RNA–Protein interactions for RNA: YGL244W

RTF1, Transcript of Subunit of RNAPII-associated chromatin remodeling Paf1 complex, yeastyeast

Gene RTF1, Length 1,677 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTF1YGL244W RPS11AP0CX47 156 aaKnown RBP8.52□□□□□ -1.05
RTF1YGL244W RPS11BP0CX48 156 aaKnown RBP8.52□□□□□ -1.05
RTF1YGL244W ALG13P53178 202 aa8.52□□□□□ -1.05
RTF1YGL244W Q0297Q9ZZV8 51 aa8.52□□□□□ -1.05
RTF1YGL244W COX14P39103 70 aa8.51□□□□□ -1.05
RTF1YGL244W COF1Q03048 143 aaKnown RBP8.51□□□□□ -1.05
RTF1YGL244W YOR020W-AQ3E824 90 aa8.51□□□□□ -1.05
RTF1YGL244W MPC2P38857 129 aa8.5□□□□□ -1.05
RTF1YGL244W KRE9P39005 276 aa8.5□□□□□ -1.05
RTF1YGL244W ARC15P40518 154 aaRIP-Chip data8.5□□□□□ -1.05not detected
RTF1YGL244W RPR2P40571 144 aa8.5□□□□□ -1.05
RTF1YGL244W MSN1P22148 382 aa8.49□□□□□ -1.05
RTF1YGL244W UBC11P52492 156 aa8.49□□□□□ -1.05
RTF1YGL244W YIR021W-AQ3E739 70 aa8.49□□□□□ -1.05
RTF1YGL244W YCR041WP37265 110 aa8.49□□□□□ -1.05
RTF1YGL244W SMP1P38128 452 aa8.49□□□□□ -1.05
RTF1YGL244W YBR219CP38317 127 aa8.48□□□□□ -1.05
RTF1YGL244W YDL186WP48568 277 aa8.48□□□□□ -1.05
RTF1YGL244W YPS5P53057 165 aa8.48□□□□□ -1.05
RTF1YGL244W YOR034C-AQ3E735 80 aa8.47□□□□□ -1.05
RTF1YGL244W YHL042WP38729 150 aa8.46□□□□□ -1.05
RTF1YGL244W VAM10Q08474 114 aa8.46□□□□□ -1.05
RTF1YGL244W RAD6P06104 172 aa8.46□□□□□ -1.06
RTF1YGL244W EMC6Q12431 108 aa8.45□□□□□ -1.06
RTF1YGL244W YLL006W-AQ3E814 58 aa8.45□□□□□ -1.06
RTF1YGL244W YLR236CA0A023PZG4 107 aa8.43□□□□□ -1.06
RTF1YGL244W SHH4Q06236 168 aa8.42□□□□□ -1.06
RTF1YGL244W YMR122W-AQ3E842 84 aa8.41□□□□□ -1.06
RTF1YGL244W HAL1Q01766 294 aa8.4□□□□□ -1.06
RTF1YGL244W YBR126W-AQ8TGU7 68 aa8.4□□□□□ -1.06
RTF1YGL244W YJR107C-AP0CT86 78 aa8.4□□□□□ -1.07
RTF1YGL244W YDR029WQ12111 104 aa8.4□□□□□ -1.07
RTF1YGL244W YPL038W-AQ3E7B4 63 aa8.4□□□□□ -1.07
RTF1YGL244W PRP8P33334 2413 aaKnown RBP8.39□□□□□ -1.07
RTF1YGL244W KNH1P50112 268 aa8.39□□□□□ -1.07
RTF1YGL244W YER145C-AA0A023PYF4 145 aa8.37□□□□□ -1.07
RTF1YGL244W RPB9P27999 122 aa8.37□□□□□ -1.07
RTF1YGL244W YHR212W-AP0CX91 67 aa8.37□□□□□ -1.07
RTF1YGL244W IRC21Q04772 201 aa8.37□□□□□ -1.07
RTF1YGL244W YGR240C-AQ3E786 66 aa8.35□□□□□ -1.07
RTF1YGL244W YSY6P38374 65 aa8.34□□□□□ -1.07
RTF1YGL244W ERI1P62651 68 aaKnown RBP8.34□□□□□ -1.07
RTF1YGL244W YAL065CO13511 128 aa8.34□□□□□ -1.08
RTF1YGL244W YHL018WP38744 120 aaPredicted RBP8.34□□□□□ -1.08
RTF1YGL244W ECM12O13529 151 aa8.32□□□□□ -1.08
RTF1YGL244W MPC3P53311 146 aa8.32□□□□□ -1.08
RTF1YGL244W TOM6P33448 61 aa8.31□□□□□ -1.08
RTF1YGL244W ICY1Q04329 127 aa8.31□□□□□ -1.08
RTF1YGL244W YMR175W-AQ3E766 64 aa8.3□□□□□ -1.08
RTF1YGL244W TEL1P38110 2787 aa8.3□□□□□ -1.08
RTF1YGL244W YCR001WP25347 104 aa8.3□□□□□ -1.08
RTF1YGL244W YLR285C-AQ3E771 56 aa8.3□□□□□ -1.08
RTF1YGL244W ATP18P81450 59 aa8.29□□□□□ -1.08
RTF1YGL244W YLR415CO13578 112 aa8.28□□□□□ -1.08
RTF1YGL244W RTG1P32607 177 aa8.28□□□□□ -1.08
RTF1YGL244W YLR361C-AQ3E795 98 aa8.28□□□□□ -1.08
RTF1YGL244W RPL29P05747 59 aaPredicted RBP8.27□□□□□ -1.08
RTF1YGL244W ERG28P40030 148 aa8.27□□□□□ -1.08
RTF1YGL244W YDL241WQ07738 123 aa8.27□□□□□ -1.08
RTF1YGL244W YBR144CP34215 104 aa8.27□□□□□ -1.09
RTF1YGL244W YDR274CP87283 123 aa8.26□□□□□ -1.09
RTF1YGL244W MEC1P38111 2368 aa8.26□□□□□ -1.09
RTF1YGL244W CRC1Q12289 327 aa8.25□□□□□ -1.09
RTF1YGL244W GAT4P40569 121 aa8.24□□□□□ -1.09
RTF1YGL244W MVB12P42939 101 aa8.24□□□□□ -1.09
RTF1YGL244W EDC1P53080 175 aaPredicted RBP8.24□□□□□ -1.09
RTF1YGL244W SMD1Q02260 146 aaPredicted RBP8.23□□□□□ -1.09
RTF1YGL244W YLR281CQ05863 155 aa8.22□□□□□ -1.09
RTF1YGL244W YLR156WP0CE96 114 aa8.21□□□□□ -1.09
RTF1YGL244W YLR159WP0CE97 114 aa8.21□□□□□ -1.09
RTF1YGL244W YLR161WP0CE98 114 aa8.21□□□□□ -1.09
RTF1YGL244W RPC10P40422 70 aa8.21□□□□□ -1.09
RTF1YGL244W RDS3Q06835 107 aaPredicted RBP8.21□□□□□ -1.09
RTF1YGL244W TSC3Q3E790 80 aa8.21□□□□□ -1.09
RTF1YGL244W MLF3P32047 452 aa8.21□□□□□ -1.1
RTF1YGL244W RSM19P53733 91 aaPredicted RBP8.21□□□□□ -1.1
RTF1YGL244W YFR009W-AP0C5M9 85 aa8.19□□□□□ -1.1
RTF1YGL244W YMR320WQ04897 101 aa8.18□□□□□ -1.1
RTF1YGL244W YER187WP40102 141 aa8.18□□□□□ -1.1
RTF1YGL244W AQY2P0CD90 149 aa8.17□□□□□ -1.1
RTF1YGL244W YFL019CP43576 117 aa8.17□□□□□ -1.1
RTF1YGL244W RPL38P49167 78 aaKnown RBP8.17□□□□□ -1.1
RTF1YGL244W YPR010C-AA5Z2X5 72 aa8.16□□□□□ -1.1
RTF1YGL244W RPL26AP05743 127 aaKnown RBP8.15□□□□□ -1.1
RTF1YGL244W RPL26BP53221 127 aaKnown RBP8.15□□□□□ -1.1
RTF1YGL244W YNL162W-AQ3E7A8 72 aa8.15□□□□□ -1.1
RTF1YGL244W YBL039W-BP0C268 59 aa8.14□□□□□ -1.11
RTF1YGL244W RPL43AP0CX25 92 aaKnown RBP8.14□□□□□ -1.11
RTF1YGL244W RPL43BP0CX26 92 aa8.14□□□□□ -1.11
RTF1YGL244W YAL064WP39711 94 aa8.14□□□□□ -1.11
RTF1YGL244W YBL081WP38180 368 aaKnown RBP8.14□□□□□ -1.11
RTF1YGL244W TDA2P40045 126 aa8.14□□□□□ -1.11
RTF1YGL244W YER039C-AP0CD97 72 aa8.13□□□□□ -1.11
RTF1YGL244W SGF11Q03067 99 aa8.13□□□□□ -1.11
RTF1YGL244W UBC4P15731 148 aa8.12□□□□□ -1.11
RTF1YGL244W YCR050CP25630 102 aa8.12□□□□□ -1.11
RTF1YGL244W YKL183C-AQ3E765 70 aa8.12□□□□□ -1.11
RTF1YGL244W RPL33AP05744 107 aaKnown RBP8.11□□□□□ -1.11
RTF1YGL244W RPL33BP41056 107 aaKnown RBP8.11□□□□□ -1.11
RTF1YGL244W YDR246W-AQ3E763 66 aa8.11□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 76.4 ms