RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Rnf168Q80XJ2 565 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Arhgap15Q811M1 481 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Trmt13Q8BYH3 481 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Dhx32Q8BZS9 744 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Syt15Q8C6N3 418 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Unc45bQ8CGY6 931 aaKnown RBP10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gga1Q8R0H9 635 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Alas1Q8VC19 642 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pcdhb1Q91Y08 818 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Afg3l1Q920A7 789 aaKnown RBP10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Drc3Q9D5E4 523 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ap2b1Q9DBG3 937 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tbx20Q9ES03 445 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 PorcnQ9JJJ7 461 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Hic1Q9R1Y5 733 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tatdn2B7ZNL9 783 aaKnown RBP10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Adgrf2E9Q4J9 644 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cops5O35864 334 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Stra6O70491 670 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Snx3O70492 162 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gnat1P20612 350 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Il1rapl1P59823 695 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ino80dQ66JY2 873 aaKnown RBP10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Galnt5Q8C102 930 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cabcoco1Q8CDT7 208 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Colgalt1Q8K297 617 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Snap47Q8R570 413 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tbrg4Q91YM4 630 aaKnown RBP10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Fgd4Q91ZT5 766 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Taf11Q99JX1 211 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 GOLGA7BQ9D428 167 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tekt1Q9DAJ2 418 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 PrccQ9EQC8 491 aaKnown RBP10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Map3k20Q9ESL4 802 aaKnown RBP10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Nfs1Q9Z1J3 459 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Igf2rQ07113 2483 aaKnown RBP10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Dpy19l4A2AJQ3 722 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ppargc1aO70343 797 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 ZfxP17012 799 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Eno3P21550 434 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tarbp2P97473 365 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Grb7Q03160 535 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Abi3bpQ59IW6 1179 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Grik1Q60934 836 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Vil1Q62468 827 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Nemp1Q6ZQE4 437 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Znf598Q80YR4 908 aaKnown RBP10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Fcho1Q8K285 873 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Wdr98Q8VC42 657 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Upb1Q8VC97 393 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Stk33Q924X7 491 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ing2Q9ESK4 281 aa10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Twf2Q9Z0P5 349 aaKnown RBP10.1□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Smok3aC0HKC8 504 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Smok3bC0HKC9 504 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Hcn2O88703 863 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Lta4hP24527 611 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rps12P63323 132 aaKnown RBP10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Serping1P97290 504 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Glt6d1Q2NKH9 311 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Trappc3lQ4KL14 181 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cfap52Q5F201 620 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Cd37Q61470 281 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tll1Q62381 1013 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 WlsQ6DID7 541 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 DgkqQ6P5E8 934 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Spata20Q80YT5 790 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 CntrobQ8CB62 887 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Ndfip2Q91ZP6 311 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Rex1bdQ9CYZ6 169 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Utp11Q9CZJ1 253 aaKnown RBP10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Scyl3Q9DBQ7 735 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Mettl7bQ9DD20 244 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Msh5Q9QUM7 833 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Atp11cQ9QZW0 1129 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Sned1Q70E20 1403 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Gm6657A0A1B0GRJ3 277 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Tnfrsf18O35714 228 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Psen1P49769 467 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Zdhhc18Q5Y5T2 380 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Xlr3cQ61806 226 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Olfr392Q7TRX6 312 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Wdr35Q8BND3 1181 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Hsdl1Q8BTX9 330 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Prr33Q8C494 260 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Nkiras1Q8CEC5 192 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Sulf1Q8K007 870 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Kdm4bQ91VY5 1086 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pcdhgb1Q91XX8 918 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 FdpsQ920E5 353 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pdk3Q922H2 415 aaKnown RBP10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Pdpk1Q9Z2A0 559 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Kpna7C0LLJ0 499 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Serpinb9O08797 374 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Nos2P29477 1144 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Hmgcs2P54869 508 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 StamP70297 548 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Samd11Q1RNF8 542 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Znf148Q61624 794 aa10.09□□□□□ -0.79
Pcdh1-201ENSMUST00000057185 Q8BHN7 327 aa10.09□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms