RNA–Protein interactions for RNA: ENST00000162749.6

TNFRSF1A-201, Transcript of TNF receptor superfamily member 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1A, Length 2,223 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-201ENST00000162749 USP18Q9UMW8 372 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 DPYSL4O14531 572 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 KRT7P08729 469 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 SDC4P31431 198 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CHRNA3P32297 505 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 GGCXP38435 758 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ADCY1Q08828 1119 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 MFSD7Q6UXD7 560 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ARCQ7LC44 396 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 LRRTM3Q86VH5 581 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 MAGOHBQ96A72 148 aaKnown RBP20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 SMARCD1Q96GM5 515 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RHOBTB2Q9BYZ6 727 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ZWILCHQ9H900 591 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TMLHEQ9NVH6 421 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 PCSK1NQ9UHG2 260 aa20.62■□□□□ 0.89
TNFRSF1A-201ENST00000162749 HOXA2O43364 376 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CLTBP09497 229 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 EPHB4P54760 987 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ATP11AP98196 1134 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TTC27Q6P3X3 843 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 IFT20Q8IY31 132 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 THEM5Q8N1Q8 247 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 C12orf50Q8NA57 414 aaPredicted RBP20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 LRRD1A4D1F6 860 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 NRP1O14786 923 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RNF40O75150 1001 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CARSP49589 748 aaKnown RBP20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RABGGTBP53611 331 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TRADDQ15628 312 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 LRRC26Q2I0M4 334 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CCDC137Q6PK04 289 aaKnown RBP20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 PEBP4Q96S96 227 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 C11orf49Q9H6J7 331 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 LRRC4Q9HBW1 653 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 PCYOX1Q9UHG3 505 aa20.61■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TRAPPC3O43617 180 aa20.6■□□□□ 0.89
TNFRSF1A-201ENST00000162749 NDUFV1P49821 464 aa20.6■□□□□ 0.89
TNFRSF1A-201ENST00000162749 DR1Q01658 176 aa20.6■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ADCY2Q08462 1091 aa20.6■□□□□ 0.89
TNFRSF1A-201ENST00000162749 EMBQ6PCB8 327 aa20.6■□□□□ 0.89
TNFRSF1A-201ENST00000162749 SPOCD1Q6ZMY3 1216 aa20.6■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CYP4V2Q6ZWL3 525 aaPredicted RBP20.6■□□□□ 0.89
TNFRSF1A-201ENST00000162749 MAIP1Q8WWC4 291 aa20.6■□□□□ 0.89
TNFRSF1A-201ENST00000162749 NDRG1Q92597 394 aaKnown RBP20.6■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CAVIN3Q969G5 261 aa20.6■□□□□ 0.89
TNFRSF1A-201ENST00000162749 LRRC19Q9H756 370 aa20.6■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CSNK1G1Q9HCP0 422 aa20.6■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ADAM28Q9UKQ2 775 aa20.6■□□□□ 0.89
TNFRSF1A-201ENST00000162749 C3orf70A6NLC5 250 aaPredicted RBP20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 BHMG1C9JSJ3 638 aaPredicted RBP20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TADA2AO75478 443 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TRUB2O95900 331 aaKnown RBP20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 KRT10P13645 584 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 COPS2P61201 443 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 MRPS5P82675 430 aaKnown RBP20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TSPY1Q01534 308 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 DHX34Q14147 1143 aaKnown RBP20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ODF2Q5BJF6 829 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 GPRIN1Q7Z2K8 1008 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TSEN2Q8NCE0 465 aaKnown RBP20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 FAM172AQ8WUF8 416 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CASKIN2Q8WXE0 1202 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 C11orf84Q9BUA3 381 aaPredicted RBP20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 MRPL9Q9BYD2 267 aaKnown RBP20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 NGRNQ9NPE2 291 aaKnown RBP20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 OAZ2O95190 189 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 BDNFP23560 247 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CETN2P41208 172 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CDKN2BP42772 138 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TKTL1P51854 596 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 BCAR1P56945 870 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TFDP3Q5H9I0 405 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 RAB41Q5JT25 222 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 EFHC1Q5JVL4 640 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 SIX6OS1Q8N1H7 587 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 C1orf54Q8WWF1 131 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ADAM33Q9BZ11 813 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 MARCH5Q9NX47 278 aa20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 R3HDM2Q9Y2K5 976 aaKnown RBP20.59■□□□□ 0.89
TNFRSF1A-201ENST00000162749 hCG_1818297A0A087WSY0 165 aa20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TBKBP1A7MCY6 615 aa20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 HHLA1C9JL84 531 aa20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 HSF2BPO75031 334 aa20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TFE3P19532 575 aaPredicted RBP20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 PTPN7P35236 360 aa20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 COILP38432 576 aaPredicted RBP20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 PTPN9P43378 593 aa20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 FNTAP49354 379 aa20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 MAPRE1Q15691 268 aaKnown RBP20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CNKSR3Q6P9H4 555 aa20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ATG4AQ8WYN0 398 aa20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 TRIM51Q9BSJ1 452 aa20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 CHST7Q9NS84 486 aa20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 NFU1Q9UMS0 254 aa20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 ZNF638Q14966 1978 aaKnown RBP20.58■□□□□ 0.89
TNFRSF1A-201ENST00000162749 COL4A6Q14031 1691 aa20.58■□□□□ 0.88
TNFRSF1A-201ENST00000162749 GOLGA6BA6NDN3 693 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms