RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 MAFFQ9ULX9 164 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 RAPGEF6Q8TEU7 1601 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 SMCO3A2RU48 225 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 PSMD11O00231 422 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 POU5F1Q01860 360 aaKnown RBP15.07■□□□□ 0
SPTLC2-201ENST00000216484 SAPCD2Q86UD0 394 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 FAM71DQ8N9W8 422 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 PLOD3O60568 738 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 FCGR1AP12314 374 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 DGUOKQ16854 277 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 AGBL2Q5U5Z8 902 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 BNC2Q6ZN30 1099 aaPredicted RBP15.07■□□□□ 0
SPTLC2-201ENST00000216484 RASSF6Q6ZTQ3 369 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 CENPIQ92674 756 aaPredicted RBP15.07■□□□□ 0
SPTLC2-201ENST00000216484 CLCC1Q96S66 551 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 PUS7LQ9H0K6 701 aaKnown RBP15.07■□□□□ 0
SPTLC2-201ENST00000216484 DYRK1BQ9Y463 629 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 PCDHB7Q9Y5E2 793 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 EDC4Q6P2E9 1401 aaKnown RBP15.07■□□□□ 0
SPTLC2-201ENST00000216484 FGFR2P21802 821 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 ARL3P36405 182 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 SMCO1Q147U7 214 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 PLA2G4FQ68DD2 849 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 NAIF1Q69YI7 327 aaPredicted RBP15.07■□□□□ 0
SPTLC2-201ENST00000216484 LYVE1Q9Y5Y7 322 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 CHP2O43745 196 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 SPAG6O75602 509 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 THRAP10827 490 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 STAT5AP42229 794 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 PTGER2P43116 358 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 GLRBP48167 497 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 STAT5BP51692 787 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 C10orf120Q5SQS8 335 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 RNF149Q8NC42 400 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 ZNF669Q96BR6 464 aaPredicted RBP15.07■□□□□ 0
SPTLC2-201ENST00000216484 CHST12Q9NRB3 414 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 ZMYM3Q14202 1370 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 A0A0X1KG70 313 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 STX11O75558 287 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 IFNAR1P17181 557 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 ACOT2P49753 483 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 OVGP1Q12889 678 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 FRMD5Q7Z6J6 570 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 OR6J1Q8NGC5 347 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 SPPL2AQ8TCT8 520 aa15.07■□□□□ 0
SPTLC2-201ENST00000216484 PPP1R10Q96QC0 940 aaKnown RBP15.07■□□□□ 0
SPTLC2-201ENST00000216484 CCDC189A1A4V9 331 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 BCLAF3A2AJT9 711 aaKnown RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 HNRNPH1P31943 449 aaKnown RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 TGM3Q08188 693 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 EIF2S3LQ2VIR3 472 aaKnown RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 LLGL2Q6P1M3 1020 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 MYOM2P54296 1465 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 DYNC1LI2O43237 492 aaPredicted RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 FAM98BQ52LJ0 330 aaKnown RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 GAL3ST3Q96A11 431 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 FAM111AQ96PZ2 611 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 BPIFA3Q9BQP9 254 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 KLHL28Q9NXS3 571 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 KCNH4Q9UQ05 1017 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 THOC2Q8NI27 1593 aaKnown RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 LIN7AO14910 233 aaPredicted RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 CCDC166P0CW27 439 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 CCR4P51679 360 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 SUZ12Q15022 739 aaKnown RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 TDRD5Q8NAT2 981 aaKnown RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 USP13Q92995 863 aaPredicted RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 NUAK2Q9H093 628 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 GPRC5DQ9NZD1 345 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 ARHGEF10O15013 1369 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 WWP2O00308 870 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 TCHHL1Q5QJ38 904 aaPredicted RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 LRIG3Q6UXM1 1119 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 SNX12Q9UMY4 172 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 CIAO1O76071 339 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 PRR29P0C7W0 189 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 RAD23AP54725 363 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 TMEM62Q0P6H9 643 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 EPB41L4AQ9HCS5 686 aaPredicted RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.06■□□□□ 0
SPTLC2-201ENST00000216484 ITIH6Q6UXX5 1313 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 KIF28PB7ZC32 967 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 MAPK9P45984 424 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 AP3M2P53677 418 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 TXNRD1Q16881 649 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 ERFEQ4G0M1 354 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 ATG14Q6ZNE5 492 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 DAW1Q8N136 415 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 SSH3Q8TE77 659 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 SLC35C2Q9NQQ7 365 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 KIF20BQ96Q89 1820 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 ASS1P00966 412 aaKnown RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 EXOSC10Q01780 885 aaKnown RBP15.06■□□□□ 0
SPTLC2-201ENST00000216484 RASGRP2Q7LDG7 609 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 RTKN2Q8IZC4 609 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 CHID1Q9BWS9 393 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.06■□□□□ 07e-7■■■■□ 20.1
SPTLC2-201ENST00000216484 EHD3Q9NZN3 535 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 SNX9Q9Y5X1 595 aa15.06■□□□□ 0
SPTLC2-201ENST00000216484 HIST1H2ABP04908 130 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms