RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C NHP2P32495 156 aaPredicted RBP5.48□□□□□ -1.53
SNP1YIL061C RPL33BP41056 107 aaKnown RBP5.48□□□□□ -1.53
SNP1YIL061C CWP2P43497 92 aa5.48□□□□□ -1.53
SNP1YIL061C HAL1Q01766 294 aa5.48□□□□□ -1.53
SNP1YIL061C YLR122CQ12312 125 aa5.48□□□□□ -1.53
SNP1YIL061C YPR010C-AA5Z2X5 72 aa5.47□□□□□ -1.53
SNP1YIL061C YAL065CO13511 128 aa5.47□□□□□ -1.53
SNP1YIL061C RPR2P40571 144 aa5.47□□□□□ -1.53
SNP1YIL061C UBC11P52492 156 aa5.46□□□□□ -1.54
SNP1YIL061C YMR175W-AQ3E766 64 aa5.46□□□□□ -1.54
SNP1YIL061C CDC43P18898 376 aa5.45□□□□□ -1.54
SNP1YIL061C YHR130CP38834 111 aa5.45□□□□□ -1.54
SNP1YIL061C RPC10P40422 70 aa5.45□□□□□ -1.54
SNP1YIL061C SPC1P46965 94 aa5.45□□□□□ -1.54
SNP1YIL061C YMR320WQ04897 101 aa5.45□□□□□ -1.54
SNP1YIL061C YDL241WQ07738 123 aa5.45□□□□□ -1.54
SNP1YIL061C DUT1P33317 147 aa5.44□□□□□ -1.54
SNP1YIL061C YIA6P40556 373 aa5.44□□□□□ -1.54
SNP1YIL061C EOS1P53938 366 aa5.44□□□□□ -1.54
SNP1YIL061C RGM1Q00453 211 aa5.44□□□□□ -1.54
SNP1YIL061C YLL066W-BQ8TGJ7 56 aa5.44□□□□□ -1.54
SNP1YIL061C YOR020W-AQ3E824 90 aa5.43□□□□□ -1.54
SNP1YIL061C YDR115WQ04598 105 aa5.42□□□□□ -1.54
SNP1YIL061C YLL006W-AQ3E814 58 aa5.42□□□□□ -1.54
SNP1YIL061C COX10P21592 462 aa5.4□□□□□ -1.54
SNP1YIL061C ARO2P28777 376 aaKnown RBP5.4□□□□□ -1.54
SNP1YIL061C YBL081WP38180 368 aaKnown RBP5.4□□□□□ -1.54
SNP1YIL061C DIF1O13577 133 aa5.39□□□□□ -1.55
SNP1YIL061C HPA2Q06592 156 aa5.39□□□□□ -1.55
SNP1YIL061C RTC6O14464 93 aa5.38□□□□□ -1.55
SNP1YIL061C YAL064WP39711 94 aa5.38□□□□□ -1.55
SNP1YIL061C HUR1P45820 110 aa5.38□□□□□ -1.55
SNP1YIL061C PBA1Q05778 276 aa5.38□□□□□ -1.55
SNP1YIL061C RPL29P05747 59 aaPredicted RBP5.37□□□□□ -1.55
SNP1YIL061C YRA2P36036 203 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
SNP1YIL061C MRPL24P36525 258 aaPredicted RBP5.37□□□□□ -1.55
SNP1YIL061C SVP26P38869 228 aa5.36□□□□□ -1.55
SNP1YIL061C MVB12P42939 101 aa5.35□□□□□ -1.55
SNP1YIL061C OST2P46964 130 aa5.35□□□□□ -1.55
SNP1YIL061C RUB1Q03919 77 aa5.35□□□□□ -1.55
SNP1YIL061C YPL229WQ99395 206 aa5.35□□□□□ -1.55
SNP1YIL061C YLR236CA0A023PZG4 107 aa5.34□□□□□ -1.55
SNP1YIL061C RPA12P32529 125 aaKnown RBP5.34□□□□□ -1.55
SNP1YIL061C KNH1P50112 268 aa5.34□□□□□ -1.55
SNP1YIL061C ABF2Q02486 183 aa5.34□□□□□ -1.55
SNP1YIL061C IRC21Q04772 201 aa5.34□□□□□ -1.55
SNP1YIL061C YPL257WQ08974 193 aa5.34□□□□□ -1.55
SNP1YIL061C SLO1Q3E784 85 aa5.34□□□□□ -1.55
SNP1YIL061C AQY2P0CD90 149 aa5.33□□□□□ -1.56
SNP1YIL061C ATX1P38636 73 aa5.33□□□□□ -1.56
SNP1YIL061C DSE2P38844 325 aa5.33□□□□□ -1.56
SNP1YIL061C SMD1Q02260 146 aaPredicted RBP5.33□□□□□ -1.56
SNP1YIL061C STF1P01098 86 aa5.32□□□□□ -1.56
SNP1YIL061C YFL019CP43576 117 aa5.32□□□□□ -1.56
SNP1YIL061C ICY1Q04329 127 aa5.32□□□□□ -1.56
SNP1YIL061C VTS1Q08831 523 aaKnown RBP RIP-Chip data5.32□□□□□ -1.56not detected
SNP1YIL061C YOR034C-AQ3E735 80 aa5.32□□□□□ -1.56
SNP1YIL061C RRT15Q3E811 62 aa5.32□□□□□ -1.56
SNP1YIL061C YBL039W-BP0C268 59 aa5.31□□□□□ -1.56
SNP1YIL061C MSA2P36157 363 aa5.31□□□□□ -1.56
SNP1YIL061C AIM19P40502 157 aa5.31□□□□□ -1.56
SNP1YIL061C YNL162W-AQ3E7A8 72 aa5.3□□□□□ -1.56
SNP1YIL061C MRP10O75012 95 aa5.29□□□□□ -1.56
SNP1YIL061C UBC4P15731 148 aa5.29□□□□□ -1.56
SNP1YIL061C YAR023CD6VPM8 179 aa5.28□□□□□ -1.56
SNP1YIL061C INO4P13902 151 aa5.27□□□□□ -1.57
SNP1YIL061C YCR085WP25650 117 aa5.27□□□□□ -1.57
SNP1YIL061C IGD1P43598 195 aa5.27□□□□□ -1.57
SNP1YIL061C RPL11AP0C0W9 174 aaKnown RBP5.25□□□□□ -1.57
SNP1YIL061C YDR381C-AQ3E6R5 114 aa5.25□□□□□ -1.57
SNP1YIL061C RPL11BQ3E757 174 aaPredicted RBP5.25□□□□□ -1.57
SNP1YIL061C YLR307C-AQ3E825 87 aa5.25□□□□□ -1.57
SNP1YIL061C RPL26AP05743 127 aaKnown RBP5.24□□□□□ -1.57
SNP1YIL061C RPL26BP53221 127 aaKnown RBP5.24□□□□□ -1.57
SNP1YIL061C MPC3P53311 146 aa5.24□□□□□ -1.57
SNP1YIL061C PBI2P0CT04 75 aaKnown RBP5.23□□□□□ -1.57
SNP1YIL061C YJR107C-AP0CT86 78 aa5.23□□□□□ -1.57
SNP1YIL061C SNA2P56508 79 aa5.23□□□□□ -1.57
SNP1YIL061C MDN1Q12019 4910 aaKnown RBP5.22□□□□□ -1.57
SNP1YIL061C SMP1P38128 452 aa5.22□□□□□ -1.57
SNP1YIL061C SKI6P46948 246 aaPredicted RBP5.22□□□□□ -1.57
SNP1YIL061C ISD11Q6Q560 94 aa5.22□□□□□ -1.57
SNP1YIL061C YGL041C-BQ3E750 60 aa5.21□□□□□ -1.58
SNP1YIL061C YAL063C-AQ3E791 96 aa5.21□□□□□ -1.58
SNP1YIL061C YIL002W-AQ3E7Z5 69 aa5.21□□□□□ -1.58
SNP1YIL061C FYV5P25585 152 aa5.2□□□□□ -1.58
SNP1YIL061C GAT4P40569 121 aa5.2□□□□□ -1.58
SNP1YIL061C YDR029WQ12111 104 aa5.2□□□□□ -1.58
SNP1YIL061C YBR230W-AQ3E762 66 aa5.2□□□□□ -1.58
SNP1YIL061C Q0032Q9ZZX7 96 aa5.2□□□□□ -1.58
SNP1YIL061C YJL127C-BQ3E828 52 aa5.19□□□□□ -1.58
SNP1YIL061C ECM12O13529 151 aa5.18□□□□□ -1.58
SNP1YIL061C YFL065CP43539 102 aa5.18□□□□□ -1.58
SNP1YIL061C ATP18P81450 59 aa5.18□□□□□ -1.58
SNP1YIL061C YPR203WQ08994 102 aa5.18□□□□□ -1.58
SNP1YIL061C YNL042W-BQ3E7Z2 85 aa5.18□□□□□ -1.58
SNP1YIL061C KRE1P17260 313 aa5.17□□□□□ -1.58
SNP1YIL061C PEX22P39718 180 aa5.17□□□□□ -1.58
SNP1YIL061C SFT1P43682 97 aa5.17□□□□□ -1.58
SNP1YIL061C YPR195CQ06594 109 aa5.17□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 53.4 ms