RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 ZNF557Q8N988 423 aaPredicted RBP12.97□□□□□ -0.33
LMCD1-201ENST00000157600 HES6Q96HZ4 224 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 IRX2Q9BZI1 471 aaPredicted RBP12.97□□□□□ -0.33
LMCD1-201ENST00000157600 KCND1Q9NSA2 647 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 MYH13Q9UKX3 1938 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 GUCA1CO95843 209 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 CDH18Q13634 790 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 GPR141Q7Z602 305 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 CYP4Z1Q86W10 505 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 ARID3BQ8IVW6 561 aaPredicted RBP12.97□□□□□ -0.33
LMCD1-201ENST00000157600 NOA1Q8NC60 698 aaKnown RBP12.97□□□□□ -0.33
LMCD1-201ENST00000157600 ZFRQ96KR1 1074 aaKnown RBP12.97□□□□□ -0.33
LMCD1-201ENST00000157600 SRPK1Q96SB4 655 aaKnown RBP12.97□□□□□ -0.33
LMCD1-201ENST00000157600 CRLS1Q9UJA2 301 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 SORCS3Q9UPU3 1222 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 C17orf102A2RUQ5 167 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 USP1O94782 785 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 ALDH1A2O94788 518 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 C6orf222P0C671 652 aaPredicted RBP12.97□□□□□ -0.33
LMCD1-201ENST00000157600 IMPDH2P12268 514 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 RAB27AP51159 221 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 NFIAQ12857 509 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 TMEM154Q6P9G4 183 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 DDX53Q86TM3 631 aaKnown RBP12.97□□□□□ -0.33
LMCD1-201ENST00000157600 C4orf19Q8IY42 314 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 RMDN2Q96LZ7 410 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 AGXT2Q9BYV1 514 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 ADAM30Q9UKF2 790 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 STX7O15400 261 aaKnown RBP12.97□□□□□ -0.33
LMCD1-201ENST00000157600 GCNT1Q02742 428 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 COBLL1Q53SF7 1204 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 NOD2Q9HC29 1040 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 MARCOQ9UEW3 520 aaPredicted RBP12.97□□□□□ -0.33
LMCD1-201ENST00000157600 RNF112Q9ULX5 631 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 ADGRB1O14514 1584 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 TMEM114B3SHH9 223 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 TK2O00142 265 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 NPTXRO95502 500 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 EPHB2P29323 1055 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 C1DQ13901 141 aaKnown RBP12.97□□□□□ -0.33
LMCD1-201ENST00000157600 TAF2Q6P1X5 1199 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 LUZP2Q86TE4 346 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 CAMKK2Q96RR4 588 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 FBXO44Q9H4M3 255 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 TMBIM4Q9HC24 238 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 WWOXQ9NZC7 414 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 STK39Q9UEW8 545 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 PHTF1Q9UMS5 762 aa12.97□□□□□ -0.33
LMCD1-201ENST00000157600 LZTS3O60299 673 aaPredicted RBP12.96□□□□□ -0.33
LMCD1-201ENST00000157600 NQO1P15559 274 aaKnown RBP12.96□□□□□ -0.33
LMCD1-201ENST00000157600 NUDT2P50583 147 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 CDK16Q00536 496 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 CCDC85BQ15834 202 aaPredicted RBP12.96□□□□□ -0.33
LMCD1-201ENST00000157600 CYB5D1Q6P9G0 228 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 NUDT12Q9BQG2 462 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 TRPC7Q9HCX4 862 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 F5H5T6 163 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 ALDH7A1P49419 539 aaKnown RBP12.96□□□□□ -0.33
LMCD1-201ENST00000157600 PRIM2P49643 509 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 PLD1Q13393 1074 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 TAF1CQ15572 869 aaPredicted RBP12.96□□□□□ -0.33
LMCD1-201ENST00000157600 CHSY1Q86X52 802 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 HIC2Q96JB3 615 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 THAP2Q9H0W7 228 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 ARMC7Q9H6L4 198 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.96□□□□□ -0.33
LMCD1-201ENST00000157600 MYO1GB0I1T2 1018 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 PPP3CCP48454 512 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 ZNF177Q13360 481 aaPredicted RBP12.96□□□□□ -0.33
LMCD1-201ENST00000157600 BNC2Q6ZN30 1099 aaPredicted RBP12.96□□□□□ -0.33
LMCD1-201ENST00000157600 STN1Q9H668 368 aaKnown RBP12.96□□□□□ -0.33
LMCD1-201ENST00000157600 SLC40A1Q9NP59 571 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 C3P01024 1663 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 SNAP23O00161 211 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 RHOBTB1O94844 696 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 PDGFRBP09619 1106 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 GRK3P35626 688 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 RGS7P49802 495 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 ZNF720Q7Z2F6 126 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 LRRC39Q96DD0 335 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 BDH2Q9BUT1 245 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 TAGLN3Q9UI15 199 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 A0A087X0T9 212 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 ERI2A8K979 691 aaKnown RBP12.96□□□□□ -0.33
LMCD1-201ENST00000157600 FAM228BP0C875 321 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 TPBGLP0DKB5 382 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 RAD23AP54725 363 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 RCN1Q15293 331 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 LMBRD2Q68DH5 695 aaPredicted RBP12.96□□□□□ -0.33
LMCD1-201ENST00000157600 OOSP2Q86WS3 158 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 LZTR1Q8N653 840 aa12.96□□□□□ -0.33
LMCD1-201ENST00000157600 RIN2Q8WYP3 895 aaPredicted RBP12.96□□□□□ -0.33
LMCD1-201ENST00000157600 HACD1B0YJ81 288 aa12.96□□□□□ -0.34
LMCD1-201ENST00000157600 ZNF544Q6NX49 715 aa12.96□□□□□ -0.34
LMCD1-201ENST00000157600 TXNRD3Q86VQ6 643 aa12.96□□□□□ -0.34
LMCD1-201ENST00000157600 REXO1L1PQ8IX06 675 aa12.96□□□□□ -0.34
LMCD1-201ENST00000157600 ATXN2LQ8WWM7 1075 aaKnown RBP12.96□□□□□ -0.34
LMCD1-201ENST00000157600 FUT8Q9BYC5 575 aa12.96□□□□□ -0.34
LMCD1-201ENST00000157600 DYRK3O43781 588 aa12.96□□□□□ -0.34
LMCD1-201ENST00000157600 ITGB3P05106 788 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms