RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W CHC1P22137 1653 aaKnown RBP1.98□□□□□ -2.09
UBP8YMR223W IQG1Q12280 1495 aa1.98□□□□□ -2.09
UBP8YMR223W YGL014C-AP0C5N1 53 aa1.98□□□□□ -2.09
UBP8YMR223W SRB8P25648 1427 aa1.98□□□□□ -2.09
UBP8YMR223W YBR292CP38357 123 aa1.98□□□□□ -2.09
UBP8YMR223W ATX1P38636 73 aa1.97□□□□□ -2.09
UBP8YMR223W YHL037CP38733 133 aa1.97□□□□□ -2.09
UBP8YMR223W YHR007C-AQ07074 71 aa1.97□□□□□ -2.09
UBP8YMR223W YCR095W-AQ3E787 52 aa1.97□□□□□ -2.09
UBP8YMR223W UBR2Q07963 1872 aa1.97□□□□□ -2.09
UBP8YMR223W YEL008WP40001 126 aa1.96□□□□□ -2.1
UBP8YMR223W YNL198CP40166 100 aa1.96□□□□□ -2.1
UBP8YMR223W SPC1P46965 94 aa1.96□□□□□ -2.1
UBP8YMR223W LSM6Q06406 86 aaKnown RBP1.96□□□□□ -2.1
UBP8YMR223W TY3B-GQ99315 1547 aa1.95□□□□□ -2.1
UBP8YMR223W PAU6P0CE90 120 aa1.95□□□□□ -2.1
UBP8YMR223W PAU18P0CE91 120 aa1.95□□□□□ -2.1
UBP8YMR223W YHR214C-DP0CX93 97 aa1.95□□□□□ -2.1
UBP8YMR223W MRP17P28778 131 aa1.95□□□□□ -2.1
UBP8YMR223W SED1Q01589 338 aa1.95□□□□□ -2.1
UBP8YMR223W YMR122CQ03879 124 aa1.95□□□□□ -2.1
UBP8YMR223W USO1P25386 1790 aa1.95□□□□□ -2.1
UBP8YMR223W BEM2P39960 2167 aaKnown RBP1.95□□□□□ -2.1
UBP8YMR223W PFY1P07274 126 aa1.94□□□□□ -2.1
UBP8YMR223W YIL163CP40448 117 aa1.94□□□□□ -2.1
UBP8YMR223W YMR321CQ04898 105 aa1.94□□□□□ -2.1
UBP8YMR223W YOR343CQ12484 108 aa1.94□□□□□ -2.1
UBP8YMR223W MHF2Q3E829 80 aa1.94□□□□□ -2.1
UBP8YMR223W YIL134C-AQ45U18 67 aa1.94□□□□□ -2.1
UBP8YMR223W MLP2P40457 1679 aa1.94□□□□□ -2.1
UBP8YMR223W TIM12P32830 109 aa1.93□□□□□ -2.1
UBP8YMR223W PDX3P38075 228 aaKnown RBP1.93□□□□□ -2.1
UBP8YMR223W VAM10Q08474 114 aa1.93□□□□□ -2.1
UBP8YMR223W YPL038W-AQ3E7B4 63 aa1.93□□□□□ -2.1
UBP8YMR223W RRP5Q05022 1729 aaKnown RBP1.93□□□□□ -2.1
UBP8YMR223W BUD3P25558 1636 aa1.93□□□□□ -2.1
UBP8YMR223W RPL33AP05744 107 aaKnown RBP1.92□□□□□ -2.1
UBP8YMR223W YBL071CP38185 102 aa1.92□□□□□ -2.1
UBP8YMR223W DSE2P38844 325 aa1.92□□□□□ -2.1
UBP8YMR223W VPS55P47111 140 aa1.92□□□□□ -2.1
UBP8YMR223W PAU23Q07987 124 aa1.92□□□□□ -2.1
UBP8YMR223W PAU17Q12370 124 aa1.92□□□□□ -2.1
UBP8YMR223W YFL041W-AQ3E817 63 aa1.92□□□□□ -2.1
UBP8YMR223W CCW14O13547 238 aa1.91□□□□□ -2.1
UBP8YMR223W YSF3P0C074 85 aaPredicted RBP1.91□□□□□ -2.1
UBP8YMR223W MRPS12P53732 153 aa1.91□□□□□ -2.1
UBP8YMR223W YDR210WQ03482 75 aa1.91□□□□□ -2.1
UBP8YMR223W YNR034W-AQ3E841 98 aa1.91□□□□□ -2.1
UBP8YMR223W STT4P37297 1900 aa1.91□□□□□ -2.1
UBP8YMR223W YER188C-AP0C0V2 99 aa1.91□□□□□ -2.1
UBP8YMR223W SNA2P56508 79 aa1.91□□□□□ -2.1
UBP8YMR223W CCW12Q12127 133 aa1.91□□□□□ -2.1
UBP8YMR223W YCL048W-AQ2V2Q2 79 aa1.91□□□□□ -2.1
UBP8YMR223W IML1P47170 1584 aa1.9□□□□□ -2.1
UBP8YMR223W YCL042WP25572 119 aa1.9□□□□□ -2.11
UBP8YMR223W MRX7P53869 86 aa1.9□□□□□ -2.11
UBP8YMR223W IRC21Q04772 201 aa1.9□□□□□ -2.11
UBP8YMR223W LCL2Q08045 131 aa1.9□□□□□ -2.11
UBP8YMR223W YOR105WQ08504 108 aa1.9□□□□□ -2.11
UBP8YMR223W YOR314WQ12506 109 aa1.9□□□□□ -2.11
UBP8YMR223W VMA9Q3E7B6 73 aa1.9□□□□□ -2.11
UBP8YMR223W YGR121W-AQ3E816 71 aa1.9□□□□□ -2.11
UBP8YMR223W YBT1P32386 1661 aa1.89□□□□□ -2.11
UBP8YMR223W FKS3Q04952 1785 aa1.89□□□□□ -2.11
UBP8YMR223W PAU8P0CE92 120 aa1.89□□□□□ -2.11
UBP8YMR223W PAU11P0CE93 120 aa1.89□□□□□ -2.11
UBP8YMR223W PAU13P38725 120 aa1.89□□□□□ -2.11
UBP8YMR223W PAU4P53427 120 aa1.89□□□□□ -2.11
UBP8YMR223W PAU10Q03050 120 aa1.89□□□□□ -2.11
UBP8YMR223W PAU9Q3E770 120 aa1.89□□□□□ -2.11
UBP8YMR223W ACC1Q00955 2233 aaKnown RBP1.89□□□□□ -2.11
UBP8YMR223W NUP188P52593 1655 aaKnown RBP1.89□□□□□ -2.11
UBP8YMR223W YAL065CO13511 128 aa1.88□□□□□ -2.11
UBP8YMR223W MRPL31P14063 131 aaPredicted RBP1.88□□□□□ -2.11
UBP8YMR223W MPC2P38857 129 aa1.88□□□□□ -2.11
UBP8YMR223W COX12Q01519 83 aa1.88□□□□□ -2.11
UBP8YMR223W COA3Q3E7B2 85 aa1.88□□□□□ -2.11
UBP8YMR223W PMD1P32634 1753 aa1.88□□□□□ -2.11
UBP8YMR223W TOM1Q03280 3268 aa1.87□□□□□ -2.11
UBP8YMR223W SLH1P53327 1967 aaKnown RBP1.87□□□□□ -2.11
UBP8YMR223W PAU1P0CE88 120 aa1.87□□□□□ -2.11
UBP8YMR223W PAU14P0CE89 120 aa1.87□□□□□ -2.11
UBP8YMR223W YIL156W-BQ2V2P4 73 aa1.87□□□□□ -2.11
UBP8YMR223W VMR1P38735 1592 aa1.86□□□□□ -2.11
UBP8YMR223W YLR255CO13574 117 aa1.86□□□□□ -2.11
UBP8YMR223W YLR162WQ06235 118 aa1.86□□□□□ -2.11
UBP8YMR223W COX19Q3E731 98 aa1.86□□□□□ -2.11
UBP8YMR223W YBR219CP38317 127 aa1.85□□□□□ -2.11
UBP8YMR223W TY4B-HP0C2J7 1802 aa1.85□□□□□ -2.11
UBP8YMR223W RPS11AP0CX47 156 aaKnown RBP1.84□□□□□ -2.11
UBP8YMR223W RPS11BP0CX48 156 aaKnown RBP1.84□□□□□ -2.11
UBP8YMR223W PAU20Q08322 120 aa1.84□□□□□ -2.11
UBP8YMR223W YDR010CQ12426 110 aa1.84□□□□□ -2.11
UBP8YMR223W YIL102C-AQ2V2P5 75 aa1.84□□□□□ -2.11
UBP8YMR223W YGR035W-AQ45U48 73 aa1.84□□□□□ -2.11
UBP8YMR223W TY4B-JP47024 1803 aa1.84□□□□□ -2.12
UBP8YMR223W QCR9P22289 66 aa1.83□□□□□ -2.12
UBP8YMR223W YHR173CP38864 112 aa1.83□□□□□ -2.12
UBP8YMR223W BSC4P53841 131 aa1.83□□□□□ -2.12
UBP8YMR223W YKL065W-AQ2V2P2 73 aa1.83□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms