RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W RPS1BP23248 255 aaKnown RBP-0.53□□□□□ -2.49
CSE1YGL238W CAF4P36130 643 aa-0.53□□□□□ -2.49
CSE1YGL238W MPC1P53157 130 aaKnown RBP-0.53□□□□□ -2.49
CSE1YGL238W YJL133C-AQ3E7A3 74 aa-0.53□□□□□ -2.49
CSE1YGL238W YOS1Q3E834 85 aa-0.53□□□□□ -2.49
CSE1YGL238W PAU19P0CE85 124 aa-0.54□□□□□ -2.5
CSE1YGL238W PAU21P0CE86 164 aa-0.54□□□□□ -2.5
CSE1YGL238W PAU22P0CE87 164 aa-0.54□□□□□ -2.5
CSE1YGL238W PAU3P25610 124 aa-0.54□□□□□ -2.5
CSE1YGL238W RSM18P40033 138 aa-0.54□□□□□ -2.5
CSE1YGL238W YER187WP40102 141 aa-0.54□□□□□ -2.5
CSE1YGL238W YGR269WP40326 108 aa-0.54□□□□□ -2.5
CSE1YGL238W PAU15P40585 124 aa-0.54□□□□□ -2.5
CSE1YGL238W PGA1P53896 198 aa-0.54□□□□□ -2.5
CSE1YGL238W SPC2Q04969 178 aa-0.54□□□□□ -2.5
CSE1YGL238W YLR031WQ07978 186 aa-0.54□□□□□ -2.5
CSE1YGL238W RPS25BP0C0T4 108 aaKnown RBP-0.54□□□□□ -2.5
CSE1YGL238W RFA3P26755 122 aaKnown RBP-0.54□□□□□ -2.5
CSE1YGL238W YER085CP40058 173 aa-0.54□□□□□ -2.5
CSE1YGL238W IRC21Q04772 201 aa-0.54□□□□□ -2.5
CSE1YGL238W YDR119W-AQ2V2P9 66 aa-0.54□□□□□ -2.5
CSE1YGL238W RPS25AQ3E792 108 aaPredicted RBP-0.54□□□□□ -2.5
CSE1YGL238W YLR342W-AQ3E810 57 aa-0.54□□□□□ -2.5
CSE1YGL238W YCR016WP25617 290 aaKnown RBP-0.55□□□□□ -2.5
CSE1YGL238W PAU16P35994 123 aa-0.55□□□□□ -2.5
CSE1YGL238W DLS1P40366 167 aa-0.55□□□□□ -2.5
CSE1YGL238W GNA1P43577 159 aaPredicted RBP-0.55□□□□□ -2.5
CSE1YGL238W SFT1P43682 97 aa-0.55□□□□□ -2.5
CSE1YGL238W YGR025WP53216 100 aa-0.55□□□□□ -2.5
CSE1YGL238W YOR385WQ08909 290 aa-0.55□□□□□ -2.5
CSE1YGL238W YOR316C-AQ3E806 69 aa-0.55□□□□□ -2.5
CSE1YGL238W YLR365WQ7LIF2 110 aa-0.55□□□□□ -2.5
CSE1YGL238W PET20Q99373 253 aa-0.55□□□□□ -2.5
CSE1YGL238W YBR121C-AP0C5L4 52 aa-0.55□□□□□ -2.5
CSE1YGL238W SNU13P39990 126 aaKnown RBP-0.55□□□□□ -2.5
CSE1YGL238W RPL22BP56628 122 aaKnown RBP-0.55□□□□□ -2.5
CSE1YGL238W TMA20P89886 181 aaPredicted RBP-0.55□□□□□ -2.5
CSE1YGL238W TLG1Q03322 224 aa-0.55□□□□□ -2.5
CSE1YGL238W YPR108W-AQ3E7B3 70 aa-0.55□□□□□ -2.5
CSE1YGL238W NHP2P32495 156 aaPredicted RBP-0.56□□□□□ -2.5
CSE1YGL238W YGR201CP42936 225 aa-0.56□□□□□ -2.5
CSE1YGL238W FRQ1Q06389 190 aa-0.56□□□□□ -2.5
CSE1YGL238W PAU17Q12370 124 aa-0.56□□□□□ -2.5
CSE1YGL238W PAU1P0CE88 120 aa-0.56□□□□□ -2.5
CSE1YGL238W PAU14P0CE89 120 aa-0.56□□□□□ -2.5
CSE1YGL238W HMRA2P0CY13 119 aa-0.56□□□□□ -2.5
CSE1YGL238W TMA22P47089 198 aaPredicted RBP-0.56□□□□□ -2.5
CSE1YGL238W LIP1Q03579 150 aa-0.56□□□□□ -2.5
CSE1YGL238W HPA2Q06592 156 aa-0.56□□□□□ -2.5
CSE1YGL238W YBR230W-AQ3E762 66 aa-0.56□□□□□ -2.5
CSE1YGL238W HTB2P02294 131 aa-0.57□□□□□ -2.5
CSE1YGL238W BUD23P25627 275 aaPredicted RBP-0.57□□□□□ -2.5
CSE1YGL238W RPA12P32529 125 aaKnown RBP-0.57□□□□□ -2.5
CSE1YGL238W SHU1P38751 150 aa-0.57□□□□□ -2.5
CSE1YGL238W YEL014CP39999 101 aa-0.57□□□□□ -2.5
CSE1YGL238W BSC4P53841 131 aa-0.57□□□□□ -2.5
CSE1YGL238W EST3Q03096 181 aa-0.57□□□□□ -2.5
CSE1YGL238W COX9P07255 59 aa-0.57□□□□□ -2.5
CSE1YGL238W YGL014C-AP0C5N1 53 aa-0.57□□□□□ -2.5
CSE1YGL238W ATP7P30902 174 aa-0.57□□□□□ -2.5
CSE1YGL238W SFT2P38166 215 aa-0.57□□□□□ -2.5
CSE1YGL238W MSS2P40990 351 aa-0.57□□□□□ -2.5
CSE1YGL238W MIC27P50945 234 aa-0.57□□□□□ -2.5
CSE1YGL238W TIM11P81449 96 aaPredicted RBP-0.57□□□□□ -2.5
CSE1YGL238W YML079WQ03629 201 aa-0.57□□□□□ -2.5
CSE1YGL238W YMR122CQ03879 124 aa-0.57□□□□□ -2.5
CSE1YGL238W YMR001C-AQ8TGS9 76 aa-0.57□□□□□ -2.5
CSE1YGL238W IGO2Q9P305 131 aa-0.57□□□□□ -2.5
CSE1YGL238W FMP32P43557 207 aa-0.58□□□□□ -2.5
CSE1YGL238W VPS28Q02767 242 aa-0.58□□□□□ -2.5
CSE1YGL238W NMA1Q06178 401 aaKnown RBP-0.58□□□□□ -2.5
CSE1YGL238W POC4Q12245 148 aaPredicted RBP-0.58□□□□□ -2.5
CSE1YGL238W MRPL31P14063 131 aaPredicted RBP-0.58□□□□□ -2.5
CSE1YGL238W YKL018C-AQ3E7A7 99 aa-0.58□□□□□ -2.5
CSE1YGL238W YJL127C-BQ3E828 52 aa-0.58□□□□□ -2.5
CSE1YGL238W YPR014CQ6B0W2 109 aa-0.58□□□□□ -2.5
CSE1YGL238W RPL36BO14455 100 aaKnown RBP-0.59□□□□□ -2.5
CSE1YGL238W QCR7P00128 127 aa-0.59□□□□□ -2.5
CSE1YGL238W AME1P38313 324 aa-0.59□□□□□ -2.5
CSE1YGL238W YGL204CP53089 101 aa-0.59□□□□□ -2.5
CSE1YGL238W YOL118CQ08259 102 aa-0.59□□□□□ -2.5
CSE1YGL238W PAU8P0CE92 120 aa-0.59□□□□□ -2.5
CSE1YGL238W PAU11P0CE93 120 aa-0.59□□□□□ -2.5
CSE1YGL238W ACP1P32463 125 aa-0.59□□□□□ -2.5
CSE1YGL238W PAU2P32612 120 aa-0.59□□□□□ -2.5
CSE1YGL238W NUF2P33895 451 aa-0.59□□□□□ -2.5
CSE1YGL238W PAU24P38155 120 aa-0.59□□□□□ -2.5
CSE1YGL238W TOS6P48560 102 aa-0.59□□□□□ -2.5
CSE1YGL238W PAU12P53343 120 aa-0.59□□□□□ -2.5
CSE1YGL238W PKR1Q03880 122 aaKnown RBP-0.59□□□□□ -2.5
CSE1YGL238W GPI11Q06636 219 aa-0.59□□□□□ -2.5
CSE1YGL238W FYV7Q12247 151 aa-0.59□□□□□ -2.5
CSE1YGL238W PAU9Q3E770 120 aa-0.59□□□□□ -2.5
CSE1YGL238W FYV5P25585 152 aa-0.59□□□□□ -2.5
CSE1YGL238W LHP1P33399 275 aaKnown RBP-0.59□□□□□ -2.5
CSE1YGL238W IPI1P38803 334 aaPredicted RBP-0.6□□□□□ -2.51
CSE1YGL238W YPL261CQ08976 102 aa-0.6□□□□□ -2.51
CSE1YGL238W DAD1Q12248 94 aa-0.6□□□□□ -2.51
CSE1YGL238W YDR246W-AQ3E763 66 aa-0.6□□□□□ -2.51
CSE1YGL238W YKT6P36015 200 aaKnown RBP-0.6□□□□□ -2.51
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms