RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 PTP4A2Q12974 167 aa28.66■■■□□ 2.18
CHMP4B-201ENST00000217402 MCOLN2Q8IZK6 566 aa28.66■■■□□ 2.18
CHMP4B-201ENST00000217402 SMG7Q92540 1137 aaKnown RBP28.66■■■□□ 2.18
CHMP4B-201ENST00000217402 FBXO32Q969P5 355 aa28.66■■■□□ 2.18
CHMP4B-201ENST00000217402 PABPC5Q96DU9 382 aaKnown RBP28.66■■■□□ 2.18
CHMP4B-201ENST00000217402 ISCUQ9H1K1 167 aa28.66■■■□□ 2.18
CHMP4B-201ENST00000217402 KCNF1Q9H3M0 494 aa28.66■■■□□ 2.18
CHMP4B-201ENST00000217402 FBXO44Q9H4M3 255 aa28.66■■■□□ 2.18
CHMP4B-201ENST00000217402 PIDD1Q9HB75 910 aa28.66■■■□□ 2.18
CHMP4B-201ENST00000217402 ZNF334Q9HCZ1 680 aaPredicted RBP28.66■■■□□ 2.18
CHMP4B-201ENST00000217402 USP3Q9Y6I4 520 aa28.66■■■□□ 2.18
CHMP4B-201ENST00000217402 ZBED1O96006 694 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 ABCB4P21439 1286 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 SKIV2LQ15477 1246 aaKnown RBP28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 OR6B2Q6IFH4 312 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 PPP1R2P3Q6NXS1 205 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 SYCE2Q6PIF2 218 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 FAM183BPQ6ZVS7 135 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 HS6ST3Q8IZP7 471 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 TTLL2Q9BWV7 592 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 EIF3CLB5ME19 914 aaKnown RBP28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 ARHGAP6O43182 974 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 CALB1P05937 261 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 GABRB2P47870 512 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 C1QBPQ07021 282 aaKnown RBP28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 TAF10Q12962 218 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 COL19A1Q14993 1142 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 SPA17Q15506 151 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 XYLT1Q86Y38 959 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 CMASQ8NFW8 434 aaPredicted RBP28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 PIWIL1Q96J94 861 aaKnown RBP28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 EIF3CQ99613 913 aaKnown RBP28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 DESI2Q9BSY9 194 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 PACSIN1Q9BY11 444 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 CNGB3Q9NQW8 809 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 IL37Q9NZH6 218 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 EHD2Q9NZN4 543 aa28.65■■■□□ 2.18
CHMP4B-201ENST00000217402 ATMINO43313 823 aaPredicted RBP28.64■■■□□ 2.18
CHMP4B-201ENST00000217402 IPO7O95373 1038 aaKnown RBP28.64■■■□□ 2.18
CHMP4B-201ENST00000217402 LTBRP36941 435 aa28.64■■■□□ 2.18
CHMP4B-201ENST00000217402 ACRBPQ8NEB7 543 aa28.64■■■□□ 2.18
CHMP4B-201ENST00000217402 TRMT2BQ96GJ1 504 aaKnown RBP28.64■■■□□ 2.18
CHMP4B-201ENST00000217402 MYRFLQ96LU7 910 aa28.64■■■□□ 2.18
CHMP4B-201ENST00000217402 ASAH2Q9NR71 780 aa28.64■■■□□ 2.18
CHMP4B-201ENST00000217402 GMIPQ9P107 970 aa28.64■■■□□ 2.18
CHMP4B-201ENST00000217402 DNMT3BQ9UBC3 853 aaKnown RBP28.64■■■□□ 2.18
CHMP4B-201ENST00000217402 CDH22Q9UJ99 828 aa28.64■■■□□ 2.18
CHMP4B-201ENST00000217402 GOLGA8SH3BPF8 625 aa28.63■■■□□ 2.17
CHMP4B-201ENST00000217402 FBXO21O94952 628 aa28.63■■■□□ 2.17
CHMP4B-201ENST00000217402 LCA5LO95447 670 aa28.63■■■□□ 2.17
CHMP4B-201ENST00000217402 DAOAP59103 153 aa28.63■■■□□ 2.17
CHMP4B-201ENST00000217402 TOGARAM2Q6ZUX3 1019 aa28.63■■■□□ 2.17
CHMP4B-201ENST00000217402 GRASPQ7Z6J2 395 aaPredicted RBP28.63■■■□□ 2.17
CHMP4B-201ENST00000217402 TMC8Q8IU68 726 aa28.63■■■□□ 2.17
CHMP4B-201ENST00000217402 ZNF653Q96CK0 615 aa28.63■■■□□ 2.17
CHMP4B-201ENST00000217402 SLITRK1Q96PX8 696 aa28.63■■■□□ 2.17
CHMP4B-201ENST00000217402 COMMD8Q9NX08 183 aa28.63■■■□□ 2.17
CHMP4B-201ENST00000217402 STRIP2Q9ULQ0 834 aa28.63■■■□□ 2.17
CHMP4B-201ENST00000217402 SCML2Q9UQR0 700 aa28.63■■■□□ 2.17
CHMP4B-201ENST00000217402 GREB1Q4ZG55 1949 aa28.63■■■□□ 2.17
CHMP4B-201ENST00000217402 POU2F2P09086 479 aa28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 MYL4P12829 197 aa28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 HOXB8P17481 243 aaPredicted RBP28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 PTPN2P17706 415 aa28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 RRM1P23921 792 aa28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 GALCP54803 685 aa28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 NTHL1P78549 312 aa28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 MRPS5P82675 430 aaKnown RBP28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 CLUL1Q15846 466 aa28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 PM20D1Q6GTS8 502 aa28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 OLFML1Q6UWY5 402 aa28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 THAP2Q9H0W7 228 aa28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 UXTQ9UBK9 157 aaPredicted RBP28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 CHORDC1Q9UHD1 332 aaPredicted RBP28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 MYO16Q9Y6X6 1858 aa28.62■■■□□ 2.17
CHMP4B-201ENST00000217402 FAM92AA1XBS5 289 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 RHOP08100 348 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 LRRC3Q9BY71 257 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 YJEFN3A6XGL0 299 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 E7ENQ6 273 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 H2AFZP0C0S5 128 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 MAGEA1P43355 309 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 PGFP49763 221 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 FAM102AQ5T9C2 384 aaPredicted RBP28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 H2AFVQ71UI9 128 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 BHLHA9Q7RTU4 235 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 TRIM11Q96F44 468 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 VCPIP1Q96JH7 1222 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 IL21Q9HBE4 155 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 MYO1AQ9UBC5 1043 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 CNOT8Q9UFF9 292 aaKnown RBP28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 REXO2Q9Y3B8 237 aaKnown RBP28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 PCDHA13Q9Y5I0 950 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 EYSQ5T1H1 3165 aa28.61■■■□□ 2.17
CHMP4B-201ENST00000217402 NCANO14594 1321 aa28.6■■■□□ 2.17
CHMP4B-201ENST00000217402 A0A1W2PQH9 124 aa28.6■■■□□ 2.17
CHMP4B-201ENST00000217402 PAPLNO95428 1278 aa28.6■■■□□ 2.17
CHMP4B-201ENST00000217402 ABL1P00519 1130 aa28.6■■■□□ 2.17
CHMP4B-201ENST00000217402 GABRR2P28476 465 aa28.6■■■□□ 2.17
CHMP4B-201ENST00000217402 SLC6A3Q01959 620 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms