RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 FAM172AQ8WUF8 416 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 DCLK3Q9C098 648 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 ASB7Q9H672 318 aa14.28□□□□□ -0.12
SIX4-201ENST00000216513 ABCC6O95255 1503 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 GOLGA8QA0A0J9YX86 632 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.27□□□□□ -0.12
SIX4-201ENST00000216513 HEATR9A2RTY3 570 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 GOLGA8OA6NCC3 632 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 GOLGA8NF8WBI6 632 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 SPDYAQ5MJ70 313 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 TAS1R2Q8TE23 839 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 PNKPQ96T60 521 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 GTF3C4Q9UKN8 822 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 KRT38O76015 456 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 GCKP35557 465 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 BRCC3P46736 316 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 GRIK3Q13003 919 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 SAPCD2Q86UD0 394 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 TRIM42Q8IWZ5 723 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 DDIASQ8IXT1 998 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 MSL3Q8N5Y2 521 aaKnown RBP14.27□□□□□ -0.12
SIX4-201ENST00000216513 NCLNQ969V3 563 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 TSPAN16Q9UKR8 245 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 MRC1P22897 1456 aa14.27□□□□□ -0.12
SIX4-201ENST00000216513 CCDC151A5D8V7 595 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 COPEO14579 308 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 KCNA2P16389 499 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 LAMB3Q13751 1172 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 TARBP2Q15633 366 aaKnown RBP14.27□□□□□ -0.13
SIX4-201ENST00000216513 DBF4BQ8NFT6 615 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 CALR3Q96L12 384 aaKnown RBP14.27□□□□□ -0.13
SIX4-201ENST00000216513 OSBPL9Q96SU4 736 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 NT5MQ9NPB1 228 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 LIMA1Q9UHB6 759 aaKnown RBP14.27□□□□□ -0.13
SIX4-201ENST00000216513 ARVCFO00192 962 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 SUN1O94901 812 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 WASP42768 502 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 P3H1Q32P28 736 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 DCLRE1AQ6PJP8 1040 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 FEZF2Q8TBJ5 459 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 CYP3A43Q9HB55 503 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 CD274Q9NZQ7 290 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 RASA4BC9J798 803 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 RASA4O43374 803 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 SGPL1O95470 568 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 TTC4O95801 387 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 DENND5BQ6ZUT9 1274 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 GABRQQ9UN88 632 aa14.27□□□□□ -0.13
SIX4-201ENST00000216513 A6NNZ2 444 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 MMEP08473 750 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 CSH1P0DML2 217 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 CSH2P0DML3 217 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 SEC13P55735 322 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 NCAPHQ15003 741 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 PKN1Q16512 942 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 TUBB8Q3ZCM7 444 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 SPATA18Q8TC71 538 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 C1QTNF7Q9BXJ2 289 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 ZFATQ9P243 1243 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 RBPJLQ9UBG7 517 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 P4HA2O15460 535 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 GLRA2P23416 452 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 DDR2Q16832 855 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 DENND1CQ8IV53 801 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 TRIM45Q9H8W5 580 aaPredicted RBP14.26□□□□□ -0.13
SIX4-201ENST00000216513 MARCH2Q9P0N8 246 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 GIT1Q9Y2X7 761 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 PKN3Q6P5Z2 889 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 TMEM86AQ8N2M4 240 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 SPACA7Q96KW9 195 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 KLF6Q99612 283 aaPredicted RBP14.26□□□□□ -0.13
SIX4-201ENST00000216513 BBS2Q9BXC9 721 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 INTS13Q9NVM9 706 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 UBIAD1Q9Y5Z9 338 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 SMIM35A0A1B0GVV1 85 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 CYTH3O43739 400 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 MAFO75444 373 aaPredicted RBP14.26□□□□□ -0.13
SIX4-201ENST00000216513 CPA6Q8N4T0 437 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 FAM136AQ96C01 138 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 KLHL29Q96CT2 875 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 CELF6Q96J87 481 aaKnown RBP14.26□□□□□ -0.13
SIX4-201ENST00000216513 GPR20Q99678 358 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 WDR3Q9UNX4 943 aaKnown RBP eCLIP14.26□□□□□ -0.13
SIX4-201ENST00000216513 MRPS17Q9Y2R5 130 aaKnown RBP14.26□□□□□ -0.13
SIX4-201ENST00000216513 OPLAHO14841 1288 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 IL1BP01584 269 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 PLEKP08567 350 aaPredicted RBP14.26□□□□□ -0.13
SIX4-201ENST00000216513 EEF1B2P24534 225 aaKnown RBP14.26□□□□□ -0.13
SIX4-201ENST00000216513 RGS4P49798 205 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 GALCP54803 685 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 SLC51AQ86UW1 340 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 MORC4Q8TE76 937 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 KAT2BQ92831 832 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 C20orf96Q9NUD7 363 aaPredicted RBP14.26□□□□□ -0.13
SIX4-201ENST00000216513 CDY1Q9Y6F8 540 aa14.26□□□□□ -0.13
SIX4-201ENST00000216513 HMOX2P30519 316 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 KDSRQ06136 332 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 C6orf118Q5T5N4 469 aa14.25□□□□□ -0.13
SIX4-201ENST00000216513 HIBCHQ6NVY1 386 aaPredicted RBP14.25□□□□□ -0.13
SIX4-201ENST00000216513 TMC5Q6UXY8 1006 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms