RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Ttc30a2A2AKQ8 664 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Adgrf2E9Q4J9 644 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Kbtbd2G3X9X1 623 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Il3P01586 166 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 PcnaP17918 261 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Klf1P46099 358 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ndufs6P52503 116 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Scarf2P59222 833 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 D630036H23RikQ3UQD6 204 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 KizQ3UXL4 695 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ugt1a1Q63886 535 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 DgkqQ6P5E8 934 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Znf579Q80VM4 562 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Znf618Q80YY7 953 aaKnown RBP11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 ChfrQ810L3 664 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gtpbp10Q8K013 366 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Pcdhb4Q91XZ6 784 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 MmadhcQ99LS1 296 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Trmt10bQ9D075 318 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Zbed3Q9D0L1 228 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Klhl18A0A0G2JGN5 579 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 E2f6O54917 272 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mxd1P50538 227 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Map4k1P70218 827 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Hddc2Q3SXD3 199 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Eif2dQ61211 570 aaKnown RBP11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Serpinb3dQ6UKZ0 387 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Dars2Q8BIP0 653 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Haus3Q8QZX2 570 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Basp1Q91XV3 226 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ankef1Q9D2J7 775 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Atf6F6VAN0 656 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Prim2P33610 505 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Grid2ipQ0QWG9 1203 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Scube1Q6NZL8 1018 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gxylt2Q810K9 444 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Osbpl6Q8BXR9 959 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Pcdhga10Q91XY9 930 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 BrdtQ91Y44 956 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Fam162aQ9D6U8 155 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Tmbim4Q9DA39 238 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Chrac1Q9JKP8 129 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Actl7bQ9QY83 418 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Golga4Q91VW5 2238 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gm6370A0A0G2JGX9 315 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gm6309L7N481 315 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 HdcP23738 662 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ckmt1P30275 418 aaKnown RBP11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Faf1P54731 649 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 4933427I04RikQ3V053 235 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Itih3Q61704 889 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Txndc8Q69AB2 127 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Cspg5Q71M36 566 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Klhl2Q8JZP3 593 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Serpinb10Q8K1K6 397 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Nr3c2Q8VII8 978 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Fam192aQ91WE2 254 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ubxn2aQ99KJ0 258 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Polr3hQ9D2C6 204 aaKnown RBP11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 4930513O06RikQ9D549 161 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mta2Q9R190 668 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Cyb5rlB1AS42 316 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ccdc62E9PVD1 701 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Apold1E9Q0X2 246 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Gcnt3Q5JCT0 437 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Fbxo39Q5NBU5 443 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Arhgap10Q6Y5D8 786 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 NfascQ810U3 1240 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mark4Q8CIP4 752 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Guca1bQ8VBV8 201 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Rab27aQ9ERI2 221 aa11.73□□□□□ -0.53
Topbp1-201ENSMUST00000035164 2610028H24RikG5E8K1 270 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 PtgisO35074 501 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Ccndbp1Q3TVC7 356 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Zfp956Q3UZY6 572 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Psen2Q61144 448 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Hbs1lQ69ZS7 682 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Zfyve28Q6ZPK7 905 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Znf12Q7TSI0 686 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Kif19Q99PT9 997 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Bcl2l12Q9D3J3 255 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Stx12Q9ER00 274 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mup10A2BIN1 180 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mup14A2CEK7 180 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mup19A9C497 187 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mup15A9R9W0 180 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mup17B5X0G2 180 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mup8E9PVW0 235 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mup7E9QA79 235 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mup6P02762 180 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Pgk2P09041 417 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mup1P11588 180 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Mup2P11589 180 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 CnpP16330 420 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 EsrrgP62509 458 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Arhgap30Q640N3 1101 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Arhgap26Q6ZQ82 814 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Pgrmc2Q80UU9 217 aaKnown RBP11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 MslnlQ8C160 685 aa11.72□□□□□ -0.53
Topbp1-201ENSMUST00000035164 Robo4Q8C310 1012 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms