RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Krt76Q3UV17 594 aaKnown RBP23.89■■□□□ 1.42
Sh3rf1-201ENSMUST00000034060 Rd3Q8BRE0 195 aa23.89■■□□□ 1.42
Sh3rf1-201ENSMUST00000034060 TgdsQ8VDR7 355 aa23.89■■□□□ 1.42
Sh3rf1-201ENSMUST00000034060 Gtf2h1Q9DBA9 547 aa23.89■■□□□ 1.42
Sh3rf1-201ENSMUST00000034060 Traf2P39429 501 aa23.89■■□□□ 1.42
Sh3rf1-201ENSMUST00000034060 Ddhd1Q80YA3 547 aa23.89■■□□□ 1.42
Sh3rf1-201ENSMUST00000034060 Gm8113E0CXS8 587 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Olfr67F8VPJ8 320 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Gm5160F8VPN3 147 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Rgs2O08849 211 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Fgfr4Q03142 799 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Pi4kbQ8BKC8 816 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Dnali1Q8BVN8 258 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Inpp5bQ8K337 993 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Flt1P35969 1333 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Rhbdl2A2AGA4 302 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Pde8aO88502 823 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Rcsd1Q3UZA1 412 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 SvoplQ6PDF3 494 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Olfr297Q7TS07 310 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Polr2eQ80UW8 210 aaKnown RBP23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Olfr397Q8VEZ6 315 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Hmg20aQ9DC33 346 aa23.89■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Ankrd63A2ARS0 390 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Mpp3O88910 568 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Psmd7P26516 321 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Rpl5P47962 297 aaKnown RBP23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 HadhaQ8BMS1 763 aaKnown RBP23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Tbrg4Q91YM4 630 aaKnown RBP23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Pcyox1Q9CQF9 505 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Spata1Q9D5R4 444 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Gpatch1Q9DBM1 930 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Msh5Q9QUM7 833 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Tsc22d3Q9Z2S7 137 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Atf6F6VAN0 656 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Hmox2O70252 315 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Bcat1P24288 386 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Rtl3Q6P1Y1 553 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Tdpoz3Q717B4 365 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Med24Q99K74 987 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Sh2d3cQ9QZS8 854 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Kcnd2Q9Z0V2 630 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Arih1Q9Z1K5 555 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Knl1Q66JQ7 1612 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Scp2P32020 547 aaKnown RBP23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Ptpn5P54830 541 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 4933427I04RikQ3V053 235 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Tmem82Q8R115 356 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Tlr9Q9EQU3 1032 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Lilra5D3Z7A9 295 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Gm17093F6XGJ4 214 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 CcnoP0C242 352 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Myo19Q5SV80 963 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Mical2Q8BML1 960 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Abraxas1Q8BPZ8 407 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Rps6kl1Q8R2S1 544 aa23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Serbp1Q9CY58 407 aaKnown RBP23.88■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Gm28168A0A087WNP1 180 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Vmn2r104E9Q2J5 860 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 PtproE9Q612 1226 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 PolP11369 1281 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 PrkceP16054 737 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Proser1Q5PRE5 913 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Ubap1Q8BH48 502 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Osbpl2Q8BX94 484 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 E2f4Q8R0K9 410 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Actrt1Q9D9J3 376 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Vmn2r74E9PW21 853 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 CartptP56388 129 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 HpcaP84075 193 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Cdk7Q03147 346 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Ceacam5Q3UKK2 947 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Fam167aQ6P1G6 215 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Rsbn1Q80T69 795 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Taf2Q8C176 1104 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Stk4Q9JI11 487 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Bmp15Q9Z0L4 392 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Tbkbp1A2A9T0 611 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Pola2P33611 600 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Hist2h2acQ64523 129 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Hist2h2aa1Q6GSS7 130 aaKnown RBP23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Prl7b1Q8CGZ9 251 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Mrps15Q9DC71 258 aaKnown RBP23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Tmem45a2B7ZWJ5 289 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 NuggcD3YWJ0 796 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 H2-Eb1P04230 264 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Dnal1Q05A62 190 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Inf2Q0GNC1 1273 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Olfr301Q7TS04 311 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Gadl1Q80WP8 550 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Smarcal1Q8BJL0 910 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Trex1Q91XB0 314 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Fam187aQ9D3R5 417 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 WapP01173 134 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Smyd1P97443 490 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Pla2g4dQ50L43 825 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Exoc3l4Q6DIA2 721 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Vmn1r218Q8R261 298 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 BsndQ8VIM4 307 aa23.87■■□□□ 1.41
Sh3rf1-201ENSMUST00000034060 Cep97Q9CZ62 856 aa23.87■■□□□ 1.41
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms