 613 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 DERAQ9Y315 318 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 SCINQ9Y6U3 715 aa12.25□□□□□ -0.45
TNFAIP1-201ENST00000226225 TBKBP1A7MCY6 615 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 CCDC188H7C350 402 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 DESP17661 470 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 GATMP50440 423 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 NCALDP61601 193 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 PLCB3Q01970 1234 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 SCN4BQ8IWT1 228 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 RNF217Q8TC41 542 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 ERP44Q9BS26 406 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 UVRAGQ9P2Y5 699 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 TMEM120BA0PK00 339 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 C5orf60A6NFR6 353 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 CTNNA2P26232 953 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 DCAF12L1Q5VU92 463 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 ATXN2LQ8WWM7 1075 aaKnown RBP12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 ALG3Q92685 438 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 KRT35Q92764 455 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 PLVAPQ9BX97 442 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 PABPC3Q9H361 631 aaKnown RBP12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 PHF24Q9UPV7 400 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 TCRBV7S2A1N4TA0A589 114 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 F8W810 466 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 PI4K2BG5E9Z4 385 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 C2CD2LO14523 706 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 RNF8O76064 485 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 RARAP10276 462 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 RPL21P46778 160 aaKnown RBP12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 NOMO2Q5JPE7 1267 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 TTC39CQ8N584 583 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 ARHGEF2Q92974 986 aaKnown RBP12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 ZSWIM1Q9BR11 485 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 OSBPL1AQ9BXW6 950 aa12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 METTL5Q9NRN9 209 aaKnown RBP12.24□□□□□ -0.45
TNFAIP1-201ENST00000226225 PAEPP09466 180 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 KCNE1P15382 129 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 HOXC8P31273 242 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 MBTPS1Q14703 1052 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 EMC10Q5UCC4 262 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 KIAA1841Q6NSI8 718 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 VSIG1Q86XK7 387 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 CPXM1Q96SM3 734 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 ADAM7Q9H2U9 754 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 ZMYND8Q9ULU4 1186 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 E5RJQ4 531 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 CAPN9O14815 690 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 HSPA1AP0DMV8 641 aaKnown RBP12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 HSPA1BP0DMV9 641 aaKnown RBP12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 UNGP13051 313 aaPredicted RBP12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 SMTNL2Q2TAL5 461 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 PTPN20Q4JDL3 420 aa12.23□□□□□ -0.45
TNFAIP1-201ENST00000226225 ANKRD20A2Q5SQ80 823 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms