RNA–Protein interactions for RNA: YLR276C

DBP9, Transcript of DEAD-box protein required for 27S rRNA processing, yeast

Gene DBP9, Length 1,785 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DBP9	YLR276C	PGU1	P47180	361 aa		4.3	□□□□□ -1.72
DBP9	YLR276C	SRL1	Q08673	210 aa		4.3	□□□□□ -1.72
DBP9	YLR276C	YLR285C-A	Q3E771	56 aa		4.3	□□□□□ -1.72
DBP9	YLR276C	ATP15	P21306	62 aa		4.29	□□□□□ -1.72
DBP9	YLR276C	YGL034C	P53186	121 aa		4.29	□□□□□ -1.72
DBP9	YLR276C	YER078W-A	Q3E7A2	54 aa		4.29	□□□□□ -1.72
DBP9	YLR276C	NAG1	Q8TGN9	163 aa		4.29	□□□□□ -1.72
DBP9	YLR276C	POL2	P21951	2222 aa	Known RBP	4.28	□□□□□ -1.72
DBP9	YLR276C	YLR156W	P0CE96	114 aa		4.28	□□□□□ -1.72
DBP9	YLR276C	YLR159W	P0CE97	114 aa		4.28	□□□□□ -1.72
DBP9	YLR276C	YLR161W	P0CE98	114 aa		4.28	□□□□□ -1.72
DBP9	YLR276C	EDC1	P53080	175 aa	Predicted RBP	4.28	□□□□□ -1.72
DBP9	YLR276C	YOR376W-A	Q3E805	51 aa		4.28	□□□□□ -1.72
DBP9	YLR276C	YLR342W-A	Q3E810	57 aa		4.27	□□□□□ -1.73
DBP9	YLR276C	HHF1	P02309	103 aa	Known RBP	4.27	□□□□□ -1.73
DBP9	YLR276C	HUR1	P45820	110 aa		4.27	□□□□□ -1.73
DBP9	YLR276C	YDR274C	P87283	123 aa		4.27	□□□□□ -1.73
DBP9	YLR276C	ATP20	Q12233	115 aa		4.27	□□□□□ -1.73
DBP9	YLR276C	FAS1	P07149	2051 aa	Known RBP	4.26	□□□□□ -1.73
DBP9	YLR276C	YAL065C	O13511	128 aa		4.26	□□□□□ -1.73
DBP9	YLR276C	YKR045C	P36138	183 aa		4.26	□□□□□ -1.73
DBP9	YLR276C	PEX17	P40155	199 aa		4.26	□□□□□ -1.73
DBP9	YLR276C	CCW14	O13547	238 aa		4.25	□□□□□ -1.73
DBP9	YLR276C	MDM35	O60200	86 aa		4.25	□□□□□ -1.73
DBP9	YLR276C	YSF3	P0C074	85 aa	Predicted RBP	4.25	□□□□□ -1.73
DBP9	YLR276C	RPB9	P27999	122 aa		4.25	□□□□□ -1.73
DBP9	YLR276C	YBL071C	P38185	102 aa		4.25	□□□□□ -1.73
DBP9	YLR276C	SHU1	P38751	150 aa		4.25	□□□□□ -1.73
DBP9	YLR276C	YGR121W-A	Q3E816	71 aa		4.25	□□□□□ -1.73
DBP9	YLR276C	SEN1	Q00416	2231 aa	Known RBP	4.25	□□□□□ -1.73
DBP9	YLR276C	KRE9	P39005	276 aa		4.25	□□□□□ -1.73
DBP9	YLR276C	IMP2	P46972	177 aa		4.25	□□□□□ -1.73
DBP9	YLR276C	YMR295C	Q03559	197 aa		4.25	□□□□□ -1.73
DBP9	YLR276C	YLR162W	Q06235	118 aa		4.25	□□□□□ -1.73
DBP9	YLR276C	YOR008C-A	Q3E7B9	74 aa		4.25	□□□□□ -1.73
DBP9	YLR276C	RSM18	P40033	138 aa		4.24	□□□□□ -1.73
DBP9	YLR276C	YFR035C	P43608	114 aa		4.24	□□□□□ -1.73
DBP9	YLR276C	YOR381W-A	Q3E804	55 aa		4.24	□□□□□ -1.73
DBP9	YLR276C	RPL26A	P05743	127 aa	Known RBP	4.22	□□□□□ -1.73
DBP9	YLR276C	RPS27A	P35997	82 aa	Known RBP	4.22	□□□□□ -1.73
DBP9	YLR276C	RPS27B	P38711	82 aa		4.22	□□□□□ -1.73
DBP9	YLR276C	YOR314W	Q12506	109 aa		4.22	□□□□□ -1.73
DBP9	YLR276C	REE1	P40893	198 aa		4.22	□□□□□ -1.73
DBP9	YLR276C	TOS8	P53147	276 aa		4.22	□□□□□ -1.73
DBP9	YLR276C	IRC21	Q04772	201 aa		4.22	□□□□□ -1.73
DBP9	YLR276C	YOR034C-A	Q3E735	80 aa		4.22	□□□□□ -1.73
DBP9	YLR276C	YEL045C	P32616	141 aa		4.21	□□□□□ -1.74
DBP9	YLR276C	ARC15	P40518	154 aa	RIP-Chip data	4.2	□□□□□ -1.74	not detected
DBP9	YLR276C	SPG4	Q04438	115 aa		4.2	□□□□□ -1.74
DBP9	YLR276C	NOP10	Q6Q547	58 aa	Predicted RBP	4.2	□□□□□ -1.74
DBP9	YLR276C	YJR146W	P47174	117 aa		4.19	□□□□□ -1.74
DBP9	YLR276C	RPL26B	P53221	127 aa	Known RBP	4.19	□□□□□ -1.74
DBP9	YLR276C	YJL027C	P47063	138 aa	Predicted RBP	4.19	□□□□□ -1.74
DBP9	YLR276C	YDR114C	Q04597	100 aa		4.19	□□□□□ -1.74
DBP9	YLR276C	YGR035W-A	Q45U48	73 aa		4.19	□□□□□ -1.74
DBP9	YLR276C	BPH1	P25356	2167 aa		4.18	□□□□□ -1.74
DBP9	YLR276C	YOL166W-A	Q8TGJ1	51 aa		4.18	□□□□□ -1.74
DBP9	YLR276C	RGM1	Q00453	211 aa		4.17	□□□□□ -1.74
DBP9	YLR276C	YPL278C	Q08990	100 aa		4.17	□□□□□ -1.74
DBP9	YLR276C	YML100W-A	Q8TGT0	57 aa		4.17	□□□□□ -1.74
DBP9	YLR276C	YJR107C-A	P0CT86	78 aa		4.17	□□□□□ -1.74
DBP9	YLR276C	SED1	Q01589	338 aa		4.17	□□□□□ -1.74
DBP9	YLR276C	YLR236C	A0A023PZG4	107 aa		4.16	□□□□□ -1.74
DBP9	YLR276C	RPL36B	O14455	100 aa	Known RBP	4.15	□□□□□ -1.74
DBP9	YLR276C	RPL36A	P05745	100 aa	Predicted RBP	4.15	□□□□□ -1.74
DBP9	YLR276C	YHL005C	P38752	130 aa		4.15	□□□□□ -1.74
DBP9	YLR276C	YMR122C	Q03879	124 aa		4.15	□□□□□ -1.74
DBP9	YLR276C	YDR182W-A	Q3E796	67 aa		4.15	□□□□□ -1.74
DBP9	YLR276C	YER188C-A	P0C0V2	99 aa		4.14	□□□□□ -1.75
DBP9	YLR276C	MPC3	P53311	146 aa		4.14	□□□□□ -1.75
DBP9	YLR276C	YGL193C	P53097	103 aa		4.14	□□□□□ -1.75
DBP9	YLR276C	YOL160W	Q08321	113 aa		4.14	□□□□□ -1.75
DBP9	YLR276C	QCR8	P08525	94 aa		4.13	□□□□□ -1.75
DBP9	YLR276C	TSC3	Q3E790	80 aa		4.13	□□□□□ -1.75
DBP9	YLR276C	FAB1	P34756	2278 aa		4.13	□□□□□ -1.75
DBP9	YLR276C	RRT1	P38192	103 aa		4.12	□□□□□ -1.75
DBP9	YLR276C	YHL037C	P38733	133 aa		4.12	□□□□□ -1.75
DBP9	YLR276C	TDA2	P40045	126 aa		4.12	□□□□□ -1.75
DBP9	YLR276C	YDR115W	Q04598	105 aa		4.12	□□□□□ -1.75
DBP9	YLR276C	YKL065W-A	Q2V2P2	73 aa		4.12	□□□□□ -1.75
DBP9	YLR276C	OST5	Q92316	86 aa		4.12	□□□□□ -1.75
DBP9	YLR276C	RPS30A	P0CX33	63 aa	Known RBP	4.12	□□□□□ -1.75
DBP9	YLR276C	RPS30B	P0CX34	63 aa	Known RBP	4.12	□□□□□ -1.75
DBP9	YLR276C	MRPL39	P36533	70 aa		4.12	□□□□□ -1.75
DBP9	YLR276C	YGR025W	P53216	100 aa		4.12	□□□□□ -1.75
DBP9	YLR276C	ATP18	P81450	59 aa		4.12	□□□□□ -1.75
DBP9	YLR276C	YMR244W	Q04018	355 aa		4.12	□□□□□ -1.75
DBP9	YLR276C	YAL064W	P39711	94 aa		4.11	□□□□□ -1.75
DBP9	YLR276C	YPR153W	Q06537	140 aa		4.11	□□□□□ -1.75
DBP9	YLR276C	RPL38	P49167	78 aa	Known RBP	4.1	□□□□□ -1.75
DBP9	YLR276C	YDR524C-B	Q3E6R4	66 aa		4.1	□□□□□ -1.75
DBP9	YLR276C	YOR020W-A	Q3E824	90 aa		4.1	□□□□□ -1.75
DBP9	YLR276C	YIR020C	P40575	100 aa		4.09	□□□□□ -1.75
DBP9	YLR276C	YBR200W-A	Q3E755	54 aa		4.09	□□□□□ -1.75
DBP9	YLR276C	YOL085C	Q99345	113 aa		4.09	□□□□□ -1.75
DBP9	YLR276C	RPS23A	P0CX29	145 aa	Known RBP	4.09	□□□□□ -1.76
DBP9	YLR276C	RPS23B	P0CX30	145 aa		4.09	□□□□□ -1.76
DBP9	YLR276C	FPR1	P20081	114 aa	Known RBP	4.09	□□□□□ -1.76
DBP9	YLR276C	YEL008W	P40001	126 aa		4.09	□□□□□ -1.76
DBP9	YLR276C	YFR009W-A	P0C5M9	85 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 25.9 ms