RNA–Protein interactions for RNA: YLR403W

SFP1, Transcript of Regulates transcription of ribosomal protein and biogenesis genes, yeastyeast

Gene SFP1, Length 2,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFP1YLR403W YGR035W-AQ45U48 73 aa6.93□□□□□ -1.3
SFP1YLR403W YER188C-AP0C0V2 99 aa6.92□□□□□ -1.3
SFP1YLR403W YMR122CQ03879 124 aa6.92□□□□□ -1.3
SFP1YLR403W OST5Q92316 86 aa6.92□□□□□ -1.3
SFP1YLR403W MPC3P53311 146 aa6.91□□□□□ -1.3
SFP1YLR403W SRL1Q08673 210 aa6.91□□□□□ -1.3
SFP1YLR403W YBR182C-AQ8TGU6 64 aa6.91□□□□□ -1.3
SFP1YLR403W YMR141CP40211 102 aa6.91□□□□□ -1.3
SFP1YLR403W DAD4P69851 72 aa6.91□□□□□ -1.3
SFP1YLR403W YBL071CP38185 102 aa6.9□□□□□ -1.3
SFP1YLR403W YKL097CP34245 136 aa6.89□□□□□ -1.31
SFP1YLR403W NOP10Q6Q547 58 aaPredicted RBP6.88□□□□□ -1.31
SFP1YLR403W MRPS12P53732 153 aa6.88□□□□□ -1.31
SFP1YLR403W TOS6P48560 102 aa6.87□□□□□ -1.31
SFP1YLR403W YLR012CQ07927 99 aa6.87□□□□□ -1.31
SFP1YLR403W YKL065W-AQ2V2P2 73 aa6.87□□□□□ -1.31
SFP1YLR403W YPR153WQ06537 140 aa6.86□□□□□ -1.31
SFP1YLR403W MRPL39P36533 70 aa6.86□□□□□ -1.31
SFP1YLR403W IRC21Q04772 201 aa6.86□□□□□ -1.31
SFP1YLR403W YFR032C-BQ8TGU2 87 aa6.86□□□□□ -1.31
SFP1YLR403W YAL064W-BO13512 126 aa6.85□□□□□ -1.31
SFP1YLR403W SHU1P38751 150 aa6.85□□□□□ -1.31
SFP1YLR403W RPS23AP0CX29 145 aaKnown RBP6.85□□□□□ -1.31
SFP1YLR403W RPS23BP0CX30 145 aa6.85□□□□□ -1.31
SFP1YLR403W WWM1P43582 211 aaKnown RBP6.85□□□□□ -1.31
SFP1YLR403W YGR045CP53229 120 aa6.85□□□□□ -1.31
SFP1YLR403W RPL36BO14455 100 aaKnown RBP6.83□□□□□ -1.32
SFP1YLR403W RPL36AP05745 100 aaPredicted RBP6.83□□□□□ -1.32
SFP1YLR403W YOR020W-AQ3E824 90 aa6.83□□□□□ -1.32
SFP1YLR403W ATP15P21306 62 aa6.82□□□□□ -1.32
SFP1YLR403W KRE9P39005 276 aa6.82□□□□□ -1.32
SFP1YLR403W RPR2P40571 144 aa6.82□□□□□ -1.32
SFP1YLR403W IRC19Q07843 230 aa6.82□□□□□ -1.32
SFP1YLR403W BLM10P43583 2143 aa6.82□□□□□ -1.32
SFP1YLR403W YFL015CP43578 164 aa6.81□□□□□ -1.32
SFP1YLR403W RGM1Q00453 211 aa6.81□□□□□ -1.32
SFP1YLR403W YDR461C-AQ2V2P7 80 aa6.81□□□□□ -1.32
SFP1YLR403W YDR182W-AQ3E796 67 aa6.81□□□□□ -1.32
SFP1YLR403W YOL166W-AQ8TGJ1 51 aa6.81□□□□□ -1.32
SFP1YLR403W YOL014WQ08110 124 aa6.81□□□□□ -1.32
SFP1YLR403W YGL258W-AQ3E740 77 aa6.81□□□□□ -1.32
SFP1YLR403W BPH1P25356 2167 aa6.8□□□□□ -1.32
SFP1YLR403W QCR10P37299 77 aa6.8□□□□□ -1.32
SFP1YLR403W RPS30AP0CX33 63 aaKnown RBP6.79□□□□□ -1.32
SFP1YLR403W RPS30BP0CX34 63 aaKnown RBP6.79□□□□□ -1.32
SFP1YLR403W TRS23Q03784 219 aa6.79□□□□□ -1.32
SFP1YLR403W FAS1P07149 2051 aaKnown RBP6.78□□□□□ -1.32
SFP1YLR403W FYV12Q08559 129 aa6.78□□□□□ -1.32
SFP1YLR403W FHN1P53279 174 aa6.78□□□□□ -1.32
SFP1YLR403W HOT13P36078 116 aa6.77□□□□□ -1.33
SFP1YLR403W YGL015CP33199 130 aa6.77□□□□□ -1.33
SFP1YLR403W UTH1P36135 365 aa6.77□□□□□ -1.33
SFP1YLR403W YIR020CP40575 100 aa6.77□□□□□ -1.33
SFP1YLR403W YOR034C-AQ3E735 80 aa6.77□□□□□ -1.33
SFP1YLR403W YER145C-AA0A023PYF4 145 aa6.76□□□□□ -1.33
SFP1YLR403W YMR321CQ04898 105 aa6.76□□□□□ -1.33
SFP1YLR403W CCW14O13547 238 aa6.75□□□□□ -1.33
SFP1YLR403W YOR008C-AQ3E7B9 74 aa6.74□□□□□ -1.33
SFP1YLR403W HSP150P32478 413 aa6.73□□□□□ -1.33
SFP1YLR403W ARC15P40518 154 aaRIP-Chip data6.73□□□□□ -1.33not detected
SFP1YLR403W YOR032W-AQ8TGS1 66 aa6.73□□□□□ -1.33
SFP1YLR403W YJR107C-AP0CT86 78 aa6.73□□□□□ -1.33
SFP1YLR403W YHL037CP38733 133 aa6.72□□□□□ -1.33
SFP1YLR403W REE1P40893 198 aa6.72□□□□□ -1.33
SFP1YLR403W YCR022CP25620 114 aa6.72□□□□□ -1.33
SFP1YLR403W LIP1Q03579 150 aa6.72□□□□□ -1.33
SFP1YLR403W YIL156W-BQ2V2P4 73 aa6.72□□□□□ -1.33
SFP1YLR403W YCR043CP25361 127 aa6.7□□□□□ -1.34
SFP1YLR403W URM1P40554 99 aaPredicted RBP6.7□□□□□ -1.34
SFP1YLR403W SOM1Q05676 74 aa6.7□□□□□ -1.34
SFP1YLR403W RRT1P38192 103 aa6.7□□□□□ -1.34
SFP1YLR403W SPC1P46965 94 aa6.69□□□□□ -1.34
SFP1YLR403W NCE101Q02820 53 aa6.69□□□□□ -1.34
SFP1YLR403W YMR254CQ04838 102 aa6.69□□□□□ -1.34
SFP1YLR403W YLR342W-AQ3E810 57 aa6.69□□□□□ -1.34
SFP1YLR403W RPL38P49167 78 aaKnown RBP6.68□□□□□ -1.34
SFP1YLR403W YLR111WQ12528 110 aa6.67□□□□□ -1.34
SFP1YLR403W MRPL38P35996 138 aaPredicted RBP6.66□□□□□ -1.34
SFP1YLR403W TVP23P38962 199 aa6.66□□□□□ -1.34
SFP1YLR403W EDC2P40023 145 aaPredicted RBP6.66□□□□□ -1.34
SFP1YLR403W YMR244WQ04018 355 aa6.65□□□□□ -1.35
SFP1YLR403W YLR236CA0A023PZG4 107 aa6.63□□□□□ -1.35
SFP1YLR403W ATP18P81450 59 aa6.62□□□□□ -1.35
SFP1YLR403W BRR2P32639 2163 aaKnown RBP6.61□□□□□ -1.35
SFP1YLR403W YAR023CD6VPM8 179 aa6.6□□□□□ -1.35
SFP1YLR403W YDR010CQ12426 110 aa6.6□□□□□ -1.35
SFP1YLR403W YCR095W-AQ3E787 52 aa6.6□□□□□ -1.35
SFP1YLR403W YJR146WP47174 117 aa6.59□□□□□ -1.35
SFP1YLR403W SEN1Q00416 2231 aaKnown RBP6.59□□□□□ -1.35
SFP1YLR403W YBL008W-AQ3E821 79 aa6.58□□□□□ -1.36
SFP1YLR403W GLT1Q12680 2145 aaKnown RBP6.57□□□□□ -1.36
SFP1YLR403W RPS11AP0CX47 156 aaKnown RBP6.57□□□□□ -1.36
SFP1YLR403W RPS11BP0CX48 156 aaKnown RBP6.57□□□□□ -1.36
SFP1YLR403W COX23P38824 151 aa6.56□□□□□ -1.36
SFP1YLR403W YNL042W-BQ3E7Z2 85 aa6.56□□□□□ -1.36
SFP1YLR403W QCR8P08525 94 aa6.56□□□□□ -1.36
SFP1YLR403W YFR009W-AP0C5M9 85 aa6.55□□□□□ -1.36
SFP1YLR403W MRX7P53869 86 aa6.54□□□□□ -1.36
SFP1YLR403W MRPS8Q03799 155 aa6.54□□□□□ -1.36
SFP1YLR403W YJL027CP47063 138 aaPredicted RBP6.53□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 8.3 ms