RNA–Protein interactions for RNA: YKR059W

TIF1, Transcript of Translation initiation factor eIF4A, yeast

Gene TIF1, Length 1,188 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIF1	YKR059W	UPS3	Q04006	179 aa		4.1	□□□□□ -1.75
TIF1	YKR059W	VMA9	Q3E7B6	73 aa		4.1	□□□□□ -1.75
TIF1	YKR059W	YPR010C-A	A5Z2X5	72 aa		4.09	□□□□□ -1.75
TIF1	YKR059W	RPL33A	P05744	107 aa	Known RBP	4.09	□□□□□ -1.75
TIF1	YKR059W	HAP3	P13434	144 aa		4.09	□□□□□ -1.75
TIF1	YKR059W	YBR292C	P38357	123 aa		4.09	□□□□□ -1.75
TIF1	YKR059W	YHR173C	P38864	112 aa		4.09	□□□□□ -1.75
TIF1	YKR059W	SPG1	P50088	95 aa		4.09	□□□□□ -1.75
TIF1	YKR059W	ATP19	P81451	68 aa		4.09	□□□□□ -1.75
TIF1	YKR059W	FCF2	Q12035	217 aa	Predicted RBP	4.09	□□□□□ -1.75
TIF1	YKR059W	YGL194C-A	Q2V2P6	80 aa		4.09	□□□□□ -1.75
TIF1	YKR059W	YHR140W	P38842	239 aa		4.08	□□□□□ -1.76
TIF1	YKR059W	EMC5	P40540	141 aa		4.08	□□□□□ -1.76
TIF1	YKR059W	APS2	Q00381	147 aa		4.08	□□□□□ -1.76
TIF1	YKR059W	YIR021W-A	Q3E739	70 aa		4.08	□□□□□ -1.76
TIF1	YKR059W	YBR200W-A	Q3E755	54 aa		4.08	□□□□□ -1.76
TIF1	YKR059W	ATG8	P38182	117 aa	RIP-Chip data	4.07	□□□□□ -1.76	not detected
TIF1	YKR059W	DAN1	P47178	298 aa		4.07	□□□□□ -1.76
TIF1	YKR059W	YML079W	Q03629	201 aa		4.07	□□□□□ -1.76
TIF1	YKR059W	YOR381W-A	Q3E804	55 aa		4.07	□□□□□ -1.76
TIF1	YKR059W	SEC11	P15367	167 aa		4.06	□□□□□ -1.76
TIF1	YKR059W	CYT2	Q00873	224 aa		4.06	□□□□□ -1.76
TIF1	YKR059W	SEN15	Q04675	128 aa		4.06	□□□□□ -1.76
TIF1	YKR059W	YDR034C-A	P0C289	58 aa		4.05	□□□□□ -1.76
TIF1	YKR059W	ELC1	Q03071	99 aa		4.05	□□□□□ -1.76
TIF1	YKR059W	ANT1	Q06497	328 aa		4.05	□□□□□ -1.76
TIF1	YKR059W	TRS20	P38334	175 aa		4.04	□□□□□ -1.76
TIF1	YKR059W	KNH1	P50112	268 aa		4.04	□□□□□ -1.76
TIF1	YKR059W	AIM11	P87275	137 aa		4.04	□□□□□ -1.76
TIF1	YKR059W	DAD1	Q12248	94 aa		4.04	□□□□□ -1.76
TIF1	YKR059W	YMR122W-A	Q3E842	84 aa		4.04	□□□□□ -1.76
TIF1	YKR059W	DDR48	P18899	430 aa	Known RBP	4.03	□□□□□ -1.76
TIF1	YKR059W	YMR141C	P40211	102 aa		4.03	□□□□□ -1.76
TIF1	YKR059W	VMA21	P41806	77 aa		4.03	□□□□□ -1.76
TIF1	YKR059W	YNR034W-A	Q3E841	98 aa		4.03	□□□□□ -1.76
TIF1	YKR059W	YIL134C-A	Q45U18	67 aa		4.03	□□□□□ -1.76
TIF1	YKR059W	MRPL11	P36521	249 aa	Predicted RBP	4.02	□□□□□ -1.77
TIF1	YKR059W	DSE2	P38844	325 aa		4.02	□□□□□ -1.77
TIF1	YKR059W	DAD4	P69851	72 aa		4.02	□□□□□ -1.77
TIF1	YKR059W	UBC5	P15732	148 aa		4.01	□□□□□ -1.77
TIF1	YKR059W	GCV3	P39726	170 aa	Predicted RBP	4.01	□□□□□ -1.77
TIF1	YKR059W	CYB5	P40312	120 aa		4.01	□□□□□ -1.77
TIF1	YKR059W	PAU15	P40585	124 aa		4.01	□□□□□ -1.77
TIF1	YKR059W	SFT1	P43682	97 aa		4.01	□□□□□ -1.77
TIF1	YKR059W	THG1	P53215	237 aa	Known RBP	4.01	□□□□□ -1.77
TIF1	YKR059W	POP3	P53833	195 aa	Predicted RBP	4.01	□□□□□ -1.77
TIF1	YKR059W	LCL1	Q02786	101 aa		4.01	□□□□□ -1.77
TIF1	YKR059W	YJL197C-A	P0C5P0	93 aa		4	□□□□□ -1.77
TIF1	YKR059W	RPL14A	P36105	138 aa	Known RBP	4	□□□□□ -1.77
TIF1	YKR059W	RPL14B	P38754	138 aa	Known RBP	4	□□□□□ -1.77
TIF1	YKR059W	PAU23	Q07987	124 aa		4	□□□□□ -1.77
TIF1	YKR059W	PAU17	Q12370	124 aa		4	□□□□□ -1.77
TIF1	YKR059W	YDL012C	Q12489	107 aa		4	□□□□□ -1.77
TIF1	YKR059W	PAI3	P01094	68 aa		3.99	□□□□□ -1.77
TIF1	YKR059W	YHR007C-A	Q07074	71 aa		3.99	□□□□□ -1.77
TIF1	YKR059W	YLR118C	Q12354	227 aa		3.99	□□□□□ -1.77
TIF1	YKR059W	RPS22A	P0C0W1	130 aa	Known RBP	3.98	□□□□□ -1.77
TIF1	YKR059W	PAU4	P53427	120 aa		3.98	□□□□□ -1.77
TIF1	YKR059W	PMP3	P87284	55 aa		3.98	□□□□□ -1.77
TIF1	YKR059W	RRT15	Q3E811	62 aa		3.98	□□□□□ -1.77
TIF1	YKR059W	COX8	P04039	78 aa		3.97	□□□□□ -1.77
TIF1	YKR059W	UGX2	P32772	223 aa		3.97	□□□□□ -1.77
TIF1	YKR059W	YDL157C	Q12082	118 aa		3.97	□□□□□ -1.77
TIF1	YKR059W	SCS22	Q6Q595	175 aa		3.97	□□□□□ -1.77
TIF1	YKR059W	YOR105W	Q08504	108 aa		3.96	□□□□□ -1.78
TIF1	YKR059W	YLR307C-A	Q3E825	87 aa		3.96	□□□□□ -1.78
TIF1	YKR059W	PAU19	P0CE85	124 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PAU21	P0CE86	164 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PAU22	P0CE87	164 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PAU1	P0CE88	120 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PAU14	P0CE89	120 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PAU6	P0CE90	120 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PAU18	P0CE91	120 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PAU8	P0CE92	120 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PAU11	P0CE93	120 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	INO4	P13902	151 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PAU3	P25610	124 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PAU13	P38725	120 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	YHL018W	P38744	120 aa	Predicted RBP	3.95	□□□□□ -1.78
TIF1	YKR059W	YEL067C	P39978	195 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	HUA1	P40325	198 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PHS1	P40857	217 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PAU10	Q03050	120 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PAU20	Q08322	120 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	NAT5	Q08689	176 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	COX19	Q3E731	98 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	PAU9	Q3E770	120 aa		3.95	□□□□□ -1.78
TIF1	YKR059W	YHR130C	P38834	111 aa		3.94	□□□□□ -1.78
TIF1	YKR059W	KTI11	Q3E840	82 aa		3.94	□□□□□ -1.78
TIF1	YKR059W	YLR194C	Q05777	254 aa		3.93	□□□□□ -1.78
TIF1	YKR059W	YDR029W	Q12111	104 aa		3.93	□□□□□ -1.78
TIF1	YKR059W	YIL163C	P40448	117 aa		3.91	□□□□□ -1.78
TIF1	YKR059W	MRPL31	P14063	131 aa	Predicted RBP	3.9	□□□□□ -1.79
TIF1	YKR059W	RPC10	P40422	70 aa		3.9	□□□□□ -1.79
TIF1	YKR059W	MSL1	P40567	111 aa	Predicted RBP	3.9	□□□□□ -1.79
TIF1	YKR059W	PAU5	P43575	122 aa		3.9	□□□□□ -1.79
TIF1	YKR059W	HYP2	P23301	157 aa	Known RBP	3.89	□□□□□ -1.79
TIF1	YKR059W	YKR070W	P36151	352 aa	Known RBP	3.89	□□□□□ -1.79
TIF1	YKR059W	GPI19	Q04082	140 aa		3.89	□□□□□ -1.79
TIF1	YKR059W	YDL241W	Q07738	123 aa		3.89	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms