RNA–Protein interactions for RNA: ENST00000217315.9

TM9SF4-201, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2 BASIC

Gene TM9SF4, Length 4,032 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-201ENST00000217315 CDCA5Q96FF9 252 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 TTC1Q99614 292 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 NIFKQ9BYG3 293 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 DRG1Q9Y295 367 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 SOWAHBA6NEL2 793 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 MX2P20592 715 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 PGM1P36871 562 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 TAF6P49848 677 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 GRIK4Q16099 956 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 BBS12Q6ZW61 710 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 CCDC124Q96CT7 223 aaKnown RBP12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 STAMBPL1Q96FJ0 436 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 TMEM237Q96Q45 408 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 GPR20Q99678 358 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 LRRC4CQ9HCJ2 640 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 ITGA11Q9UKX5 1188 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 CFLARO15519 480 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 CCDC22O60826 627 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 TCF4P15884 667 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 BGNP21810 368 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 CYP2F1P24903 491 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 ECHS1P30084 290 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 KBTBD12Q3ZCT8 623 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 EFHC1Q5JVL4 640 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 C1orf146Q5VVC0 180 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 C9orf131Q5VYM1 1079 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 MFSD5Q6N075 450 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 SLC26A11Q86WA9 606 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 UNC45BQ8IWX7 931 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 C12orf50Q8NA57 414 aaPredicted RBP12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 USP33Q8TEY7 942 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.84□□□□□ -0.353e-9■■□□□ 12.5
TM9SF4-201ENST00000217315 AFG3L2Q9Y4W6 797 aa12.84□□□□□ -0.35
TM9SF4-201ENST00000217315 EEF2KO00418 725 aaKnown RBP12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 DNM1LO00429 736 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 GPC4O75487 556 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 FAAP100Q0VG06 881 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 DCAF4L1Q3SXM0 396 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 POTEAQ6S8J7 498 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 TFB1MQ8WVM0 346 aaKnown RBP12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 PPME1Q9Y570 386 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 PDE4DIPQ5VU43 2346 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 SCN7AQ01118 1682 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 A0A1W2PPM1 405 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 RRN3P2A6NIE6 340 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 LRCH4O75427 683 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 USP2O75604 605 aaPredicted RBP12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 ITGAVP06756 1048 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 SKIP12755 728 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 ACADSBP45954 432 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 KCNJ2P63252 427 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 TAF1BQ53T94 588 aaPredicted RBP12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 FBXO47Q5MNV8 452 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 B3GNT9Q6UX72 402 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 RNPEPQ9H4A4 650 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 FNDC3AQ9Y2H6 1198 aaKnown RBP12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 TNRC6CQ9HCJ0 1690 aaKnown RBP12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 PTPRJQ12913 1337 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 ATP6V1G2O95670 118 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 SLC4A1P02730 911 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 ARF4P18085 180 aaPredicted RBP12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 CCND1P24385 295 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 ACAT1P24752 427 aaKnown RBP12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 PLPPR4Q7Z2D5 763 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 CCNYL1Q8N7R7 359 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 DDX1Q92499 740 aaKnown RBP12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 ZNF75CPQ92670 426 aaPredicted RBP12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 KAT2BQ92831 832 aa12.83□□□□□ -0.36
TM9SF4-201ENST00000217315 B2RBV5 119 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 GPR25O00155 361 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 CBX6O95503 412 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 GSTA2P09210 222 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 CETPP11597 493 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 NCAM1P13591 858 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 ICAM3P32942 547 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 BCAT1P54687 386 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 CDC42EP1Q00587 391 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 FAM182AQ5T1J6 154 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 TXNRD3NBQ6F5E7 133 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 ZNF669Q96BR6 464 aaPredicted RBP12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 PPP1R36Q96LQ0 422 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 FRMD8Q9BZ67 464 aaPredicted RBP12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 PLEKHA5Q9HAU0 1116 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 XAB2Q9HCS7 855 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 CPSF3Q9UKF6 684 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 XIRP1Q702N8 1843 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 GIPC1O14908 333 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 MYL2P10916 166 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 AMPD1P23109 780 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 PDK1Q15118 436 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 MTFR1Q15390 333 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 SV2CQ496J9 727 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 FAM183BPQ6ZVS7 135 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 TRABD2AQ86V40 505 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 C1orf127Q8N9H9 656 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 STRA6Q9BX79 667 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 MTO1Q9Y2Z2 717 aaKnown RBP12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 RPS6KL1Q9Y6S9 549 aa12.82□□□□□ -0.36
TM9SF4-201ENST00000217315 DFFAO00273 331 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms