RNA–Protein interactions for RNA: YIL021W

RPB3, Transcript of RNA polymerase II third largest subunit B44, yeastyeast

Gene RPB3, Length 957 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB3YIL021W RPS8BP0CX40 200 aaKnown RBP2.89□□□□□ -1.95
RPB3YIL021W RPL16BP26785 198 aaKnown RBP2.89□□□□□ -1.95
RPB3YIL021W YHL018WP38744 120 aaPredicted RBP2.89□□□□□ -1.95
RPB3YIL021W SKI6P46948 246 aaPredicted RBP2.89□□□□□ -1.95
RPB3YIL021W YJR146WP47174 117 aa2.89□□□□□ -1.95
RPB3YIL021W YMR244WQ04018 355 aa2.89□□□□□ -1.95
RPB3YIL021W YMR320WQ04897 101 aa2.89□□□□□ -1.95
RPB3YIL021W YLR194CQ05777 254 aa2.89□□□□□ -1.95
RPB3YIL021W SHH4Q06236 168 aa2.89□□□□□ -1.95
RPB3YIL021W LSM6Q06406 86 aaKnown RBP2.89□□□□□ -1.95
RPB3YIL021W MSA1Q08471 629 aa2.89□□□□□ -1.95
RPB3YIL021W YPL038W-AQ3E7B4 63 aa2.89□□□□□ -1.95
RPB3YIL021W YNL277W-AQ3E7Z0 62 aa2.89□□□□□ -1.95
RPB3YIL021W YCL021W-AQ96VH3 125 aa2.89□□□□□ -1.95
RPB3YIL021W BPH1P25356 2167 aa2.88□□□□□ -1.95
RPB3YIL021W CCW14O13547 238 aa2.88□□□□□ -1.95
RPB3YIL021W RPL2AP0CX45 254 aaKnown RBP2.88□□□□□ -1.95
RPB3YIL021W RPL2BP0CX46 254 aaKnown RBP2.88□□□□□ -1.95
RPB3YIL021W ATP15P21306 62 aa2.88□□□□□ -1.95
RPB3YIL021W YCR050CP25630 102 aa2.88□□□□□ -1.95
RPB3YIL021W RPL16AP26784 199 aaKnown RBP2.88□□□□□ -1.95
RPB3YIL021W SVP26P38869 228 aa2.88□□□□□ -1.95
RPB3YIL021W MIG3P39943 394 aa2.88□□□□□ -1.95
RPB3YIL021W SIM1P40472 476 aa2.88□□□□□ -1.95
RPB3YIL021W MRPS8Q03799 155 aa2.88□□□□□ -1.95
RPB3YIL021W RPL43AP0CX25 92 aaKnown RBP2.87□□□□□ -1.95
RPB3YIL021W RPL43BP0CX26 92 aa2.87□□□□□ -1.95
RPB3YIL021W SMP1P38128 452 aa2.87□□□□□ -1.95
RPB3YIL021W VTC1P40046 129 aaRIP-Chip data2.87□□□□□ -1.95not detected
RPB3YIL021W VHS2P40463 436 aa2.87□□□□□ -1.95
RPB3YIL021W SFT1P43682 97 aa2.87□□□□□ -1.95
RPB3YIL021W MMS2P53152 137 aa2.87□□□□□ -1.95
RPB3YIL021W YHR139C-AO13536 103 aa2.86□□□□□ -1.95
RPB3YIL021W RPB9P27999 122 aa2.86□□□□□ -1.95
RPB3YIL021W YCR041WP37265 110 aa2.86□□□□□ -1.95
RPB3YIL021W YBR209WP38311 105 aa2.86□□□□□ -1.95
RPB3YIL021W RRT13P40042 185 aa2.86□□□□□ -1.95
RPB3YIL021W PEX17P40155 199 aa2.86□□□□□ -1.95
RPB3YIL021W GIS2P53849 153 aaKnown RBP RIP-Chip data2.86□□□□□ -1.95not detected
RPB3YIL021W KSH1Q8TGJ3 72 aa2.86□□□□□ -1.95
RPB3YIL021W TAR1Q8TGM6 124 aa2.86□□□□□ -1.95
RPB3YIL021W RPL28P02406 149 aaKnown RBP2.85□□□□□ -1.95
RPB3YIL021W RPL18AP0CX49 186 aaKnown RBP2.85□□□□□ -1.95
RPB3YIL021W RPL18BP0CX50 186 aaKnown RBP2.85□□□□□ -1.95
RPB3YIL021W SHU1P38751 150 aa2.85□□□□□ -1.95
RPB3YIL021W YFR035CP43608 114 aa2.85□□□□□ -1.95
RPB3YIL021W FIP1P45976 327 aa2.85□□□□□ -1.95
RPB3YIL021W MRPS12P53732 153 aa2.85□□□□□ -1.95
RPB3YIL021W UTP20P35194 2493 aaKnown RBP2.85□□□□□ -1.95
RPB3YIL021W RPL15AP05748 204 aaKnown RBP2.84□□□□□ -1.95
RPB3YIL021W RPS11AP0CX47 156 aaKnown RBP2.84□□□□□ -1.95
RPB3YIL021W RPS11BP0CX48 156 aaKnown RBP2.84□□□□□ -1.95
RPB3YIL021W YGL088WP53151 121 aa2.84□□□□□ -1.95
RPB3YIL021W RSM19P53733 91 aaPredicted RBP2.84□□□□□ -1.95
RPB3YIL021W PMP3P87284 55 aa2.84□□□□□ -1.95
RPB3YIL021W YMR175W-AQ3E766 64 aa2.84□□□□□ -1.95
RPB3YIL021W QCR8P08525 94 aa2.83□□□□□ -1.96
RPB3YIL021W MPC2P38857 129 aa2.83□□□□□ -1.96
RPB3YIL021W YEL008WP40001 126 aa2.83□□□□□ -1.96
RPB3YIL021W YNL190WP53872 204 aa2.83□□□□□ -1.96
RPB3YIL021W HAL1Q01766 294 aa2.83□□□□□ -1.96
RPB3YIL021W YHR212W-AP0CX91 67 aa2.82□□□□□ -1.96
RPB3YIL021W UBC4P15731 148 aa2.82□□□□□ -1.96
RPB3YIL021W BET1P22804 142 aa2.82□□□□□ -1.96
RPB3YIL021W YCL042WP25572 119 aa2.82□□□□□ -1.96
RPB3YIL021W DSE2P38844 325 aa2.82□□□□□ -1.96
RPB3YIL021W YAR029WP39549 74 aa2.82□□□□□ -1.96
RPB3YIL021W YPS5P53057 165 aa2.82□□□□□ -1.96
RPB3YIL021W YDR381C-AQ3E6R5 114 aa2.82□□□□□ -1.96
RPB3YIL021W YSY6P38374 65 aa2.81□□□□□ -1.96
RPB3YIL021W KRE9P39005 276 aa2.81□□□□□ -1.96
RPB3YIL021W PEX22P39718 180 aa2.81□□□□□ -1.96
RPB3YIL021W YLR281CQ05863 155 aa2.81□□□□□ -1.96
RPB3YIL021W PPT2Q12036 173 aa2.81□□□□□ -1.96
RPB3YIL021W EMC6Q12431 108 aa2.81□□□□□ -1.96
RPB3YIL021W URA2P07259 2214 aaKnown RBP2.81□□□□□ -1.96
RPB3YIL021W YER187WP40102 141 aa2.8□□□□□ -1.96
RPB3YIL021W ARC15P40518 154 aaRIP-Chip data2.8□□□□□ -1.96not detected
RPB3YIL021W YIA6P40556 373 aa2.8□□□□□ -1.96
RPB3YIL021W YMR230W-AQ3E7B5 62 aa2.8□□□□□ -1.96
RPB3YIL021W AIM19P40502 157 aa2.79□□□□□ -1.96
RPB3YIL021W YMR295CQ03559 197 aa2.79□□□□□ -1.96
RPB3YIL021W YGR240C-AQ3E786 66 aa2.79□□□□□ -1.96
RPB3YIL021W YRA2P36036 203 aaKnown RBP RIP-Chip data2.78□□□□□ -1.96not detected
RPB3YIL021W COX14P39103 70 aa2.78□□□□□ -1.96
RPB3YIL021W RPR2P40571 144 aa2.78□□□□□ -1.96
RPB3YIL021W HUR1P45820 110 aa2.78□□□□□ -1.96
RPB3YIL021W ERI1P62651 68 aaKnown RBP2.78□□□□□ -1.96
RPB3YIL021W YDR274CP87283 123 aa2.78□□□□□ -1.96
RPB3YIL021W VAM10Q08474 114 aa2.78□□□□□ -1.96
RPB3YIL021W YMR122W-AQ3E842 84 aa2.78□□□□□ -1.96
RPB3YIL021W YCR001WP25347 104 aa2.77□□□□□ -1.97
RPB3YIL021W YBR219CP38317 127 aa2.77□□□□□ -1.97
RPB3YIL021W RGM1Q00453 211 aa2.77□□□□□ -1.97
RPB3YIL021W PBA1Q05778 276 aa2.77□□□□□ -1.97
RPB3YIL021W YOR020W-AQ3E824 90 aa2.77□□□□□ -1.97
RPB3YIL021W MEC1P38111 2368 aa2.76□□□□□ -1.97
RPB3YIL021W SPT4P32914 102 aaPredicted RBP2.76□□□□□ -1.97
RPB3YIL021W GAT4P40569 121 aa2.76□□□□□ -1.97
RPB3YIL021W YGR035W-AQ45U48 73 aa2.76□□□□□ -1.97
Retrieved 100 of 5,963 RNA–protein pairs in 65 ms