RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Zbtb8bQ8CII0 484 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Oxnad1Q8VE38 311 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Nkd1Q99MH6 471 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mss51Q9D5Z5 446 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tmem45a2B7ZWJ5 289 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Usp17lbE9Q9U0 468 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 PolP11369 1281 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Pon1P52430 355 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Bpifb5Q3UQ05 490 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 DaglaQ6WQJ1 1044 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Usp1Q8BJQ2 784 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Haus3Q8QZX2 570 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tex12Q9CR81 123 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Bpifb9bA2AJD1 591 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mup6A2AV72 179 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gm6408J3QNG1 320 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Bnc1O35914 961 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 UmpsP13439 481 aaKnown RBP10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 CratP47934 626 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ripk2P58801 539 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Serpina5P70458 405 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Trmt1Q3TX08 663 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Foxo6Q70KY4 559 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Olfr212Q7TS33 327 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Bpifb9aQ80XI7 591 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Dlg1Q811D0 905 aaKnown RBP10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Trmt2aQ8BNV1 574 aaKnown RBP10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Wdr98Q8VC42 657 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Akr1c20Q8VC77 323 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ddx20Q9JJY4 825 aaKnown RBP10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Morc1Q9WVL5 950 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Cep170bQ80U49 1574 aa10.16□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ppp1r36D3Z0R2 411 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 S100a6P14069 89 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Rasa2P58069 847 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 AurkaP97477 395 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Olfml2bQ3V1G4 746 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tmem270Q6UJB9 264 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Txndc5Q91W90 417 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Traf7Q922B6 594 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Nmd3Q99L48 503 aaKnown RBP10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Sv2aQ9JIS5 742 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gm28897A0A087WP44 222 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Celf5D3Z4T1 395 aaKnown RBP10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Akr1c6P70694 323 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Neto2Q8BNJ6 525 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Lsm7Q9CQQ8 103 aaKnown RBP10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 PigrO70570 771 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 B3gat3P58158 335 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gpatch4Q3TFK5 415 aaKnown RBP10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Myl6Q60605 151 aaKnown RBP10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 PnocQ64387 187 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Epha10Q8BYG9 1007 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Rprd1aQ8VDS4 312 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tagln3Q9R1Q8 199 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Kiaa0556Q8C753 1610 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ahdc1Q6PAL7 1594 aaKnown RBP10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 1700017N19RikA0A087WPJ1 469 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gm44511A0A0N4SW10 223 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 FancfE9Q5Z5 343 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 2610008E11RikG3X964 669 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Clk2O35491 499 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Atp9aO70228 1047 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 ItgalP24063 1163 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Hoxd10P28359 340 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Nedd1P33215 660 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 4930502E18RikQ14BQ3 236 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Ogfod1Q3U0K8 545 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Pde1aQ61481 565 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 DgkqQ6P5E8 934 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tmc8Q7TN58 722 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Tmc3Q7TQ69 1130 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Gadl1Q80WP8 550 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Slitrk1Q810C1 696 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Cd300ldQ8VCH2 221 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Chchd6Q91VN4 273 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Pcdhb1Q91Y08 818 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Slc39a3Q99K24 317 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Znf687Q9D2D7 1237 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Mageb3Q9D2H4 330 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Oma1Q9D8H7 521 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Smad9Q9JIW5 430 aa10.15□□□□□ -0.78
Syne1-201ENSMUST00000041639 Oas1eA0A0J9YV76 386 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gm5415E9PXF3 478 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Olfr414E9Q5P8 317 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Speer4eK7N6S8 255 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 GclcP97494 637 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tespa1Q3U132 458 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Klra6Q60653 266 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Mkrn3Q60764 544 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Dlgap3Q6PFD5 977 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Camta2Q80Y50 1208 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Zfp655Q9CZP3 541 aaKnown RBP10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tnfaip8l2Q9D8Y7 184 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Gpatch1Q9DBM1 930 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Dgcr8Q9EQM6 773 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Aldh1a3Q9JHW9 512 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Tjp3Q9QXY1 905 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Cyp4a12bA2A974 508 aa10.15□□□□□ -0.79
Syne1-201ENSMUST00000041639 Ifi213D3Z5G0 586 aa10.15□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms