RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 CHKAP35790 457 aa12.57□□□□□ -0.4
CHPF2-201ENST00000035307 ZNF792Q3KQV3 632 aa12.57□□□□□ -0.4
CHPF2-201ENST00000035307 TRMT10CQ7L0Y3 403 aaKnown RBP12.57□□□□□ -0.4
CHPF2-201ENST00000035307 NSMCE1Q8WV22 266 aa12.57□□□□□ -0.4
CHPF2-201ENST00000035307 SCLYQ96I15 445 aa12.57□□□□□ -0.4
CHPF2-201ENST00000035307 FIZ1Q96SL8 496 aa12.57□□□□□ -0.4
CHPF2-201ENST00000035307 HMGXB4Q9UGU5 601 aa12.57□□□□□ -0.4
CHPF2-201ENST00000035307 CEP350Q5VT06 3117 aa12.57□□□□□ -0.4
CHPF2-201ENST00000035307 MEIS3P2A8K0S8 358 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 CA12O43570 354 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 IL18RAPO95256 599 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 ARFIP2P53365 341 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 STAT4Q14765 748 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 MGAT5BQ3V5L5 792 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 AGBL2Q5U5Z8 902 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 MIB1Q86YT6 1006 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 NUDCD3Q8IVD9 361 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 KCTD17Q8N5Z5 321 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 C1orf127Q8N9H9 656 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 RNF139Q8WU17 664 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 TRIB2Q92519 343 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 FAM111AQ96PZ2 611 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 SLC40A1Q9NP59 571 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 DDX20Q9UHI6 824 aaKnown RBP12.56□□□□□ -0.4
CHPF2-201ENST00000035307 R3HDM2Q9Y2K5 976 aaKnown RBP12.56□□□□□ -0.4
CHPF2-201ENST00000035307 AGPSO00116 658 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 APOL1O14791 398 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 MSCO60682 206 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 OR4Q2P0C623 313 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 RARGP13631 454 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 PECAM1P16284 738 aaPredicted RBP12.56□□□□□ -0.4
CHPF2-201ENST00000035307 GCKP35557 465 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 SOX11P35716 441 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 CAV1Q03135 178 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 EML3Q32P44 896 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 ARHGAP24Q8N264 748 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 TLK1Q9UKI8 766 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 CHUKO15111 745 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 ALDH18A1P54886 795 aaKnown RBP12.56□□□□□ -0.4
CHPF2-201ENST00000035307 INHBEP58166 350 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 ASPHQ12797 758 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 PTK7Q13308 1070 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 PIGHQ14442 188 aaPredicted RBP12.56□□□□□ -0.4
CHPF2-201ENST00000035307 PDZD4Q76G19 769 aaPredicted RBP12.56□□□□□ -0.4
CHPF2-201ENST00000035307 CTU1Q7Z7A3 348 aaKnown RBP12.56□□□□□ -0.4
CHPF2-201ENST00000035307 ADGRF2Q8IZF7 708 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 PDCD6IPQ8WUM4 868 aaKnown RBP12.56□□□□□ -0.4
CHPF2-201ENST00000035307 TMEM176AQ96HP8 235 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 B3GALT6Q96L58 329 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 SIX2Q9NPC8 291 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 PFDN4Q9NQP4 134 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 TXLNGQ9NUQ3 528 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 UBP1Q9NZI7 540 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 UBQLN1Q9UMX0 589 aaKnown RBP12.56□□□□□ -0.4
CHPF2-201ENST00000035307 NAALADL1Q9UQQ1 740 aa12.56□□□□□ -0.4
CHPF2-201ENST00000035307 A0A0A6YYK5 440 aaPredicted RBP12.55□□□□□ -0.4
CHPF2-201ENST00000035307 E5RJQ4 531 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 NEMP1O14524 444 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 RIPK2O43353 540 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 AP1G2O75843 785 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 TYK2P29597 1187 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 AARSP49588 968 aaKnown RBP eCLIP12.55□□□□□ -0.4
CHPF2-201ENST00000035307 TAS2R40P59535 323 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 MBTD1Q05BQ5 628 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 FOXD4Q12950 439 aaPredicted RBP12.55□□□□□ -0.4
CHPF2-201ENST00000035307 ITGA7Q13683 1181 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 SLC10A6Q3KNW5 377 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 PACS2Q86VP3 889 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 FBXO36Q8NEA4 188 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 SLC7A14Q8TBB6 771 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 RXFP2Q8WXD0 754 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 ZNF560Q96MR9 790 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 FAM161BQ96MY7 647 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 NIFKQ9BYG3 293 aaKnown RBP12.55□□□□□ -0.4
CHPF2-201ENST00000035307 PDZD7Q9H5P4 517 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 ADAMTS5Q9UNA0 930 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 CCT8L1PA6NM43 557 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 DFFAO00273 331 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 HAUS5O94927 633 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 ENO1P06733 434 aaKnown RBP12.55□□□□□ -0.4
CHPF2-201ENST00000035307 IQCF3P0C7M6 154 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 CASP2P42575 452 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 PPM1FP49593 454 aaPredicted RBP12.55□□□□□ -0.4
CHPF2-201ENST00000035307 RPS6KA2Q15349 733 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 HABP4Q5JVS0 413 aaKnown RBP12.55□□□□□ -0.4
CHPF2-201ENST00000035307 CCT6BQ92526 530 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 DMAC2Q9NW81 257 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 DDX43Q9NXZ2 648 aaKnown RBP12.55□□□□□ -0.4
CHPF2-201ENST00000035307 MROH7Q68CQ1 1323 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 KIAA0391O15091 583 aaKnown RBP12.55□□□□□ -0.4
CHPF2-201ENST00000035307 OPHN1O60890 802 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 UBOX5O94941 541 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 NCAM1P13591 858 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 RFC1P35251 1148 aaPredicted RBP12.55□□□□□ -0.4
CHPF2-201ENST00000035307 ABCG1P45844 678 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 FNTAP49354 379 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 SULT1E1P49888 294 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 TSPY1Q01534 308 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 ARMC2Q8NEN0 867 aa12.55□□□□□ -0.4
CHPF2-201ENST00000035307 HELQQ8TDG4 1101 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms