RNA–Protein interactions for RNA: YOR048C

RAT1, Transcript of Nuclear 5' to 3' single-stranded RNA exonuclease, yeastyeast

Gene RAT1, Length 3,021 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RAT1YOR048C MSN1P22148 382 aa3.91□□□□□ -1.78
RAT1YOR048C RTG1P32607 177 aa3.91□□□□□ -1.78
RAT1YOR048C MRPL24P36525 258 aaPredicted RBP3.91□□□□□ -1.78
RAT1YOR048C YDR119W-AQ2V2P9 66 aa3.9□□□□□ -1.79
RAT1YOR048C AIR2Q12476 344 aaKnown RBP3.89□□□□□ -1.79
RAT1YOR048C SVP26P38869 228 aa3.89□□□□□ -1.79
RAT1YOR048C ARC15P40518 154 aaRIP-Chip data3.89□□□□□ -1.79not detected
RAT1YOR048C RGM1Q00453 211 aa3.89□□□□□ -1.79
RAT1YOR048C COF1Q03048 143 aaKnown RBP3.89□□□□□ -1.79
RAT1YOR048C YLR281CQ05863 155 aa3.89□□□□□ -1.79
RAT1YOR048C YFL041W-AQ3E817 63 aa3.89□□□□□ -1.79
RAT1YOR048C MPC3P53311 146 aa3.89□□□□□ -1.79
RAT1YOR048C PMP3P87284 55 aa3.89□□□□□ -1.79
RAT1YOR048C YDR029WQ12111 104 aa3.89□□□□□ -1.79
RAT1YOR048C YDR381C-AQ3E6R5 114 aa3.89□□□□□ -1.79
RAT1YOR048C SMP1P38128 452 aa3.88□□□□□ -1.79
RAT1YOR048C YPS5P53057 165 aa3.88□□□□□ -1.79
RAT1YOR048C VAM10Q08474 114 aa3.88□□□□□ -1.79
RAT1YOR048C YLL006W-AQ3E814 58 aa3.88□□□□□ -1.79
RAT1YOR048C CCW14O13547 238 aa3.88□□□□□ -1.79
RAT1YOR048C UBC5P15732 148 aa3.87□□□□□ -1.79
RAT1YOR048C ALG13P53178 202 aa3.87□□□□□ -1.79
RAT1YOR048C YLR415CO13578 112 aa3.87□□□□□ -1.79
RAT1YOR048C COX14P39103 70 aa3.87□□□□□ -1.79
RAT1YOR048C YBL081WP38180 368 aaKnown RBP3.87□□□□□ -1.79
RAT1YOR048C ENV10Q99382 181 aa3.87□□□□□ -1.79
RAT1YOR048C YHL018WP38744 120 aaPredicted RBP3.86□□□□□ -1.79
RAT1YOR048C YDL186WP48568 277 aa3.86□□□□□ -1.79
RAT1YOR048C KRE1P17260 313 aa3.86□□□□□ -1.79
RAT1YOR048C QCR8P08525 94 aa3.85□□□□□ -1.79
RAT1YOR048C RPL2AP0CX45 254 aaKnown RBP3.85□□□□□ -1.79
RAT1YOR048C RPL2BP0CX46 254 aaKnown RBP3.85□□□□□ -1.79
RAT1YOR048C RPB9P27999 122 aa3.85□□□□□ -1.79
RAT1YOR048C YCH1P42937 148 aa3.85□□□□□ -1.79
RAT1YOR048C RPL38P49167 78 aaKnown RBP3.85□□□□□ -1.79
RAT1YOR048C SMD1Q02260 146 aaPredicted RBP3.85□□□□□ -1.79
RAT1YOR048C DIF1O13577 133 aa3.84□□□□□ -1.79
RAT1YOR048C YLR285C-AQ3E771 56 aa3.84□□□□□ -1.79
RAT1YOR048C RRT15Q3E811 62 aa3.84□□□□□ -1.8
RAT1YOR048C YJR107C-AP0CT86 78 aa3.83□□□□□ -1.8
RAT1YOR048C IRC21Q04772 201 aa3.83□□□□□ -1.8
RAT1YOR048C SPO24Q3E752 67 aa3.83□□□□□ -1.8
RAT1YOR048C YCR085WP25650 117 aa3.83□□□□□ -1.8
RAT1YOR048C MSA2P36157 363 aa3.83□□□□□ -1.8
RAT1YOR048C MPC2P38857 129 aa3.83□□□□□ -1.8
RAT1YOR048C UBC11P52492 156 aa3.83□□□□□ -1.8
RAT1YOR048C SAP30P38429 201 aa3.82□□□□□ -1.8
RAT1YOR048C YAL064WP39711 94 aa3.82□□□□□ -1.8
RAT1YOR048C RPR2P40571 144 aa3.82□□□□□ -1.8
RAT1YOR048C YAL065CO13511 128 aa3.82□□□□□ -1.8
RAT1YOR048C CRC1Q12289 327 aa3.81□□□□□ -1.8
RAT1YOR048C YLR156WP0CE96 114 aa3.81□□□□□ -1.8
RAT1YOR048C YLR159WP0CE97 114 aa3.81□□□□□ -1.8
RAT1YOR048C YLR161WP0CE98 114 aa3.81□□□□□ -1.8
RAT1YOR048C EMC6Q12431 108 aa3.81□□□□□ -1.8
RAT1YOR048C YHL042WP38729 150 aa3.8□□□□□ -1.8
RAT1YOR048C RPL43AP0CX25 92 aaKnown RBP3.8□□□□□ -1.8
RAT1YOR048C RPL43BP0CX26 92 aa3.8□□□□□ -1.8
RAT1YOR048C YLR236CA0A023PZG4 107 aa3.79□□□□□ -1.8
RAT1YOR048C YMR122W-AQ3E842 84 aa3.78□□□□□ -1.8
RAT1YOR048C YFR009W-AP0C5M9 85 aa3.78□□□□□ -1.8
RAT1YOR048C YRA2P36036 203 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
RAT1YOR048C COX12Q01519 83 aa3.78□□□□□ -1.8
RAT1YOR048C RDS3Q06835 107 aaPredicted RBP3.78□□□□□ -1.8
RAT1YOR048C RPL11AP0C0W9 174 aaKnown RBP3.77□□□□□ -1.81
RAT1YOR048C YMR320WQ04897 101 aa3.77□□□□□ -1.81
RAT1YOR048C YLR361C-AQ3E795 98 aa3.77□□□□□ -1.81
RAT1YOR048C MVB12P42939 101 aa3.76□□□□□ -1.81
RAT1YOR048C RPL11BQ3E757 174 aaPredicted RBP3.76□□□□□ -1.81
RAT1YOR048C YPL038W-AQ3E7B4 63 aa3.76□□□□□ -1.81
RAT1YOR048C YSY6P38374 65 aa3.76□□□□□ -1.81
RAT1YOR048C IGD1P43598 195 aa3.76□□□□□ -1.81
RAT1YOR048C YOL014WQ08110 124 aa3.76□□□□□ -1.81
RAT1YOR048C YDR274CP87283 123 aa3.76□□□□□ -1.81
RAT1YOR048C YER145C-AA0A023PYF4 145 aa3.75□□□□□ -1.81
RAT1YOR048C YER187WP40102 141 aa3.75□□□□□ -1.81
RAT1YOR048C ATP18P81450 59 aa3.75□□□□□ -1.81
RAT1YOR048C ECM12O13529 151 aa3.74□□□□□ -1.81
RAT1YOR048C RSM18P40033 138 aa3.73□□□□□ -1.81
RAT1YOR048C YER039C-AP0CD97 72 aa3.73□□□□□ -1.81
RAT1YOR048C YDR246W-AQ3E763 66 aa3.73□□□□□ -1.81
RAT1YOR048C YNL162W-AQ3E7A8 72 aa3.73□□□□□ -1.81
RAT1YOR048C YOR020W-AQ3E824 90 aa3.73□□□□□ -1.81
RAT1YOR048C AQY2P0CD90 149 aa3.73□□□□□ -1.81
RAT1YOR048C YBR144CP34215 104 aa3.73□□□□□ -1.81
RAT1YOR048C ICY1Q04329 127 aa3.73□□□□□ -1.81
RAT1YOR048C YDR115WQ04598 105 aa3.72□□□□□ -1.81
RAT1YOR048C YCR050CP25630 102 aa3.72□□□□□ -1.81
RAT1YOR048C MLF3P32047 452 aa3.71□□□□□ -1.81
RAT1YOR048C YIR021W-AQ3E739 70 aa3.71□□□□□ -1.81
RAT1YOR048C NOP10Q6Q547 58 aaPredicted RBP3.71□□□□□ -1.81
RAT1YOR048C ICS3P47034 131 aa3.7□□□□□ -1.82
RAT1YOR048C ERI1P62651 68 aaKnown RBP3.7□□□□□ -1.82
RAT1YOR048C YAR023CD6VPM8 179 aa3.7□□□□□ -1.82
RAT1YOR048C ATP20Q12233 115 aa3.7□□□□□ -1.82
RAT1YOR048C YGR240C-AQ3E786 66 aa3.7□□□□□ -1.82
RAT1YOR048C YCL042WP25572 119 aa3.7□□□□□ -1.82
RAT1YOR048C YLL066W-BQ8TGJ7 56 aa3.7□□□□□ -1.82
RAT1YOR048C YJL127C-BQ3E828 52 aa3.69□□□□□ -1.82
RAT1YOR048C TDA2P40045 126 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 60 ms