RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C CDC43P18898 376 aa6.55□□□□□ -1.36
SEC61YLR378C TOA2P32774 122 aa6.55□□□□□ -1.36
SEC61YLR378C SVP26P38869 228 aa6.55□□□□□ -1.36
SEC61YLR378C YIL102C-AQ2V2P5 75 aa6.55□□□□□ -1.36
SEC61YLR378C RTC6O14464 93 aa6.54□□□□□ -1.36
SEC61YLR378C MRP10O75012 95 aa6.54□□□□□ -1.36
SEC61YLR378C RPC10P40422 70 aa6.54□□□□□ -1.36
SEC61YLR378C RPR2P40571 144 aa6.54□□□□□ -1.36
SEC61YLR378C YNL190WP53872 204 aa6.54□□□□□ -1.36
SEC61YLR378C PBA1Q05778 276 aa6.54□□□□□ -1.36
SEC61YLR378C POP7P38291 140 aa6.53□□□□□ -1.36
SEC61YLR378C DIF1O13577 133 aa6.52□□□□□ -1.37
SEC61YLR378C NHP2P32495 156 aaPredicted RBP6.51□□□□□ -1.37
SEC61YLR378C MID2P36027 376 aa6.51□□□□□ -1.37
SEC61YLR378C YDL241WQ07738 123 aa6.51□□□□□ -1.37
SEC61YLR378C YAL065CO13511 128 aa6.5□□□□□ -1.37
SEC61YLR378C CWP2P43497 92 aa6.5□□□□□ -1.37
SEC61YLR378C ANB1P19211 157 aa6.5□□□□□ -1.37
SEC61YLR378C HYP2P23301 157 aaKnown RBP6.5□□□□□ -1.37
SEC61YLR378C YAL064WP39711 94 aa6.5□□□□□ -1.37
SEC61YLR378C YNL198CP40166 100 aa6.5□□□□□ -1.37
SEC61YLR378C LSM6Q06406 86 aaKnown RBP6.5□□□□□ -1.37
SEC61YLR378C YLL066W-BQ8TGJ7 56 aa6.5□□□□□ -1.37
SEC61YLR378C RPL11AP0C0W9 174 aaKnown RBP6.49□□□□□ -1.37
SEC61YLR378C YHR130CP38834 111 aa6.49□□□□□ -1.37
SEC61YLR378C YDR115WQ04598 105 aa6.49□□□□□ -1.37
SEC61YLR378C RPL11BQ3E757 174 aaPredicted RBP6.49□□□□□ -1.37
SEC61YLR378C YIA6P40556 373 aa6.48□□□□□ -1.37
SEC61YLR378C ABF2Q02486 183 aa6.47□□□□□ -1.37
SEC61YLR378C YLL006W-AQ3E814 58 aa6.47□□□□□ -1.37
SEC61YLR378C UBC11P52492 156 aa6.46□□□□□ -1.38
SEC61YLR378C RRT15Q3E811 62 aa6.46□□□□□ -1.38
SEC61YLR378C YOR020W-AQ3E824 90 aa6.46□□□□□ -1.38
SEC61YLR378C YAR023CD6VPM8 179 aa6.45□□□□□ -1.38
SEC61YLR378C SMD1Q02260 146 aaPredicted RBP6.45□□□□□ -1.38
SEC61YLR378C YBL081WP38180 368 aaKnown RBP6.43□□□□□ -1.38
SEC61YLR378C RGM1Q00453 211 aa6.43□□□□□ -1.38
SEC61YLR378C AQY2P0CD90 149 aa6.42□□□□□ -1.38
SEC61YLR378C MVB12P42939 101 aa6.42□□□□□ -1.38
SEC61YLR378C EOS1P53938 366 aa6.42□□□□□ -1.38
SEC61YLR378C HPA2Q06592 156 aa6.42□□□□□ -1.38
SEC61YLR378C CPR1P14832 162 aaKnown RBP6.42□□□□□ -1.38
SEC61YLR378C COX10P21592 462 aa6.42□□□□□ -1.38
SEC61YLR378C VTS1Q08831 523 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
SEC61YLR378C YBL039W-BP0C268 59 aa6.39□□□□□ -1.39
SEC61YLR378C ARO2P28777 376 aaKnown RBP6.39□□□□□ -1.39
SEC61YLR378C YFL019CP43576 117 aa6.39□□□□□ -1.39
SEC61YLR378C SNA2P56508 79 aa6.39□□□□□ -1.39
SEC61YLR378C RPL29P05747 59 aaPredicted RBP6.38□□□□□ -1.39
SEC61YLR378C HUR1P45820 110 aa6.38□□□□□ -1.39
SEC61YLR378C MRPL24P36525 258 aaPredicted RBP6.37□□□□□ -1.39
SEC61YLR378C KNH1P50112 268 aa6.37□□□□□ -1.39
SEC61YLR378C YPL229WQ99395 206 aa6.35□□□□□ -1.39
SEC61YLR378C AIM19P40502 157 aa6.34□□□□□ -1.39
SEC61YLR378C IRC21Q04772 201 aa6.34□□□□□ -1.39
SEC61YLR378C RPL26AP05743 127 aaKnown RBP6.33□□□□□ -1.4
SEC61YLR378C RPL26BP53221 127 aaKnown RBP6.33□□□□□ -1.4
SEC61YLR378C ICY1Q04329 127 aa6.33□□□□□ -1.4
SEC61YLR378C STF1P01098 86 aa6.33□□□□□ -1.4
SEC61YLR378C YDR029WQ12111 104 aa6.33□□□□□ -1.4
SEC61YLR378C YGL041C-BQ3E750 60 aa6.33□□□□□ -1.4
SEC61YLR378C Q0032Q9ZZX7 96 aa6.32□□□□□ -1.4
SEC61YLR378C YOR034C-AQ3E735 80 aa6.31□□□□□ -1.4
SEC61YLR378C YPR195CQ06594 109 aa6.3□□□□□ -1.4
SEC61YLR378C YPL257WQ08974 193 aa6.3□□□□□ -1.4
SEC61YLR378C UBC4P15731 148 aa6.29□□□□□ -1.4
SEC61YLR378C ECM12O13529 151 aa6.28□□□□□ -1.4
SEC61YLR378C YDR034C-AP0C289 58 aa6.28□□□□□ -1.4
SEC61YLR378C DSE2P38844 325 aa6.28□□□□□ -1.4
SEC61YLR378C YLR236CA0A023PZG4 107 aa6.27□□□□□ -1.41
SEC61YLR378C IGD1P43598 195 aa6.27□□□□□ -1.41
SEC61YLR378C YNL162W-AQ3E7A8 72 aa6.26□□□□□ -1.41
SEC61YLR378C PEX22P39718 180 aa6.25□□□□□ -1.41
SEC61YLR378C SMP1P38128 452 aa6.25□□□□□ -1.41
SEC61YLR378C ATX1P38636 73 aa6.25□□□□□ -1.41
SEC61YLR378C RPA12P32529 125 aaKnown RBP6.24□□□□□ -1.41
SEC61YLR378C MSA2P36157 363 aa6.24□□□□□ -1.41
SEC61YLR378C OST2P46964 130 aa6.24□□□□□ -1.41
SEC61YLR378C MPC3P53311 146 aa6.22□□□□□ -1.41
SEC61YLR378C YBR182C-AQ8TGU6 64 aa6.22□□□□□ -1.41
SEC61YLR378C YJR107C-AP0CT86 78 aa6.21□□□□□ -1.42
SEC61YLR378C FYV5P25585 152 aa6.21□□□□□ -1.42
SEC61YLR378C YBR230W-AQ3E762 66 aa6.21□□□□□ -1.42
SEC61YLR378C YLR307C-AQ3E825 87 aa6.21□□□□□ -1.42
SEC61YLR378C YJL127C-BQ3E828 52 aa6.21□□□□□ -1.42
SEC61YLR378C YNL042W-BQ3E7Z2 85 aa6.2□□□□□ -1.42
SEC61YLR378C SLO1Q3E784 85 aa6.19□□□□□ -1.42
SEC61YLR378C TSC3Q3E790 80 aa6.19□□□□□ -1.42
SEC61YLR378C YCR085WP25650 117 aa6.18□□□□□ -1.42
SEC61YLR378C SFT1P43682 97 aa6.17□□□□□ -1.42
SEC61YLR378C YGL193CP53097 103 aa6.17□□□□□ -1.42
SEC61YLR378C YER039C-AP0CD97 72 aa6.16□□□□□ -1.42
SEC61YLR378C PBI2P0CT04 75 aaKnown RBP6.16□□□□□ -1.42
SEC61YLR378C INO4P13902 151 aa6.16□□□□□ -1.42
SEC61YLR378C RUB1Q03919 77 aa6.16□□□□□ -1.42
SEC61YLR378C LCL2Q08045 131 aa6.15□□□□□ -1.43
SEC61YLR378C BET1P22804 142 aa6.14□□□□□ -1.43
SEC61YLR378C SPT4P32914 102 aaPredicted RBP6.14□□□□□ -1.43
SEC61YLR378C DDR2P89113 61 aa6.14□□□□□ -1.43
SEC61YLR378C ATP18P81450 59 aa6.13□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms