RNA–Protein interactions for RNA: ENSMUST00000108531.7

Nup88-203, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,453 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-203ENSMUST00000108531 SnrpaQ62189 287 aaKnown RBP13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Vil1Q62468 827 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Arhgef18Q6P9R4 1021 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tubgcp5Q8BKN5 1024 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ppme1Q8BVQ5 386 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ttc39bQ8BYY4 617 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 GlmnQ8BZM1 596 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Upb1Q8VC97 393 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Nsmce3Q9CPR8 279 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Rpa3Q9CQ71 121 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Rec114Q9CWH4 259 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Smyd3Q9CWR2 428 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ppil2Q9D787 521 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Oma1Q9D8H7 521 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Capn7Q9R1S8 813 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Aldh18a1Q9Z110 795 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ror1Q9Z139 937 aa13.44□□□□□ -0.26
Nup88-203ENSMUST00000108531 Cdr2lA2A6T1 465 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tcp11x2A2AEI7 503 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Kpna7C0LLJ0 499 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Pdzrn4E9PUZ9 1014 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Svs3aF2Z472 265 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Spin2fJ3QPU0 254 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ift81O35594 676 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Nek2O35942 443 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Pgk1P09411 417 aaKnown RBP13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ccnb1P24860 430 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Hoxc10P31257 342 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Oog3Q3UWY1 500 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Sult1d1Q3UZZ6 295 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ddr2Q62371 854 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ino80dQ66JY2 873 aaKnown RBP13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ccnt2Q7TQK0 723 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Exoc3l1Q8BI71 739 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 BoraQ8BS90 525 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Enpp4Q8BTJ4 456 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Svs3bQ8BZH8 265 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Mrpl58Q8R035 206 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Dtwd1Q9D8U7 304 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tmod4Q9JLH8 345 aa13.43□□□□□ -0.26
Nup88-203ENSMUST00000108531 Fam171a2A2A699 822 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Maml3D4QGC2 1135 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Hsd17b14E9Q3D4 273 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Galnt4O08832 578 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Gja8P28236 440 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Alkbh5Q3TSG4 395 aaKnown RBP13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Cyp2c67Q569X9 491 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 CttnQ60598 546 aaKnown RBP13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 PrkciQ62074 595 aaKnown RBP13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Rpf1Q7TND5 349 aaKnown RBP13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Olfr299Q7TS05 330 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ip6k2Q80V72 448 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Eif2aQ8BJW6 581 aaKnown RBP13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Qsox1Q8BND5 748 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Slc9a4Q8BUE1 797 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Dcun1d2Q8BZJ7 259 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Angel2Q8K1C0 544 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Il36gQ8R460 164 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ttc8Q8VD72 515 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Olfr615Q8VGY4 313 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 TfQ921I1 697 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 MtrexQ9CZU3 1040 aaKnown RBP13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tomm20lQ9D4V6 152 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 B4galt5Q9JMK0 388 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ptpn4Q9WU22 926 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 1700064H15RikD3Z4D4 81 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Cdr1E9Q0B4 517 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Vav1P27870 845 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Stxbp5lQ5DQR4 1185 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tmcc1Q69ZZ6 649 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Naif1Q6PFD7 327 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 NostrinQ6WKZ7 506 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Dnajc6Q80TZ3 938 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 FsbpQ8BKE5 299 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Atg16l1Q8C0J2 607 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Znf428Q8C1M2 176 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Eif2b5Q8CHW4 717 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Kctd15Q8K0E1 283 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Lrp8Q924X6 996 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Grk2Q99MK8 689 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 AticQ9CWJ9 592 aaKnown RBP13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Ccdc103Q9D9P2 237 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Scyl3Q9DBQ7 735 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tbx20Q9ES03 445 aa13.42□□□□□ -0.26
Nup88-203ENSMUST00000108531 Kcng2F7A6P6 480 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Bmpr2O35607 1038 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Klrk1O54709 232 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Mmp10O55123 476 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Rps12P63323 132 aaKnown RBP13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Zbtb48Q1H9T6 681 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Pld5Q3UNN8 536 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Tab3Q571K4 716 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Trim38Q5SZ99 471 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 LbpQ61805 481 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 RfflQ6ZQM0 377 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Znf598Q80YR4 908 aaKnown RBP13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Pwp2Q8BU03 919 aaKnown RBP13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Wdr27Q8C5V5 780 aa13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Sugp1Q8CH02 643 aaKnown RBP13.41□□□□□ -0.26
Nup88-203ENSMUST00000108531 Trem2Q99NH8 227 aa13.41□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 47.7 ms