RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Pcnx4Q3UVY5 1174 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Miga1Q4QQM5 600 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 CttnQ60598 546 aaKnown RBP11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Lrrc27Q80YS5 523 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Atg4cQ811C2 458 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Chtf18Q8BIW9 969 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Pi4kbQ8BKC8 816 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Fsd1lQ8BYN5 507 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Nkiras1Q8CEC5 192 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Kbtbd4Q8R179 534 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 IrgqQ8VIM9 583 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Zdhhc7Q91WU6 308 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 WaslQ91YD9 501 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 HnrnpabQ99020 285 aaKnown RBP11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Mdm1Q9D067 708 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Efhd2Q9D8Y0 240 aaKnown RBP11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Ift22Q9DAI2 185 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Gipc1Q9Z0G0 333 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Cd320Q9Z1P5 260 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Crlf3Q9Z2L7 442 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Gm13084A2A8N0 494 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Zar1lC3VD30 291 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Gm10354K7N6A0 256 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 UncxO08934 530 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Aldh2P47738 519 aaKnown RBP11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Igsf9Q05BQ1 1179 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Sec31bQ3TZ89 1158 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 BC051142Q3V0M8 400 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Myo1dQ5SYD0 1006 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Tdrd5Q5VCS6 1040 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Scnn1aQ61180 699 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Tnfaip2Q61333 691 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Itih1Q61702 907 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 CrkQ64010 304 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Dennd2cQ6P9P8 914 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Atg14Q8CDJ3 492 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 GaleQ8R059 347 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Pacsin3Q99JB8 424 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Lman1Q9D0F3 517 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 IvdQ9JHI5 424 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Tpk1Q9R0M5 243 aa11.9□□□□□ -0.5
Ssh1-201ENSMUST00000077689 Pramef25A2ASI9 494 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ttll11A4Q9F4 727 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ttc17E9PVB5 1198 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Raph1F2Z3U3 1266 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Gm21833J3QPK1 500 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Hoxd10P28359 340 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Rps3aP97351 264 aaKnown RBP11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Nr4a2Q06219 598 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Spata18Q0P557 537 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 InscQ3HNM7 579 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 MyrflQ3UN70 904 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Nell2Q61220 819 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ctnna2Q61301 953 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Slc26a2Q62273 739 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 WaplQ65Z40 1200 aaKnown RBP11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Cdkn2aipQ8BI72 563 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Mterf2Q8BKY8 385 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Mageb18Q8BQR7 327 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Cfap36Q8C6E0 343 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Lsm14aQ8K2F8 462 aaKnown RBP11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Bbs7Q8K2G4 715 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Vmn1r213Q8R278 384 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Cdhr1Q8VHP6 859 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Q91Z58 1206 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Gadd45gip1Q9CR59 222 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Pfdn1Q9CWM4 122 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 AacsQ9D2R0 672 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Actrt2Q9D9L5 377 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Cd302Q9DCG2 228 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Lrrc74aA0A1Y7VMD6 494 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Gm7168A0AUV4 508 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Ifi207E9Q3L4 978 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Pgrmc1O55022 195 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 CopeO89079 308 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 PolP11369 1281 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Atf2P16951 487 aaKnown RBP11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Hk1P17710 974 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Snap25P60879 206 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Bop1P97452 732 aaKnown RBP11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Hk3Q3TRM8 922 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Fam183bQ5NC57 135 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Kcnj11Q61743 390 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 GnasQ6R0H7 1133 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Phf24Q80TL4 400 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Orai2Q8BH10 250 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Dyrk4Q8BI55 632 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Clasp2Q8BRT1 1286 aaKnown RBP11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Hdhd5Q91WM2 419 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Mcm8Q9CWV1 833 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Thg1lQ9CY52 298 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 NapaQ9DB05 295 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Krt7Q9DCV7 457 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Dgcr8Q9EQM6 773 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Pdpk1Q9Z2A0 559 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Spats1A2RRY8 269 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Dnaaf5B9EJR8 853 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Vmn2r103E9PWW0 856 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 Prdm14E9Q3T6 561 aa11.89□□□□□ -0.51
Ssh1-201ENSMUST00000077689 FancfE9Q5Z5 343 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms