RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 UNC5CO95185 931 aa26.04■■□□□ 1.76
RUNDC3A-201ENST00000225441 CCND1P24385 295 aa26.04■■□□□ 1.76
RUNDC3A-201ENST00000225441 KDELR1P24390 212 aa26.04■■□□□ 1.76
RUNDC3A-201ENST00000225441 NBPF20Q3BBV1 942 aa26.04■■□□□ 1.76
RUNDC3A-201ENST00000225441 CEP57Q86XR8 500 aa26.04■■□□□ 1.76
RUNDC3A-201ENST00000225441 FAM49AQ9H0Q0 323 aaPredicted RBP26.04■■□□□ 1.76
RUNDC3A-201ENST00000225441 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 INO80B-WBP1J3KQ70 363 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 GBP2P32456 591 aaPredicted RBP26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 ZNF200P98182 395 aaPredicted RBP26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 ZKSCAN8Q15776 578 aaPredicted RBP26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 PKN2Q16513 984 aaKnown RBP26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 PARP6Q2NL67 630 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 SEZ6Q53EL9 994 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 LHX8Q68G74 356 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 ADGRD1Q6QNK2 874 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 PRUNE1Q86TP1 453 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 ZNF410Q86VK4 478 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 ECHDC2Q86YB7 292 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 DNAJC5GQ8N7S2 189 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 NAT8LQ8N9F0 302 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 CMASQ8NFW8 434 aaPredicted RBP26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 LRRC8CQ8TDW0 803 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 SH3TC2Q8TF17 1288 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 PYROXD1Q8WU10 500 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 TMEM121Q9BTD3 319 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 INO80BQ9C086 356 aaPredicted RBP26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 ACSS3Q9H6R3 686 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 MINDY3Q9H8M7 445 aa26.03■■□□□ 1.76
RUNDC3A-201ENST00000225441 EDF1O60869 148 aaKnown RBP26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 ETS1P14921 441 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 ATP2A2P16615 1042 aaKnown RBP26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 GABRB2P47870 512 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 TFAMQ00059 246 aaKnown RBP26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 MYO1EQ12965 1108 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 DENND1BQ6P3S1 775 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 GIMAP7Q8NHV1 300 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 ACTL9Q8TC94 416 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 NLRP7Q8WX94 980 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 RSAD2Q8WXG1 361 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 MIS12Q9H081 205 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 EBF2Q9HAK2 575 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 CYP3A43Q9HB55 503 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 RABGEF1Q9UJ41 708 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 PHTF1Q9UMS5 762 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 TTLL13PA6NNM8 815 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 FOXO6A8MYZ6 492 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 TM9SF1O15321 606 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 LRCH4O75427 683 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 ATICP31939 592 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 RFC1P35251 1148 aaPredicted RBP26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 CTCFP49711 727 aaPredicted RBP26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 OTUD4Q01804 1114 aaKnown RBP26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 PTPN20Q4JDL3 420 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 ZNF667Q5HYK9 610 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 HHATQ5VTY9 493 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 TXNRD3NBQ6F5E7 133 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 TTC39CQ8N584 583 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 RMDN2Q96LZ7 410 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 TMEM237Q96Q45 408 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 PRMT7Q9NVM4 692 aaPredicted RBP26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 GTF2IRD1Q9UHL9 959 aa26.02■■□□□ 1.76
RUNDC3A-201ENST00000225441 APOC4-APOC2K7ER74 178 aa26.01■■□□□ 1.75
RUNDC3A-201ENST00000225441 HNRNPCL1O60812 293 aaKnown RBP26.01■■□□□ 1.75
RUNDC3A-201ENST00000225441 APOC2P02655 101 aa26.01■■□□□ 1.75
RUNDC3A-201ENST00000225441 PCK1P35558 622 aa26.01■■□□□ 1.75
RUNDC3A-201ENST00000225441 PSMC1P62191 440 aaKnown RBP26.01■■□□□ 1.75
RUNDC3A-201ENST00000225441 CDC42EP1Q00587 391 aa26.01■■□□□ 1.75
RUNDC3A-201ENST00000225441 ATF7IP2Q5U623 682 aa26.01■■□□□ 1.75
RUNDC3A-201ENST00000225441 AGGF1Q8N302 714 aaeCLIP26.01■■□□□ 1.75
RUNDC3A-201ENST00000225441 INPP5DQ92835 1189 aa26.01■■□□□ 1.75
RUNDC3A-201ENST00000225441 FRMD8Q9BZ67 464 aaPredicted RBP26.01■■□□□ 1.75
RUNDC3A-201ENST00000225441 VRTNQ9H8Y1 702 aa26.01■■□□□ 1.75
RUNDC3A-201ENST00000225441 TNFSF13BQ9Y275 285 aa26.01■■□□□ 1.75
RUNDC3A-201ENST00000225441 HTTP42858 3142 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 CST8O60676 142 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 SPAG6O75602 509 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 IFNB1P01574 187 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 CA4P22748 312 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 STIP1P31948 543 aaKnown RBP26■■□□□ 1.75
RUNDC3A-201ENST00000225441 KCNJ2P63252 427 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 FASTKD3Q14CZ7 662 aaKnown RBP26■■□□□ 1.75
RUNDC3A-201ENST00000225441 KYAT1Q16773 422 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 FAM187BQ17R55 369 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 CPT1BQ92523 772 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 XRN2Q9H0D6 950 aaKnown RBP eCLIP26■■□□□ 1.75
RUNDC3A-201ENST00000225441 ADAMTS10Q9H324 1103 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 RSAD1Q9HA92 442 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 IQCF3P0C7M6 154 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 RASSF2P50749 326 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 GPX6P59796 221 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 MGAT5Q09328 741 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 CYP4A22Q5TCH4 519 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 PDIK1LQ8N165 341 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 DNAJB3Q8WWF6 145 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 MCRS1Q96EZ8 462 aa26■■□□□ 1.75
RUNDC3A-201ENST00000225441 PAIP2Q9BPZ3 127 aaKnown RBP26■■□□□ 1.75
RUNDC3A-201ENST00000225441 RPF1Q9H9Y2 349 aaKnown RBP26■■□□□ 1.75
RUNDC3A-201ENST00000225441 SPAG7O75391 227 aa25.99■■□□□ 1.75
RUNDC3A-201ENST00000225441 CABYRO75952 493 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms