RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 M0R2N6 131 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 ALDH7A1P49419 539 aaKnown RBP11.93□□□□□ -0.5
NOD1-201ENST00000222823 MED21Q13503 144 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 PAN2Q504Q3 1202 aaKnown RBP11.93□□□□□ -0.5
NOD1-201ENST00000222823 HYIQ5T013 277 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 SLFN11Q7Z7L1 901 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 ATP6V0D2Q8N8Y2 350 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 KCNQ5Q9NR82 932 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 USP18Q9UMW8 372 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 SDR42E2A6NKP2 422 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 EML1O00423 815 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 C9orf131Q5VYM1 1079 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 TDRD10Q5VZ19 366 aaKnown RBP11.93□□□□□ -0.5
NOD1-201ENST00000222823 BTNL9Q6UXG8 535 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 SPOCD1Q6ZMY3 1216 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 RAB42Q8N4Z0 105 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 MYCBPAPQ8TBZ2 947 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 DACH2Q96NX9 599 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 OSMRQ99650 979 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 ADAMTS7Q9UKP4 1686 aa11.93□□□□□ -0.5
NOD1-201ENST00000222823 SUPT3HB4E1H0 165 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 THP07101 528 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 C1QBPQ07021 282 aaKnown RBP11.92□□□□□ -0.5
NOD1-201ENST00000222823 SREBF2Q12772 1141 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 OVGP1Q12889 678 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 CYTH1Q15438 398 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 TRIP10Q15642 601 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 CLEC16AQ2KHT3 1053 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 SYTL3Q4VX76 610 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 SETD3Q86TU7 594 aaPredicted RBP11.92□□□□□ -0.5
NOD1-201ENST00000222823 EME1Q96AY2 570 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 COLEC11Q9BWP8 271 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.92□□□□□ -0.5
NOD1-201ENST00000222823 CAND2O75155 1236 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 ATICP31939 592 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 CPA2P48052 419 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 FCGRTP55899 365 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 DDR1Q08345 913 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 POTEAQ6S8J7 498 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.92□□□□□ -0.5
NOD1-201ENST00000222823 NIPA1Q7RTP0 329 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 RFWD2Q8NHY2 731 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 SLC5A5Q92911 643 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 AKT1S1Q96B36 256 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 CPB2Q96IY4 423 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 TMEM106CQ9BVX2 250 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 PKD2L2Q9NZM6 624 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.92□□□□□ -0.5
NOD1-201ENST00000222823 CDYLQ9Y232 598 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 PPP2R3BQ9Y5P8 575 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 ADCY3O60266 1144 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 RALBP11234 206 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 SLC11A2P49281 568 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 GEMP55040 296 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 GCNT1Q02742 428 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 GTF2H3Q13889 308 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 ZRANB3Q5FWF4 1079 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 FBXO47Q5MNV8 452 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 CAPRIN2Q6IMN6 1127 aaKnown RBP11.92□□□□□ -0.5
NOD1-201ENST00000222823 C11orf63Q6NUN7 778 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 DENND1BQ6P3S1 775 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 DENND5BQ6ZUT9 1274 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 ZFPM1Q8IX07 1006 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 ADGRF2Q8IZF7 708 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 NSL1Q96IY1 281 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 OLFM3Q96PB7 478 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 EIF2AQ9BY44 585 aaKnown RBP11.92□□□□□ -0.5
NOD1-201ENST00000222823 AP4E1Q9UPM8 1137 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 TMEM150BA6NC51 233 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 C2CD2LO14523 706 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 ADAMTS3O15072 1205 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 ZSCAN9O15535 394 aaPredicted RBP11.92□□□□□ -0.5
NOD1-201ENST00000222823 PRPF4O43172 522 aaKnown RBP eCLIP11.92□□□□□ -0.5
NOD1-201ENST00000222823 RHOBTB1O94844 696 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 DDX5P17844 614 aaKnown RBP11.92□□□□□ -0.5
NOD1-201ENST00000222823 TNFRSF8P28908 595 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 RAP1GAPP47736 663 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 PTENP60484 403 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 LRRC23Q53EV4 343 aaPredicted RBP11.92□□□□□ -0.5
NOD1-201ENST00000222823 MCOLN2Q8IZK6 566 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 CCDC33Q8N5R6 958 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 OR9Q1Q8NGQ5 310 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 MRIQ9BWK5 157 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 ILKAPQ9H0C8 392 aaPredicted RBP11.92□□□□□ -0.5
NOD1-201ENST00000222823 PCDHB7Q9Y5E2 793 aa11.92□□□□□ -0.5
NOD1-201ENST00000222823 AKAP10O43572 662 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 EPHX2P34913 555 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 PTPN7P35236 360 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 PRKCIP41743 596 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 MARSP56192 900 aaKnown RBP11.91□□□□□ -0.5
NOD1-201ENST00000222823 LY6KQ17RY6 165 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 MRNIPQ6NTE8 343 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 C16orf89Q6UX73 402 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 PRPF39Q86UA1 669 aaKnown RBP11.91□□□□□ -0.5
NOD1-201ENST00000222823 BLOC1S5Q8TDH9 187 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 BHMTQ93088 406 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 LRRC40Q9H9A6 602 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 GDF3Q9NR23 364 aa11.91□□□□□ -0.5
NOD1-201ENST00000222823 SCHIP1Q9P0W5 487 aaPredicted RBP11.91□□□□□ -0.5
NOD1-201ENST00000222823 COL18A1P39060 1754 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms