RNA–Protein interactions for RNA: YGR063C

SPT4, Transcript of Component of the universally conserved Spt4/5 complex (DSIF complex), yeastyeast

Gene SPT4, Length 309 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT4YGR063C RPL36BO14455 100 aaKnown RBP2.69□□□□□ -1.98
SPT4YGR063C RPL36AP05745 100 aaPredicted RBP2.69□□□□□ -1.98
SPT4YGR063C YFL015CP43578 164 aa2.69□□□□□ -1.98
SPT4YGR063C YNL190WP53872 204 aa2.69□□□□□ -1.98
SPT4YGR063C NCE102Q12207 173 aaRIP-Chip data2.69□□□□□ -1.98not detected
SPT4YGR063C RPL26AP05743 127 aaKnown RBP2.68□□□□□ -1.98
SPT4YGR063C ARC15P40518 154 aaRIP-Chip data2.68□□□□□ -1.98not detected
SPT4YGR063C YFR035CP43608 114 aa2.68□□□□□ -1.98
SPT4YGR063C EAF6P47128 113 aa2.68□□□□□ -1.98
SPT4YGR063C YJR146WP47174 117 aa2.68□□□□□ -1.98
SPT4YGR063C YGL193CP53097 103 aa2.68□□□□□ -1.98
SPT4YGR063C TOS8P53147 276 aa2.68□□□□□ -1.98
SPT4YGR063C RGM1Q00453 211 aa2.68□□□□□ -1.98
SPT4YGR063C SPG4Q04438 115 aa2.68□□□□□ -1.98
SPT4YGR063C YOR268CQ08734 132 aa2.68□□□□□ -1.98
SPT4YGR063C RNH203Q12338 110 aa2.68□□□□□ -1.98
SPT4YGR063C YJR107C-AP0CT86 78 aa2.67□□□□□ -1.98
SPT4YGR063C RPS27AP35997 82 aaKnown RBP2.67□□□□□ -1.98
SPT4YGR063C RRT1P38192 103 aa2.67□□□□□ -1.98
SPT4YGR063C RPS27BP38711 82 aa2.67□□□□□ -1.98
SPT4YGR063C SPG1P50088 95 aa2.67□□□□□ -1.98
SPT4YGR063C MPC3P53311 146 aa2.67□□□□□ -1.98
SPT4YGR063C CRC1Q12289 327 aa2.67□□□□□ -1.98
SPT4YGR063C TSC3Q3E790 80 aa2.67□□□□□ -1.98
SPT4YGR063C YOR381W-AQ3E804 55 aa2.67□□□□□ -1.98
SPT4YGR063C YOR020W-AQ3E824 90 aa2.67□□□□□ -1.98
SPT4YGR063C YJL027CP47063 138 aaPredicted RBP2.66□□□□□ -1.98
SPT4YGR063C RPL26BP53221 127 aaKnown RBP2.66□□□□□ -1.98
SPT4YGR063C NAG1Q8TGN9 163 aa2.66□□□□□ -1.98
SPT4YGR063C YML100W-AQ8TGT0 57 aa2.66□□□□□ -1.98
SPT4YGR063C FPR1P20081 114 aaKnown RBP2.65□□□□□ -1.99
SPT4YGR063C YEL045CP32616 141 aa2.65□□□□□ -1.99
SPT4YGR063C YBL081WP38180 368 aaKnown RBP2.65□□□□□ -1.99
SPT4YGR063C YGR035W-AQ45U48 73 aa2.65□□□□□ -1.99
SPT4YGR063C DIF1O13577 133 aa2.64□□□□□ -1.99
SPT4YGR063C YHL037CP38733 133 aa2.64□□□□□ -1.99
SPT4YGR063C KRE9P39005 276 aa2.64□□□□□ -1.99
SPT4YGR063C TDA2P40045 126 aa2.64□□□□□ -1.99
SPT4YGR063C REE1P40893 198 aa2.64□□□□□ -1.99
SPT4YGR063C EDC1P53080 175 aaPredicted RBP2.64□□□□□ -1.99
SPT4YGR063C ATP18P81450 59 aa2.64□□□□□ -1.99
SPT4YGR063C NOP10Q6Q547 58 aaPredicted RBP2.64□□□□□ -1.99
SPT4YGR063C YOL166W-AQ8TGJ1 51 aa2.64□□□□□ -1.99
SPT4YGR063C RPL15AP05748 204 aaKnown RBP2.63□□□□□ -1.99
SPT4YGR063C YER188C-AP0C0V2 99 aa2.63□□□□□ -1.99
SPT4YGR063C YMR122CQ03879 124 aa2.63□□□□□ -1.99
SPT4YGR063C YOR376W-AQ3E805 51 aa2.63□□□□□ -1.99
SPT4YGR063C OST5Q92316 86 aa2.63□□□□□ -1.99
SPT4YGR063C YIL086CP40503 102 aa2.62□□□□□ -1.99
SPT4YGR063C RPR2P40571 144 aa2.62□□□□□ -1.99
SPT4YGR063C YPS5P53057 165 aa2.62□□□□□ -1.99
SPT4YGR063C RPS23AP0CX29 145 aaKnown RBP2.61□□□□□ -1.99
SPT4YGR063C RPS23BP0CX30 145 aa2.61□□□□□ -1.99
SPT4YGR063C UTH1P36135 365 aa2.61□□□□□ -1.99
SPT4YGR063C SED1Q01589 338 aa2.61□□□□□ -1.99
SPT4YGR063C LEE1Q02799 301 aaKnown RBP2.61□□□□□ -1.99
SPT4YGR063C COX17Q12287 69 aa2.61□□□□□ -1.99
SPT4YGR063C YBR200W-AQ3E755 54 aa2.61□□□□□ -1.99
SPT4YGR063C YFR009W-AP0C5M9 85 aa2.6□□□□□ -1.99
SPT4YGR063C MRPL39P36533 70 aa2.6□□□□□ -1.99
SPT4YGR063C YEL008WP40001 126 aa2.6□□□□□ -1.99
SPT4YGR063C YER084WP40057 128 aa2.6□□□□□ -1.99
SPT4YGR063C YIR020CP40575 100 aa2.6□□□□□ -1.99
SPT4YGR063C YGL034CP53186 121 aa2.6□□□□□ -1.99
SPT4YGR063C YMR244WQ04018 355 aa2.6□□□□□ -1.99
SPT4YGR063C YOL160WQ08321 113 aa2.6□□□□□ -1.99
SPT4YGR063C YLR122CQ12312 125 aa2.6□□□□□ -1.99
SPT4YGR063C YDR524C-BQ3E6R4 66 aa2.6□□□□□ -1.99
SPT4YGR063C YOR034C-AQ3E735 80 aa2.6□□□□□ -1.99
SPT4YGR063C BEM2P39960 2167 aaKnown RBP2.59□□□□□ -1.99
SPT4YGR063C RPS30AP0CX33 63 aaKnown RBP2.59□□□□□ -1.99
SPT4YGR063C RPS30BP0CX34 63 aaKnown RBP2.59□□□□□ -1.99
SPT4YGR063C YCR043CP25361 127 aa2.59□□□□□ -1.99
SPT4YGR063C COX14P39103 70 aa2.59□□□□□ -1.99
SPT4YGR063C POR2P40478 281 aa2.59□□□□□ -1.99
SPT4YGR063C YPR153WQ06537 140 aa2.59□□□□□ -1.99
SPT4YGR063C CCW12Q12127 133 aa2.59□□□□□ -1.99
SPT4YGR063C YOR032W-AQ8TGS1 66 aa2.59□□□□□ -1.99
SPT4YGR063C FYV5P25585 152 aa2.58□□□□□ -2
SPT4YGR063C YGL088WP53151 121 aa2.58□□□□□ -2
SPT4YGR063C YDR114CQ04597 100 aa2.58□□□□□ -2
SPT4YGR063C YAL064WP39711 94 aa2.57□□□□□ -2
SPT4YGR063C RPL38P49167 78 aaKnown RBP2.57□□□□□ -2
SPT4YGR063C SIP18P50263 79 aa2.57□□□□□ -2
SPT4YGR063C YLL006W-AQ3E814 58 aa2.57□□□□□ -2
SPT4YGR063C HUB1Q6Q546 73 aa2.57□□□□□ -2
SPT4YGR063C FAS1P07149 2051 aaKnown RBP2.57□□□□□ -2
SPT4YGR063C YER135CP40082 130 aa2.56□□□□□ -2
SPT4YGR063C TMC1Q08422 150 aaPredicted RBP2.56□□□□□ -2
SPT4YGR063C YIL046W-AQ3E7Z4 54 aa2.56□□□□□ -2
SPT4YGR063C YMR105W-AQ8TGS8 64 aa2.56□□□□□ -2
SPT4YGR063C RPL29P05747 59 aaPredicted RBP2.55□□□□□ -2
SPT4YGR063C YKL097CP34245 136 aa2.55□□□□□ -2
SPT4YGR063C MRPL38P35996 138 aaPredicted RBP2.55□□□□□ -2
SPT4YGR063C COX23P38824 151 aa2.55□□□□□ -2
SPT4YGR063C YGR045CP53229 120 aa2.55□□□□□ -2
SPT4YGR063C POL2P21951 2222 aaKnown RBP2.54□□□□□ -2
SPT4YGR063C BLM10P43583 2143 aa2.54□□□□□ -2
SPT4YGR063C DDR48P18899 430 aaKnown RBP2.54□□□□□ -2
SPT4YGR063C HOT13P36078 116 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 9.5 ms