RNA–Protein interactions for RNA: ENST00000003084.10

CFTR-201, Transcript of cystic fibrosis transmembrane conductance regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CFTR, Length 6,132 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFTR-201ENST00000003084 PLCL1Q15111 1095 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 FAM110CQ1W6H9 321 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 KCTD16Q68DU8 428 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 ZC3H18Q86VM9 953 aaKnown RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 DDX42Q86XP3 938 aaKnown RBP eCLIP4.41□□□□□ -1.7
CFTR-201ENST00000003084 RIBC1Q8N443 379 aaPredicted RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 C1orf131Q8NDD1 294 aaKnown RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 BCAS4Q8TDM0 211 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 PTPRN2Q92932 1015 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 GRAMD1AQ96CP6 724 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 SYT15Q9BQS2 421 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 SH2D3AQ9BRG2 576 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 PORCNQ9H237 461 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 EVA1BQ9NVM1 165 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 THEGQ9P2T0 379 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 SMG5Q9UPR3 1016 aaKnown RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 HPSEQ9Y251 543 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 TXNDC9O14530 226 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 HGSO14964 777 aaPredicted RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 CHUKO15111 745 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 CA12O43570 354 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 FGRP09769 529 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 UBA1P22314 1058 aaKnown RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 STIP1P31948 543 aaKnown RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 TOB1P50616 345 aaPredicted RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 CRYBB1P53674 252 aaPredicted RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 ABCE1P61221 599 aaKnown RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 OVOS1Q6IE37 1185 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 VSIG10LQ86VR7 867 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 OOSP2Q86WS3 158 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 MAP4K3Q8IVH8 894 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 BRSK2Q8IWQ3 736 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 ZFPM1Q8IX07 1006 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 PPIL6Q8IXY8 311 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 CARNMT1Q8N4J0 409 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 CERS5Q8N5B7 392 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 GBP7Q8N8V2 638 aaPredicted RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 ENGASEQ8NFI3 743 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 CDC26Q8NHZ8 85 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 PABPC5Q96DU9 382 aaKnown RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 ELMO2Q96JJ3 720 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 ZNF558Q96NG5 402 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 SYT17Q9BSW7 474 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 XAB2Q9HCS7 855 aaKnown RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 GPRC5CQ9NQ84 441 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 DDX43Q9NXZ2 648 aaKnown RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 ZFATQ9P243 1243 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 TRAF3IP3Q9Y228 551 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 DRG1Q9Y295 367 aaKnown RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 DERAQ9Y315 318 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 CNTNAP2Q9UHC6 1331 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 SHPRHQ149N8 1683 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 IGF2BP3O00425 579 aaKnown RBP eCLIP4.41□□□□□ -1.7
CFTR-201ENST00000003084 SLC9A3R1O14745 358 aaPredicted RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 ATP9BO43861 1147 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 SYNCRIPO60506 623 aaKnown RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 ZMYND10O75800 440 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 RHOCP08134 193 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 ACADMP11310 421 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 BRAFP15056 766 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 TYK2P29597 1187 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 SPRP35270 261 aaPredicted RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 ARHGDIAP52565 204 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 GTF2A1P52655 376 aaPredicted RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 THEMIS2Q5TEJ8 643 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 NYAP1Q6ZVC0 841 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 TMC7Q7Z402 723 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 PDZD8Q8NEN9 1154 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 PPTC7Q8NI37 304 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 CSGALNACT1Q8TDX6 532 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 MAML1Q92585 1016 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 TTC17Q96AE7 1141 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 SKA1Q96BD8 255 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 CYFIP2Q96F07 1278 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 DNAJC7Q99615 494 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 GPR63Q9BZJ6 419 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 SENP6Q9GZR1 1112 aaPredicted RBP4.41□□□□□ -1.7
CFTR-201ENST00000003084 TBC1D13Q9NVG8 400 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 TNFSF13BQ9Y275 285 aa4.41□□□□□ -1.7
CFTR-201ENST00000003084 FAM86B1E9PN63 330 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 BAG2O95816 211 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 ASS1P00966 412 aaKnown RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 CYP1A1P04798 512 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 FAM86B2P0C5J1 330 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 RPL9P32969 192 aaKnown RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 FNTAP49354 379 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 MAP3K7CLP57077 242 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 TCEAL1Q15170 157 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 HIST2H2ACQ16777 129 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 TTLL9Q3SXZ7 439 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 PABPC1LQ4VXU2 614 aaKnown RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 HIST2H2AA3Q6FI13 130 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 TRIM65Q6PJ69 517 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 ACOT1Q86TX2 421 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 UNC93AQ86WB7 457 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 CBWD2Q8IUF1 395 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 GSPT2Q8IYD1 628 aaKnown RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 C18orf25Q96B23 403 aaPredicted RBP4.4□□□□□ -1.7
CFTR-201ENST00000003084 SERPINB11Q96P15 392 aa4.4□□□□□ -1.7
CFTR-201ENST00000003084 PI4K2AQ9BTU6 479 aa4.4□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms