RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C TY1B-ORQ92393 1755 aa0.59□□□□□ -2.32
VPS55YJR044C PRP8P33334 2413 aaKnown RBP0.59□□□□□ -2.32
VPS55YJR044C TY1B-PR2P0C2J0 1756 aa0.58□□□□□ -2.32
VPS55YJR044C RPL43AP0CX25 92 aaKnown RBP0.58□□□□□ -2.32
VPS55YJR044C RPL43BP0CX26 92 aa0.58□□□□□ -2.32
VPS55YJR044C NHP2P32495 156 aaPredicted RBP0.58□□□□□ -2.32
VPS55YJR044C YBL071CP38185 102 aa0.58□□□□□ -2.32
VPS55YJR044C YOR343CQ12484 108 aa0.58□□□□□ -2.32
VPS55YJR044C YGL194C-AQ2V2P6 80 aa0.58□□□□□ -2.32
VPS55YJR044C MHF2Q3E829 80 aa0.58□□□□□ -2.32
VPS55YJR044C TY1B-LR3P0C2I6 1755 aaKnown RBP0.57□□□□□ -2.32
VPS55YJR044C MMS22Q06164 1454 aa0.57□□□□□ -2.32
VPS55YJR044C BLM10P43583 2143 aa0.57□□□□□ -2.32
VPS55YJR044C BSC4P53841 131 aa0.57□□□□□ -2.32
VPS55YJR044C SCP1Q08873 200 aa0.57□□□□□ -2.32
VPS55YJR044C XRN1P22147 1528 aaKnown RBP0.57□□□□□ -2.32
VPS55YJR044C ECM29P38737 1868 aa0.56□□□□□ -2.32
VPS55YJR044C TY1B-NL2Q99337 1749 aaKnown RBP0.56□□□□□ -2.32
VPS55YJR044C PAU1P0CE88 120 aa0.56□□□□□ -2.32
VPS55YJR044C PAU14P0CE89 120 aa0.56□□□□□ -2.32
VPS55YJR044C PAU6P0CE90 120 aa0.56□□□□□ -2.32
VPS55YJR044C PAU18P0CE91 120 aa0.56□□□□□ -2.32
VPS55YJR044C PAU8P0CE92 120 aa0.56□□□□□ -2.32
VPS55YJR044C PAU11P0CE93 120 aa0.56□□□□□ -2.32
VPS55YJR044C YCR085WP25650 117 aa0.56□□□□□ -2.32
VPS55YJR044C TOM6P33448 61 aa0.56□□□□□ -2.32
VPS55YJR044C PAU13P38725 120 aa0.56□□□□□ -2.32
VPS55YJR044C PAU10Q03050 120 aa0.56□□□□□ -2.32
VPS55YJR044C PAU20Q08322 120 aa0.56□□□□□ -2.32
VPS55YJR044C YKL065W-AQ2V2P2 73 aa0.56□□□□□ -2.32
VPS55YJR044C PAU9Q3E770 120 aa0.56□□□□□ -2.32
VPS55YJR044C YNR034W-AQ3E841 98 aa0.56□□□□□ -2.32
VPS55YJR044C FAS2P19097 1887 aaKnown RBP0.56□□□□□ -2.32
VPS55YJR044C SPC1P46965 94 aa0.55□□□□□ -2.32
VPS55YJR044C PAU4P53427 120 aa0.55□□□□□ -2.32
VPS55YJR044C YLR307C-AQ3E825 87 aa0.55□□□□□ -2.32
VPS55YJR044C TY1B-DR5P0C2I2 1755 aa0.55□□□□□ -2.32
VPS55YJR044C TY1B-PR1P0C2I9 1755 aaKnown RBP0.55□□□□□ -2.32
VPS55YJR044C UTP10P42945 1769 aaKnown RBP0.55□□□□□ -2.32
VPS55YJR044C TY1B-JR1P47098 1755 aa0.55□□□□□ -2.32
VPS55YJR044C TY1B-ML2Q03434 1755 aaKnown RBP0.55□□□□□ -2.32
VPS55YJR044C TY1B-ER1Q03612 1755 aa0.55□□□□□ -2.32
VPS55YJR044C TY1B-ER2Q03619 1755 aa0.55□□□□□ -2.32
VPS55YJR044C TY1B-DR1Q03855 1755 aa0.55□□□□□ -2.32
VPS55YJR044C TY1B-ML1Q04711 1755 aaKnown RBP0.55□□□□□ -2.32
VPS55YJR044C TY1B-LR1Q12088 1755 aaKnown RBP0.55□□□□□ -2.32
VPS55YJR044C TY1B-GR2Q12269 1755 aa0.55□□□□□ -2.32
VPS55YJR044C TY1B-OLQ12273 1755 aa0.55□□□□□ -2.32
VPS55YJR044C TY1B-DR3Q99231 1755 aa0.55□□□□□ -2.32
VPS55YJR044C COX7P10174 60 aa0.54□□□□□ -2.32
VPS55YJR044C YHR173CP38864 112 aa0.54□□□□□ -2.32
VPS55YJR044C YNL042W-BQ3E7Z2 85 aa0.54□□□□□ -2.32
VPS55YJR044C STT4P37297 1900 aa0.54□□□□□ -2.32
VPS55YJR044C YLR157W-EP0CF00 54 aa0.53□□□□□ -2.32
VPS55YJR044C YHR214C-DP0CX93 97 aa0.53□□□□□ -2.32
VPS55YJR044C POC4Q12245 148 aaPredicted RBP0.53□□□□□ -2.32
VPS55YJR044C YOR314WQ12506 109 aa0.53□□□□□ -2.32
VPS55YJR044C YER188C-AP0C0V2 99 aa0.52□□□□□ -2.33
VPS55YJR044C AUA1P32450 94 aa0.52□□□□□ -2.33
VPS55YJR044C YOL097W-AQ3E7Y9 61 aa0.52□□□□□ -2.33
VPS55YJR044C DOP1Q03921 1698 aa0.52□□□□□ -2.33
VPS55YJR044C APC1P53886 1748 aa0.52□□□□□ -2.33
VPS55YJR044C YAL065CO13511 128 aa0.51□□□□□ -2.33
VPS55YJR044C NUP159P40477 1460 aa0.51□□□□□ -2.33
VPS55YJR044C RPL38P49167 78 aaKnown RBP0.51□□□□□ -2.33
VPS55YJR044C YDR381C-AQ3E6R5 114 aa0.51□□□□□ -2.33
VPS55YJR044C YMR122W-AQ3E842 84 aa0.51□□□□□ -2.33
VPS55YJR044C TAO3P40468 2376 aa0.5□□□□□ -2.33
VPS55YJR044C SWM2P40342 146 aa0.5□□□□□ -2.33
VPS55YJR044C CWP2P43497 92 aa0.5□□□□□ -2.33
VPS55YJR044C YDR119W-AQ2V2P9 66 aa0.5□□□□□ -2.33
VPS55YJR044C Q0032Q9ZZX7 96 aa0.5□□□□□ -2.33
VPS55YJR044C SIN3P22579 1536 aa0.49□□□□□ -2.33
VPS55YJR044C FPR2P32472 135 aa0.49□□□□□ -2.33
VPS55YJR044C RPS29BP41058 56 aaKnown RBP0.49□□□□□ -2.33
VPS55YJR044C YNL190WP53872 204 aa0.49□□□□□ -2.33
VPS55YJR044C ATP18P81450 59 aa0.49□□□□□ -2.33
VPS55YJR044C YBR201C-AQ2V2Q3 67 aa0.49□□□□□ -2.33
VPS55YJR044C NOP10Q6Q547 58 aaPredicted RBP0.49□□□□□ -2.33
VPS55YJR044C YHR213W-AQ8TGT4 77 aa0.49□□□□□ -2.33
VPS55YJR044C HKR1P41809 1802 aa0.49□□□□□ -2.33
VPS55YJR044C TY2B-CP25384 1770 aa0.49□□□□□ -2.33
VPS55YJR044C TY2B-DR1Q12472 1770 aa0.49□□□□□ -2.33
VPS55YJR044C BPH1P25356 2167 aa0.48□□□□□ -2.33
VPS55YJR044C YOR105WQ08504 108 aa0.48□□□□□ -2.33
VPS55YJR044C PMD1P32634 1753 aa0.47□□□□□ -2.33
VPS55YJR044C YNL198CP40166 100 aa0.47□□□□□ -2.33
VPS55YJR044C EDC1P53080 175 aaPredicted RBP0.47□□□□□ -2.33
VPS55YJR044C PAU23Q07987 124 aa0.47□□□□□ -2.33
VPS55YJR044C PAU17Q12370 124 aa0.47□□□□□ -2.33
VPS55YJR044C YGR121W-AQ3E816 71 aa0.47□□□□□ -2.33
VPS55YJR044C RPO31P04051 1460 aa0.47□□□□□ -2.33
VPS55YJR044C BCK1Q01389 1478 aa0.47□□□□□ -2.33
VPS55YJR044C IML1P47170 1584 aa0.46□□□□□ -2.34
VPS55YJR044C QCR9P22289 66 aa0.46□□□□□ -2.34
VPS55YJR044C YBR032WP38223 100 aa0.46□□□□□ -2.34
VPS55YJR044C YPR145C-AQ2V2P0 78 aa0.46□□□□□ -2.34
VPS55YJR044C YIL156W-BQ2V2P4 73 aa0.46□□□□□ -2.34
VPS55YJR044C ARO1P08566 1588 aaKnown RBP0.45□□□□□ -2.34
VPS55YJR044C TY2B-LR1P0C2J3 1770 aa0.45□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 56.1 ms