RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 GLI1P08151 1106 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 SPATA31D3P0C874 917 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 LCP1P13796 627 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 EPCAMP16422 314 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 HMGA1P17096 107 aaKnown RBP14.76□□□□□ -0.05
SEC61B-201ENST00000223641 ALDH1A3P47895 512 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 USP46P62068 366 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 MRPS5P82675 430 aaKnown RBP14.76□□□□□ -0.05
SEC61B-201ENST00000223641 SLC6A3Q01959 620 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 PLD1Q13393 1074 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 MAMLD1Q13495 774 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 GRIN2CQ14957 1233 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 LIN9Q5TKA1 542 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 SDHAF4Q5VUM1 108 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 LLGL2Q6P1M3 1020 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 SPATA31D4Q6ZUB0 917 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 SLC26A9Q7LBE3 791 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 RHOT2Q8IXI1 618 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 SLC7A14Q8TBB6 771 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 CLEC4CQ8WTT0 213 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 IRGQQ8WZA9 623 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 TRMT2BQ96GJ1 504 aaKnown RBP14.76□□□□□ -0.05
SEC61B-201ENST00000223641 PIWIL1Q96J94 861 aaKnown RBP14.76□□□□□ -0.05
SEC61B-201ENST00000223641 FBXO44Q9H4M3 255 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 NSUN3Q9H649 340 aaKnown RBP14.76□□□□□ -0.05
SEC61B-201ENST00000223641 SYNCQ9H7C4 482 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 PARVAQ9NVD7 372 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 ASNSD1Q9NWL6 643 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 UVRAGQ9P2Y5 699 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 DPP7Q9UHL4 492 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 SALL4Q9UJQ4 1053 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 TMEM59LQ9UK28 342 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 SCML2Q9UQR0 700 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 ASB3Q9Y575 518 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 DUSP10Q9Y6W6 482 aa14.76□□□□□ -0.05
SEC61B-201ENST00000223641 SLC38A8A6NNN8 435 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 USP27XA6NNY8 438 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 SART1O43290 800 aaKnown RBP14.75□□□□□ -0.05
SEC61B-201ENST00000223641 ATMINO43313 823 aaPredicted RBP14.75□□□□□ -0.05
SEC61B-201ENST00000223641 KRT86O43790 486 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 ZMYND10O75800 440 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 POU2F2P09086 479 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 CSH1P0DML2 217 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 CSH2P0DML3 217 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 NRIP1P48552 1158 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 TWF1Q12792 350 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 MTMR3Q13615 1198 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 EFHC1Q5JVL4 640 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 OR6B2Q6IFH4 312 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 GPR153Q6NV75 609 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 TMEM184AQ6ZMB5 413 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 BEND5Q7L4P6 421 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 RBM23Q86U06 439 aaKnown RBP14.75□□□□□ -0.05
SEC61B-201ENST00000223641 SIX6OS1Q8N1H7 587 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 SLC35G2Q8TBE7 412 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 GPR152Q8TDT2 470 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 PPP2R3CQ969Q6 453 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 PSMG2Q969U7 264 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 TSGA10Q9BZW7 698 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 PRDM12Q9H4Q4 367 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 MRPL47Q9HD33 250 aaKnown RBP14.75□□□□□ -0.05
SEC61B-201ENST00000223641 MAN1C1Q9NR34 630 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 EHD2Q9NZN4 543 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 COG5Q9UP83 839 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 SCINQ9Y6U3 715 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 MYO16Q9Y6X6 1858 aa14.75□□□□□ -0.05
SEC61B-201ENST00000223641 GOLGA6L9A6NEM1 432 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 TMEM191CA6NGB0 347 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 YJEFN3A6XGL0 299 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 E7ENQ6 273 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 CCP110O43303 1012 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 USP17L7P0C7H9 530 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 ZDHHC11BP0C7U3 371 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 KRT3P12035 628 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 YWHAQP27348 245 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 EPHB3P54753 998 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 HYAL1Q12794 435 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 FAM102AQ5T9C2 384 aaPredicted RBP14.74□□□□□ -0.05
SEC61B-201ENST00000223641 DNAJC24Q6P3W2 148 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 DNAJB7Q7Z6W7 309 aaPredicted RBP14.74□□□□□ -0.05
SEC61B-201ENST00000223641 PHLDB2Q86SQ0 1253 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 RNF10Q8N5U6 811 aaKnown RBP14.74□□□□□ -0.05
SEC61B-201ENST00000223641 STKLD1Q8NE28 680 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 VN1R2Q8NFZ6 395 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 FEZF2Q8TBJ5 459 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 GIPC2Q8TF65 315 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 OVCA2Q8WZ82 227 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 NDRG1Q92597 394 aaKnown RBP14.74□□□□□ -0.05
SEC61B-201ENST00000223641 LRCH3Q96II8 777 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 CALR3Q96L12 384 aaKnown RBP14.74□□□□□ -0.05
SEC61B-201ENST00000223641 NUP85Q9BW27 656 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 LRRC3Q9BY71 257 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 OSGEPQ9NPF4 335 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 ZDHHC7Q9NXF8 308 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 TRMT1Q9NXH9 659 aaKnown RBP14.74□□□□□ -0.05
SEC61B-201ENST00000223641 MYO1AQ9UBC5 1043 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 TRIM10Q9UDY6 481 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 CHORDC1Q9UHD1 332 aaPredicted RBP14.74□□□□□ -0.05
SEC61B-201ENST00000223641 MTCH2Q9Y6C9 303 aa14.74□□□□□ -0.05
SEC61B-201ENST00000223641 DENND4CQ5VZ89 1909 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms