RNA–Protein interactions for RNA: ENST00000023939.8

RTFDC1-201, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-201ENST00000023939 TUSC3Q13454 348 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 TFDP2Q14188 446 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 GLIPR1L2Q4G1C9 344 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 CEP85LQ5SZL2 805 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 SH3PXD2AQ5TCZ1 1133 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 KIAA0319Q5VV43 1072 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 DSTYKQ6XUX3 929 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 PIGZQ86VD9 579 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 RELL1Q8IUW5 271 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 MAP7D3Q8IWC1 876 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 C3orf58Q8NDZ4 430 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 FAM172AQ8WUF8 416 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 CFAP57Q96MR6 1250 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 SYT15Q9BQS2 421 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 TMEM109Q9BVC6 243 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 CRTAC1Q9NQ79 661 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 RGS18Q9NS28 235 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 PHF24Q9UPV7 400 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 ZNF148Q9UQR1 794 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 PTCH2Q9Y6C5 1203 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 A0A1W2PQ45 241 aaPredicted RBP14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 A0A1W2PQY0 241 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 GOLGA6L10A6NI86 522 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 EOMESO95936 686 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 CD48P09326 243 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 MYZAPP0CAP1 466 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 PCSK1P29120 753 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 ITGA8P53708 1063 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 HDAC4P56524 1084 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 FAM189BP81408 668 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 CD300LGQ6UXG3 332 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 CEP128Q6ZU80 1094 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 CROCCP2Q86T23 111 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 ACTL9Q8TC94 416 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 HSPH1Q92598 858 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 ZBTB9Q96C00 473 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 ATP6V1G3Q96LB4 118 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 PCDH9Q9HC56 1237 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 AAASQ9NRG9 546 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 ANAPC5Q9UJX4 755 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 DSEQ9UL01 958 aa14.97□□□□□ -0.01
RTFDC1-201ENST00000023939 ARHGEF37A1IGU5 675 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 C9IYK1 514 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 M0QZQ0 153 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 ODC1P11926 461 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 ACAT1P24752 427 aaKnown RBP14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 CDH6P55285 790 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 OTUD4Q01804 1114 aaKnown RBP14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 ADCY1Q08828 1119 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 DPYSL3Q14195 570 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 TIGD5Q53EQ6 642 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 MDH1BQ5I0G3 518 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 AGBL2Q5U5Z8 902 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 HIBCHQ6NVY1 386 aaPredicted RBP14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 CLEC20AQ6ZU45 233 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 STRADAQ7RTN6 431 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 GSTA5Q7RTV2 222 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 MYCBPAPQ8TBZ2 947 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 FAF2Q96CS3 445 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 FAM118BQ9BPY3 351 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 TRPV6Q9H1D0 765 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 NGRNQ9NPE2 291 aaKnown RBP14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 SAGE1Q9NXZ1 904 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 CACNG4Q9UBN1 327 aa14.96□□□□□ -0.01
RTFDC1-201ENST00000023939 CASTOR2A6NHX0 329 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 ARVCFO00192 962 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 DAB1O75553 588 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 FBXO21O94952 628 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 FAM200BP0CF97 657 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 LCP1P13796 627 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 GRK4P32298 578 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 MATKP42679 507 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 VEGFBP49765 207 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 MRPS5P82675 430 aaKnown RBP14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 SKOR1P84550 965 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 ATP11AP98196 1134 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 TRIP13Q15645 432 aaPredicted RBP14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 RAB6CQ53S08 254 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 IZUMO3Q5VZ72 239 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 DENND2CQ68D51 928 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 DCLRE1AQ6PJP8 1040 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 SLC24A5Q71RS6 500 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 RFX6Q8HWS3 928 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 PSTKQ8IV42 348 aaKnown RBP14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 CLEC4CQ8WTT0 213 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 NT5C3BQ969T7 300 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 RNF157Q96PX1 679 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 ACBD6Q9BR61 282 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 ZNF670Q9BS34 389 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 RAB6CQ9H0N0 254 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 SEMA4AQ9H3S1 761 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 STARD7Q9NQZ5 370 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 A6NNZ2 444 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 DNALI1O14645 258 aaPredicted RBP14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 COL6A1P12109 1028 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 IL4RP24394 825 aa14.95□□□□□ -0.02
RTFDC1-201ENST00000023939 MBTPS1Q14703 1052 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms