RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 IFT88Q13099 833 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 KLF1Q13351 362 aaPredicted RBP10.43□□□□□ -0.74
USP11-201ENST00000218348 PTGISQ16647 500 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 IQSEC1Q6DN90 963 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 PMF1Q6P1K2 205 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 LRIG3Q6UXM1 1119 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 SLAIN1Q8ND83 568 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 DYDC1Q8WWB3 177 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 RXFP2Q8WXD0 754 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 VPS37BQ9H9H4 285 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.43□□□□□ -0.74
USP11-201ENST00000218348 BHMG1C9JSJ3 638 aaPredicted RBP10.43□□□□□ -0.74
USP11-201ENST00000218348 SHOX2O60902 331 aaPredicted RBP10.43□□□□□ -0.74
USP11-201ENST00000218348 PGK1P00558 417 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 AFF1P51825 1210 aaKnown RBP10.43□□□□□ -0.74
USP11-201ENST00000218348 CDH6P55285 790 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 RBP5P82980 135 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 E2F5Q15329 346 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 FAM183BPQ6ZVS7 135 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 NLRP14Q86W24 1093 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 CD302Q8IX05 232 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 FAM71DQ8N9W8 422 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 RBM15Q96T37 977 aaKnown RBP eCLIP10.43□□□□□ -0.74
USP11-201ENST00000218348 TXLNGYQ9BZA5 131 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 GCOM2Q9BZD3 368 aaPredicted RBP10.43□□□□□ -0.74
USP11-201ENST00000218348 YIPF3Q9GZM5 350 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 CRISPLD2Q9H0B8 497 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.43□□□□□ -0.74
USP11-201ENST00000218348 MED7O43513 233 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 ATP6V1G1O75348 118 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 RNF8O76064 485 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 TJP3O95049 919 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 EIF4BP23588 611 aaKnown RBP10.43□□□□□ -0.74
USP11-201ENST00000218348 GJA9P57773 515 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 TWF2Q6IBS0 349 aaKnown RBP10.43□□□□□ -0.74
USP11-201ENST00000218348 TRNP1Q6NT89 227 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 CTU1Q7Z7A3 348 aaKnown RBP10.43□□□□□ -0.74
USP11-201ENST00000218348 CPLX4Q7Z7G2 160 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 HOOK3Q86VS8 718 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 CCDC13Q8IYE1 715 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 RCOR2Q8IZ40 523 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 CYP4X1Q8N118 509 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 VCPIP1Q96JH7 1222 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 NME7Q9Y5B8 376 aa10.43□□□□□ -0.74
USP11-201ENST00000218348 TANC1Q9C0D5 1861 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 HAS3O00219 553 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 SEPT4O43236 478 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 LIASO43766 372 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 VIMP08670 466 aaKnown RBP10.42□□□□□ -0.74
USP11-201ENST00000218348 RARGP13631 454 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 CTCFP49711 727 aaPredicted RBP10.42□□□□□ -0.74
USP11-201ENST00000218348 CLUL1Q15846 466 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 TFDP3Q5H9I0 405 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 SPATA21Q7Z572 469 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 SRRM1Q8IYB3 904 aaKnown RBP10.42□□□□□ -0.74
USP11-201ENST00000218348 MYCBPAPQ8TBZ2 947 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 ZNF473Q8WTR7 871 aaKnown RBP10.42□□□□□ -0.74
USP11-201ENST00000218348 PEBP4Q96S96 227 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 PRMT1Q99873 361 aaKnown RBP10.42□□□□□ -0.74
USP11-201ENST00000218348 NT5C1AQ9BXI3 368 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 hCG_1818297A0A087WSY0 165 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 CLDN5O00501 218 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 SPAG7O75391 227 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 INHAP05111 366 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 CDKN2BP42772 138 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 GPD2P43304 727 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 BASP1P80723 227 aaKnown RBP10.42□□□□□ -0.74
USP11-201ENST00000218348 SKOR1P84550 965 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 PIGHQ14442 188 aaPredicted RBP10.42□□□□□ -0.74
USP11-201ENST00000218348 MFSD10Q14728 455 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 TMED2Q15363 201 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 CCNG2Q16589 344 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 CXCL17Q6UXB2 119 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 ZBED8Q8IZ13 594 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 CCDC89Q8N998 374 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 GRK7Q8WTQ7 553 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 LPPQ93052 612 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 FAM149B1Q96BN6 582 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 RBM41Q96IZ5 413 aaKnown RBP10.42□□□□□ -0.74
USP11-201ENST00000218348 CABS1Q96KC9 395 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 SLC5A4Q9NY91 659 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 NINJ2Q9NZG7 142 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 FAM169AQ9Y6X4 670 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 PDE4DIPQ5VU43 2346 aa10.42□□□□□ -0.74
USP11-201ENST00000218348 A0A1B0GVG6 124 aa10.41□□□□□ -0.74
USP11-201ENST00000218348 LSM8O95777 96 aaKnown RBP10.41□□□□□ -0.74
USP11-201ENST00000218348 P4HA1P13674 534 aa10.41□□□□□ -0.74
USP11-201ENST00000218348 PRKAR2AP13861 404 aaKnown RBP10.41□□□□□ -0.74
USP11-201ENST00000218348 ITIH2P19823 946 aa10.41□□□□□ -0.74
USP11-201ENST00000218348 MCCD1P59942 119 aaPredicted RBP10.41□□□□□ -0.74
USP11-201ENST00000218348 ADAM17P78536 824 aa10.41□□□□□ -0.74
USP11-201ENST00000218348 MYO1EQ12965 1108 aa10.41□□□□□ -0.74
USP11-201ENST00000218348 AUHQ13825 339 aaKnown RBP10.41□□□□□ -0.74
USP11-201ENST00000218348 ANKRD22Q5VYY1 191 aa10.41□□□□□ -0.74
USP11-201ENST00000218348 TTC30AQ86WT1 665 aa10.41□□□□□ -0.74
USP11-201ENST00000218348 UNC45BQ8IWX7 931 aa10.41□□□□□ -0.74
USP11-201ENST00000218348 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.41□□□□□ -0.74
USP11-201ENST00000218348 CXorf38Q8TB03 319 aa10.41□□□□□ -0.74
USP11-201ENST00000218348 RSAD2Q8WXG1 361 aa10.41□□□□□ -0.74
USP11-201ENST00000218348 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.41□□□□□ -0.741e-6■■■■■ 56.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms