RNA–Protein interactions for RNA: YIL008W

URM1, Transcript of Ubiquitin-like protein involved in thiolation of cytoplasmic tRNAs, yeast

Gene URM1, Length 300 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URM1	YIL008W	AVO2	Q04749	426 aa		0.34	□□□□□ -2.36
URM1	YIL008W	TVP18	Q04767	167 aa		0.34	□□□□□ -2.36
URM1	YIL008W	YPL225W	Q08971	146 aa	Known RBP	0.34	□□□□□ -2.36
URM1	YIL008W	YLR118C	Q12354	227 aa		0.34	□□□□□ -2.36
URM1	YIL008W	YMR175W-A	Q3E766	64 aa		0.34	□□□□□ -2.36
URM1	YIL008W	ENV10	Q99382	181 aa		0.34	□□□□□ -2.36
URM1	YIL008W	Q0032	Q9ZZX7	96 aa		0.34	□□□□□ -2.36
URM1	YIL008W	YER039C-A	P0CD97	72 aa		0.33	□□□□□ -2.36
URM1	YIL008W	SPT14	P32363	452 aa		0.33	□□□□□ -2.36
URM1	YIL008W	ACP1	P32463	125 aa		0.33	□□□□□ -2.36
URM1	YIL008W	UTP11	P34247	250 aa	Predicted RBP	0.33	□□□□□ -2.36
URM1	YIL008W	YHR140W	P38842	239 aa		0.33	□□□□□ -2.36
URM1	YIL008W	VMA7	P39111	118 aa		0.33	□□□□□ -2.36
URM1	YIL008W	RPS29B	P41058	56 aa	Known RBP	0.33	□□□□□ -2.36
URM1	YIL008W	SPG1	P50088	95 aa		0.33	□□□□□ -2.36
URM1	YIL008W	YGL193C	P53097	103 aa		0.33	□□□□□ -2.36
URM1	YIL008W	YNL122C	P53921	115 aa	Predicted RBP	0.33	□□□□□ -2.36
URM1	YIL008W	PLP1	Q04004	230 aa		0.33	□□□□□ -2.36
URM1	YIL008W	YDL241W	Q07738	123 aa		0.33	□□□□□ -2.36
URM1	YIL008W	YOR105W	Q08504	108 aa		0.33	□□□□□ -2.36
URM1	YIL008W	YOR015W	Q12169	119 aa		0.33	□□□□□ -2.36
URM1	YIL008W	YGR121W-A	Q3E816	71 aa		0.33	□□□□□ -2.36
URM1	YIL008W	YAL065C	O13511	128 aa		0.32	□□□□□ -2.36
URM1	YIL008W	YBL039W-B	P0C268	59 aa		0.32	□□□□□ -2.36
URM1	YIL008W	PAU19	P0CE85	124 aa		0.32	□□□□□ -2.36
URM1	YIL008W	PAU21	P0CE86	164 aa		0.32	□□□□□ -2.36
URM1	YIL008W	PAU22	P0CE87	164 aa		0.32	□□□□□ -2.36
URM1	YIL008W	HAP3	P13434	144 aa		0.32	□□□□□ -2.36
URM1	YIL008W	PAU3	P25610	124 aa		0.32	□□□□□ -2.36
URM1	YIL008W	PAU16	P35994	123 aa		0.32	□□□□□ -2.36
URM1	YIL008W	YKR070W	P36151	352 aa	Known RBP	0.32	□□□□□ -2.36
URM1	YIL008W	YBR090C	P38253	122 aa		0.32	□□□□□ -2.36
URM1	YIL008W	YHL005C	P38752	130 aa		0.32	□□□□□ -2.36
URM1	YIL008W	IPI1	P38803	334 aa	Predicted RBP	0.32	□□□□□ -2.36
URM1	YIL008W	YAR029W	P39549	74 aa		0.32	□□□□□ -2.36
URM1	YIL008W	CYB5	P40312	120 aa		0.32	□□□□□ -2.36
URM1	YIL008W	PAU15	P40585	124 aa		0.32	□□□□□ -2.36
URM1	YIL008W	MVB12	P42939	101 aa		0.32	□□□□□ -2.36
URM1	YIL008W	ATP19	P81451	68 aa		0.32	□□□□□ -2.36
URM1	YIL008W	YCL001W-A	P87012	153 aa		0.32	□□□□□ -2.36
URM1	YIL008W	TMA20	P89886	181 aa	Predicted RBP	0.32	□□□□□ -2.36
URM1	YIL008W	YDR042C	Q03205	200 aa		0.32	□□□□□ -2.36
URM1	YIL008W	GPI19	Q04082	140 aa		0.32	□□□□□ -2.36
URM1	YIL008W	FCF2	Q12035	217 aa	Predicted RBP	0.32	□□□□□ -2.36
URM1	YIL008W	RPS22A	P0C0W1	130 aa	Known RBP	0.31	□□□□□ -2.36
URM1	YIL008W	COX7	P10174	60 aa		0.31	□□□□□ -2.36
URM1	YIL008W	YBR292C	P38357	123 aa		0.31	□□□□□ -2.36
URM1	YIL008W	SHU1	P38751	150 aa		0.31	□□□□□ -2.36
URM1	YIL008W	RPB11	P38902	120 aa		0.31	□□□□□ -2.36
URM1	YIL008W	MOG1	P47123	218 aa		0.31	□□□□□ -2.36
URM1	YIL008W	YNL184C	P53876	108 aa		0.31	□□□□□ -2.36
URM1	YIL008W	DDR2	P89113	61 aa		0.31	□□□□□ -2.36
URM1	YIL008W	YDR210W	Q03482	75 aa		0.31	□□□□□ -2.36
URM1	YIL008W	PKR1	Q03880	122 aa	Known RBP	0.31	□□□□□ -2.36
URM1	YIL008W	GIM5	Q04493	163 aa		0.31	□□□□□ -2.36
URM1	YIL008W	YKL023C-A	Q2V2P3	75 aa		0.31	□□□□□ -2.36
URM1	YIL008W	YOR008C-A	Q3E7B9	74 aa		0.31	□□□□□ -2.36
URM1	YIL008W	YCL001W-B	Q96VH2	84 aa		0.31	□□□□□ -2.36
URM1	YIL008W	Q0017	Q9ZZX8	53 aa		0.31	□□□□□ -2.36
URM1	YIL008W	PFY1	P07274	126 aa		0.3	□□□□□ -2.36
URM1	YIL008W	PAU1	P0CE88	120 aa		0.3	□□□□□ -2.36
URM1	YIL008W	PAU14	P0CE89	120 aa		0.3	□□□□□ -2.36
URM1	YIL008W	PAU6	P0CE90	120 aa		0.3	□□□□□ -2.36
URM1	YIL008W	PAU18	P0CE91	120 aa		0.3	□□□□□ -2.36
URM1	YIL008W	PAU8	P0CE92	120 aa		0.3	□□□□□ -2.36
URM1	YIL008W	PAU11	P0CE93	120 aa		0.3	□□□□□ -2.36
URM1	YIL008W	UBI4	P0CG63	381 aa	Known RBP	0.3	□□□□□ -2.36
URM1	YIL008W	SRP21	P32342	167 aa		0.3	□□□□□ -2.36
URM1	YIL008W	YBR027C	P38220	110 aa		0.3	□□□□□ -2.36
URM1	YIL008W	PAU13	P38725	120 aa		0.3	□□□□□ -2.36
URM1	YIL008W	PAU7	P39545	55 aa		0.3	□□□□□ -2.36
URM1	YIL008W	PAU5	P43575	122 aa		0.3	□□□□□ -2.36
URM1	YIL008W	YJL009W	P47078	108 aa		0.3	□□□□□ -2.36
URM1	YIL008W	PAU4	P53427	120 aa		0.3	□□□□□ -2.36
URM1	YIL008W	PAU10	Q03050	120 aa		0.3	□□□□□ -2.36
URM1	YIL008W	PAU20	Q08322	120 aa		0.3	□□□□□ -2.36
URM1	YIL008W	PAU9	Q3E770	120 aa		0.3	□□□□□ -2.36
URM1	YIL008W	YNL042W-B	Q3E7Z2	85 aa		0.3	□□□□□ -2.36
URM1	YIL008W	IGO2	Q9P305	131 aa		0.3	□□□□□ -2.36
URM1	YIL008W	RPL29	P05747	59 aa	Predicted RBP	0.29	□□□□□ -2.36
URM1	YIL008W	HMRA1	P0CY11	126 aa		0.29	□□□□□ -2.36
URM1	YIL008W	PRE1	P22141	198 aa	Known RBP	0.29	□□□□□ -2.36
URM1	YIL008W	YKR041W	P36134	250 aa		0.29	□□□□□ -2.36
URM1	YIL008W	SRP14	P38985	146 aa		0.29	□□□□□ -2.36
URM1	YIL008W	GCV3	P39726	170 aa	Predicted RBP	0.29	□□□□□ -2.36
URM1	YIL008W	YJR128W	P47162	119 aa		0.29	□□□□□ -2.36
URM1	YIL008W	BSC4	P53841	131 aa		0.29	□□□□□ -2.36
URM1	YIL008W	YNL190W	P53872	204 aa		0.29	□□□□□ -2.36
URM1	YIL008W	YML079W	Q03629	201 aa		0.29	□□□□□ -2.36
URM1	YIL008W	ATP20	Q12233	115 aa		0.29	□□□□□ -2.36
URM1	YIL008W	WIP1	Q2V2P8	89 aa		0.29	□□□□□ -2.36
URM1	YIL008W	CMC2	Q3E7A4	109 aa		0.29	□□□□□ -2.36
URM1	YIL008W	YLL006W-A	Q3E814	58 aa		0.29	□□□□□ -2.36
URM1	YIL008W	YJL127C-B	Q3E828	52 aa		0.29	□□□□□ -2.36
URM1	YIL008W	YPR014C	Q6B0W2	109 aa		0.29	□□□□□ -2.36
URM1	YIL008W	RPL36B	O14455	100 aa	Known RBP	0.28	□□□□□ -2.36
URM1	YIL008W	YLR157W-D	P0CE99	70 aa		0.28	□□□□□ -2.36
URM1	YIL008W	HMRA2	P0CY13	119 aa		0.28	□□□□□ -2.36
URM1	YIL008W	FYV5	P25585	152 aa		0.28	□□□□□ -2.36
URM1	YIL008W	MRPL11	P36521	249 aa	Predicted RBP	0.28	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms