RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 CA9Q16790 459 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 ARHGAP17Q68EM7 881 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 CENPUQ71F23 418 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 CPLX4Q7Z7G2 160 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 CCDC13Q8IYE1 715 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 P3H4Q92791 437 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 CENPTQ96BT3 561 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 CHMP6Q96FZ7 201 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 SNRNP25Q9BV90 132 aaKnown RBP8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 FRMD8P1Q9BZ68 369 aaPredicted RBP8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 SNX25Q9H3E2 840 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 VPS37BQ9H9H4 285 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 MLXIPLQ9NP71 852 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 NAALADL1Q9UQQ1 740 aa8.34□□□□□ -1.07
HMGXB4-201ENST00000216106 TCRBV7S3A2A0A539 114 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 XPOTO43592 962 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 CDH16O75309 829 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 TCEA3O75764 348 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 ENDOD1O94919 500 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 KCNE1P15382 129 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 IGFBP6P24592 240 aaPredicted RBP8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 BCAT1P54687 386 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 HDAC4P56524 1084 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 BASP1P80723 227 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 SF3A3Q12874 501 aaKnown RBP eCLIP8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 CRHR2Q13324 411 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 STAT4Q14765 748 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 TMED2Q15363 201 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 HIF1AQ16665 826 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 PPP6R3Q5H9R7 873 aaPredicted RBP8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 SYCP2LQ5T4T6 812 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 CEP128Q6ZU80 1094 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 SRRM1Q8IYB3 904 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 ADGRF2Q8IZF7 708 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 SOCS4Q8WXH5 440 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 ADAM33Q9BZ11 813 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 KCNK9Q9NPC2 374 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 DDX20Q9UHI6 824 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 A0A087WUV0 522 aaPredicted RBP8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 DPYSL4O14531 572 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 PTGESO14684 152 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 CTSHP09668 335 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 GNAT1P11488 350 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 AKR1A1P14550 325 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 TKTP29401 623 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 LILRA4P59901 499 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 ROR1Q01973 937 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 NOMO1Q15155 1222 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 SV2CQ496J9 727 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 XKR4Q5GH76 650 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 DARS2Q6PI48 645 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 VSTM1Q6UX27 236 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 SAPCD2Q86UD0 394 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 PPIL6Q8IXY8 311 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 ANKRD42Q8N9B4 389 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 ANKRD52Q8NB46 1076 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 TRPV1Q8NER1 839 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 MRRFQ96E11 262 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 RNF157Q96PX1 679 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 CCDC77Q9BR77 488 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 GDAP2Q9NXN4 497 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 HEY1Q9Y5J3 304 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 POC1B-GALNT4F8VUJ3 575 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 HUS1O60921 280 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 ATP2C2O75185 946 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 TMEM63AO94886 807 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 ABHD2P08910 425 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 DRD4P21917 467 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 IL4RP24394 825 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 ACAT1P24752 427 aaKnown RBP8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 HOXC8P31273 242 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 PNPLA4P41247 253 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 MSS51Q4VC12 460 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 GNASQ5JWF2 1037 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 FNBP1LQ5T0N5 605 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 RGMBQ6NW40 437 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 CXCL17Q6UXB2 119 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 PCGF5Q86SE9 256 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 TAX1BP1Q86VP1 789 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 NAT8LQ8N9F0 302 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 LRRN4Q8WUT4 740 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 DYDC1Q8WWB3 177 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 TTC25Q96NG3 672 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 ZNF317Q96PQ6 595 aaPredicted RBP8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 PCDH18Q9HCL0 1135 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 Q9Y3F1 56 aa8.33□□□□□ -1.08
HMGXB4-201ENST00000216106 H7C0C1 242 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 PGK1P00558 417 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 BRAFP15056 766 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 GCAP28676 217 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 ATP5OP48047 213 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 IFT88Q13099 833 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 TFDP2Q14188 446 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 BOLA3Q53S33 107 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 OSTM1Q86WC4 334 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 MAP7D3Q8IWC1 876 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 CRYBG2Q8N1P7 616 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 STK32AQ8WU08 396 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 MAGEB5Q9BZ81 275 aa8.32□□□□□ -1.08
HMGXB4-201ENST00000216106 ZFYVE28Q9HCC9 887 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms