RNA–Protein interactions for RNA: YFR029W

PTR3, Transcript of Component of the SPS plasma membrane amino acid sensor system, yeastyeast

Gene PTR3, Length 2,037 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTR3YFR029W TAR1Q8TGM6 124 aa2.66□□□□□ -1.98
PTR3YFR029W CYR1P08678 2026 aaKnown RBP2.66□□□□□ -1.98
PTR3YFR029W YEL008WP40001 126 aa2.66□□□□□ -1.98
PTR3YFR029W DNF3Q12674 1656 aa2.66□□□□□ -1.98
PTR3YFR029W MRPL38P35996 138 aaPredicted RBP2.65□□□□□ -1.99
PTR3YFR029W USO1P25386 1790 aa2.65□□□□□ -1.99
PTR3YFR029W YBR292CP38357 123 aa2.64□□□□□ -1.99
PTR3YFR029W MIC27P50945 234 aa2.64□□□□□ -1.99
PTR3YFR029W MIX17Q03667 156 aa2.63□□□□□ -1.99
PTR3YFR029W LSM6Q06406 86 aaKnown RBP2.63□□□□□ -1.99
PTR3YFR029W YDR381C-AQ3E6R5 114 aa2.63□□□□□ -1.99
PTR3YFR029W YCR095W-AQ3E787 52 aa2.63□□□□□ -1.99
PTR3YFR029W MRP17P28778 131 aa2.63□□□□□ -1.99
PTR3YFR029W ATX1P38636 73 aa2.63□□□□□ -1.99
PTR3YFR029W RPL22AP05749 121 aaKnown RBP2.62□□□□□ -1.99
PTR3YFR029W YIL163CP40448 117 aa2.62□□□□□ -1.99
PTR3YFR029W YHR007C-AQ07074 71 aa2.62□□□□□ -1.99
PTR3YFR029W YOL118CQ08259 102 aa2.62□□□□□ -1.99
PTR3YFR029W PAU6P0CE90 120 aa2.61□□□□□ -1.99
PTR3YFR029W PAU18P0CE91 120 aa2.61□□□□□ -1.99
PTR3YFR029W YHR214C-DP0CX93 97 aa2.61□□□□□ -1.99
PTR3YFR029W SNF2P22082 1703 aa2.6□□□□□ -1.99
PTR3YFR029W PDX3P38075 228 aaKnown RBP2.6□□□□□ -1.99
PTR3YFR029W YNL198CP40166 100 aa2.6□□□□□ -1.99
PTR3YFR029W SED1Q01589 338 aa2.6□□□□□ -1.99
PTR3YFR029W YMR321CQ04898 105 aa2.6□□□□□ -1.99
PTR3YFR029W APC1P53886 1748 aa2.6□□□□□ -1.99
PTR3YFR029W ECM29P38737 1868 aa2.59□□□□□ -1.99
PTR3YFR029W ACC1Q00955 2233 aaKnown RBP2.59□□□□□ -1.99
PTR3YFR029W RPL33AP05744 107 aaKnown RBP2.59□□□□□ -1.99
PTR3YFR029W YHL037CP38733 133 aa2.59□□□□□ -1.99
PTR3YFR029W DSE2P38844 325 aa2.59□□□□□ -1.99
PTR3YFR029W SWM2P40342 146 aa2.59□□□□□ -1.99
PTR3YFR029W YMR122CQ03879 124 aa2.59□□□□□ -1.99
PTR3YFR029W MHF2Q3E829 80 aa2.59□□□□□ -1.99
PTR3YFR029W TY4B-HP0C2J7 1802 aa2.59□□□□□ -1.99
PTR3YFR029W TY4B-JP47024 1803 aa2.59□□□□□ -1.99
PTR3YFR029W TIM12P32830 109 aa2.59□□□□□ -2
PTR3YFR029W VAM10Q08474 114 aa2.59□□□□□ -2
PTR3YFR029W YIL134C-AQ45U18 67 aa2.59□□□□□ -2
PTR3YFR029W RRP5Q05022 1729 aaKnown RBP2.59□□□□□ -2
PTR3YFR029W YBL071CP38185 102 aa2.58□□□□□ -2
PTR3YFR029W YSF3P0C074 85 aaPredicted RBP2.58□□□□□ -2
PTR3YFR029W MRPS12P53732 153 aa2.58□□□□□ -2
PTR3YFR029W CCW12Q12127 133 aa2.57□□□□□ -2
PTR3YFR029W UBR2Q07963 1872 aa2.56□□□□□ -2
PTR3YFR029W PFY1P07274 126 aa2.56□□□□□ -2
PTR3YFR029W VPS55P47111 140 aa2.56□□□□□ -2
PTR3YFR029W YOR343CQ12484 108 aa2.56□□□□□ -2
PTR3YFR029W YPL038W-AQ3E7B4 63 aa2.56□□□□□ -2
PTR3YFR029W URB1P34241 1764 aaKnown RBP2.55□□□□□ -2
PTR3YFR029W UTP10P42945 1769 aaKnown RBP2.55□□□□□ -2
PTR3YFR029W SNA2P56508 79 aa2.55□□□□□ -2
PTR3YFR029W IRC21Q04772 201 aa2.55□□□□□ -2
PTR3YFR029W PAU23Q07987 124 aa2.55□□□□□ -2
PTR3YFR029W PAU17Q12370 124 aa2.55□□□□□ -2
PTR3YFR029W YDL012CQ12489 107 aa2.55□□□□□ -2
PTR3YFR029W PAU8P0CE92 120 aa2.54□□□□□ -2
PTR3YFR029W PAU11P0CE93 120 aa2.54□□□□□ -2
PTR3YFR029W PAU13P38725 120 aa2.54□□□□□ -2
PTR3YFR029W PAU4P53427 120 aa2.54□□□□□ -2
PTR3YFR029W PAU10Q03050 120 aa2.54□□□□□ -2
PTR3YFR029W YDR210WQ03482 75 aa2.54□□□□□ -2
PTR3YFR029W PAU9Q3E770 120 aa2.54□□□□□ -2
PTR3YFR029W YFL041W-AQ3E817 63 aa2.54□□□□□ -2
PTR3YFR029W YNR034W-AQ3E841 98 aa2.54□□□□□ -2
PTR3YFR029W LCL2Q08045 131 aa2.54□□□□□ -2
PTR3YFR029W YER188C-AP0C0V2 99 aa2.53□□□□□ -2
PTR3YFR029W YCL042WP25572 119 aa2.53□□□□□ -2
PTR3YFR029W MRX7P53869 86 aa2.53□□□□□ -2
PTR3YFR029W YOR105WQ08504 108 aa2.53□□□□□ -2
PTR3YFR029W MPC2P38857 129 aa2.52□□□□□ -2.01
PTR3YFR029W YCL048W-AQ2V2Q2 79 aa2.52□□□□□ -2.01
PTR3YFR029W COA3Q3E7B2 85 aa2.52□□□□□ -2.01
PTR3YFR029W FKS3Q04952 1785 aa2.52□□□□□ -2.01
PTR3YFR029W YLR162WQ06235 118 aa2.52□□□□□ -2.01
PTR3YFR029W YIL156W-BQ2V2P4 73 aa2.52□□□□□ -2.01
PTR3YFR029W CCW14O13547 238 aa2.51□□□□□ -2.01
PTR3YFR029W YGR121W-AQ3E816 71 aa2.51□□□□□ -2.01
PTR3YFR029W PAU1P0CE88 120 aa2.51□□□□□ -2.01
PTR3YFR029W PAU14P0CE89 120 aa2.51□□□□□ -2.01
PTR3YFR029W YBR219CP38317 127 aa2.51□□□□□ -2.01
PTR3YFR029W YOR314WQ12506 109 aa2.51□□□□□ -2.01
PTR3YFR029W YLR255CO13574 117 aa2.5□□□□□ -2.01
PTR3YFR029W MRPL31P14063 131 aaPredicted RBP2.5□□□□□ -2.01
PTR3YFR029W VMA9Q3E7B6 73 aa2.49□□□□□ -2.01
PTR3YFR029W YAL065CO13511 128 aa2.49□□□□□ -2.01
PTR3YFR029W PAU20Q08322 120 aa2.49□□□□□ -2.01
PTR3YFR029W YDR010CQ12426 110 aa2.49□□□□□ -2.01
PTR3YFR029W COX19Q3E731 98 aa2.49□□□□□ -2.01
PTR3YFR029W BPH1P25356 2167 aa2.48□□□□□ -2.01
PTR3YFR029W STT4P37297 1900 aa2.48□□□□□ -2.01
PTR3YFR029W YHR173CP38864 112 aa2.47□□□□□ -2.01
PTR3YFR029W PRM7Q12459 698 aa2.47□□□□□ -2.01
PTR3YFR029W YHR086W-AQ3E746 53 aa2.47□□□□□ -2.01
PTR3YFR029W PMD1P32634 1753 aa2.46□□□□□ -2.01
PTR3YFR029W NOP10Q6Q547 58 aaPredicted RBP2.46□□□□□ -2.02
PTR3YFR029W BSC4P53841 131 aa2.46□□□□□ -2.02
PTR3YFR029W COX12Q01519 83 aa2.46□□□□□ -2.02
PTR3YFR029W SLH1P53327 1967 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms