RNA–Protein interactions for RNA: YFL004W

VTC2, Transcript of Subunit of vacuolar transporter chaperone (VTC) complex, yeast

Gene VTC2, Length 2,487 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VTC2	YFL004W	YDL009C	Q12210	107 aa		4.18	□□□□□ -1.74
VTC2	YFL004W	RSM19	P53733	91 aa	Predicted RBP	4.18	□□□□□ -1.74
VTC2	YFL004W	TDA8	Q6B2U8	126 aa		4.18	□□□□□ -1.74
VTC2	YFL004W	YMR105W-A	Q8TGS8	64 aa		4.18	□□□□□ -1.74
VTC2	YFL004W	YLR156W	P0CE96	114 aa		4.17	□□□□□ -1.74
VTC2	YFL004W	YLR159W	P0CE97	114 aa		4.17	□□□□□ -1.74
VTC2	YFL004W	YLR161W	P0CE98	114 aa		4.17	□□□□□ -1.74
VTC2	YFL004W	KRE9	P39005	276 aa		4.17	□□□□□ -1.74
VTC2	YFL004W	YFL019C	P43576	117 aa		4.17	□□□□□ -1.74
VTC2	YFL004W	RNH203	Q12338	110 aa		4.17	□□□□□ -1.74
VTC2	YFL004W	AIM4	P38305	123 aa	Predicted RBP	4.17	□□□□□ -1.74
VTC2	YFL004W	SIP18	P50263	79 aa		4.17	□□□□□ -1.74
VTC2	YFL004W	QCR8	P08525	94 aa		4.16	□□□□□ -1.74
VTC2	YFL004W	ARC15	P40518	154 aa	RIP-Chip data	4.16	□□□□□ -1.74	not detected
VTC2	YFL004W	YNL046W	P53956	172 aa		4.16	□□□□□ -1.74
VTC2	YFL004W	IRC21	Q04772	201 aa		4.16	□□□□□ -1.74
VTC2	YFL004W	PBP4	Q07362	185 aa	Known RBP	4.16	□□□□□ -1.74
VTC2	YFL004W	MIG3	P39943	394 aa		4.16	□□□□□ -1.74
VTC2	YFL004W	RGM1	Q00453	211 aa		4.16	□□□□□ -1.74
VTC2	YFL004W	ATP20	Q12233	115 aa		4.16	□□□□□ -1.74
VTC2	YFL004W	YOR032W-A	Q8TGS1	66 aa		4.16	□□□□□ -1.74
VTC2	YFL004W	SPS100	P13130	326 aa		4.15	□□□□□ -1.74
VTC2	YFL004W	YOR034C-A	Q3E735	80 aa		4.15	□□□□□ -1.74
VTC2	YFL004W	ERI1	P62651	68 aa	Known RBP	4.15	□□□□□ -1.75
VTC2	YFL004W	RRT15	Q3E811	62 aa		4.15	□□□□□ -1.75
VTC2	YFL004W	RPL39	P04650	51 aa		4.14	□□□□□ -1.75
VTC2	YFL004W	YBR200W-A	Q3E755	54 aa		4.14	□□□□□ -1.75
VTC2	YFL004W	TEL1	P38110	2787 aa		4.14	□□□□□ -1.75
VTC2	YFL004W	YJR107C-A	P0CT86	78 aa		4.13	□□□□□ -1.75
VTC2	YFL004W	YGR025W	P53216	100 aa		4.13	□□□□□ -1.75
VTC2	YFL004W	YOL085C	Q99345	113 aa		4.13	□□□□□ -1.75
VTC2	YFL004W	EDC1	P53080	175 aa	Predicted RBP	4.13	□□□□□ -1.75
VTC2	YFL004W	YNL234W	P53857	426 aa		4.13	□□□□□ -1.75
VTC2	YFL004W	ICY1	Q04329	127 aa		4.13	□□□□□ -1.75
VTC2	YFL004W	SRL1	Q08673	210 aa		4.13	□□□□□ -1.75
VTC2	YFL004W	YLR236C	A0A023PZG4	107 aa		4.12	□□□□□ -1.75
VTC2	YFL004W	MRPL38	P35996	138 aa	Predicted RBP	4.12	□□□□□ -1.75
VTC2	YFL004W	MMS2	P53152	137 aa		4.12	□□□□□ -1.75
VTC2	YFL004W	YOR268C	Q08734	132 aa		4.12	□□□□□ -1.75
VTC2	YFL004W	YKL097C	P34245	136 aa		4.12	□□□□□ -1.75
VTC2	YFL004W	PEX22	P39718	180 aa		4.11	□□□□□ -1.75
VTC2	YFL004W	YEL008W	P40001	126 aa		4.11	□□□□□ -1.75
VTC2	YFL004W	POR2	P40478	281 aa		4.11	□□□□□ -1.75
VTC2	YFL004W	KEG1	P43614	200 aa		4.11	□□□□□ -1.75
VTC2	YFL004W	YAL065C	O13511	128 aa		4.1	□□□□□ -1.75
VTC2	YFL004W	RPS23A	P0CX29	145 aa	Known RBP	4.1	□□□□□ -1.75
VTC2	YFL004W	RPS23B	P0CX30	145 aa		4.1	□□□□□ -1.75
VTC2	YFL004W	SPT4	P32914	102 aa	Predicted RBP	4.1	□□□□□ -1.75
VTC2	YFL004W	YGL088W	P53151	121 aa		4.1	□□□□□ -1.75
VTC2	YFL004W	ICS3	P47034	131 aa		4.1	□□□□□ -1.75
VTC2	YFL004W	MIC10	Q96VH5	97 aa		4.1	□□□□□ -1.75
VTC2	YFL004W	GAT4	P40569	121 aa		4.09	□□□□□ -1.75
VTC2	YFL004W	SPG4	Q04438	115 aa		4.09	□□□□□ -1.75
VTC2	YFL004W	YOR020W-A	Q3E824	90 aa		4.09	□□□□□ -1.75
VTC2	YFL004W	BPH1	P25356	2167 aa		4.09	□□□□□ -1.76
VTC2	YFL004W	ATP18	P81450	59 aa		4.08	□□□□□ -1.76
VTC2	YFL004W	YMR295C	Q03559	197 aa		4.08	□□□□□ -1.76
VTC2	YFL004W	YLR162W	Q06235	118 aa		4.07	□□□□□ -1.76
VTC2	YFL004W	YGR121W-A	Q3E816	71 aa		4.07	□□□□□ -1.76
VTC2	YFL004W	NOP10	Q6Q547	58 aa	Predicted RBP	4.07	□□□□□ -1.76
VTC2	YFL004W	RPL26A	P05743	127 aa	Known RBP	4.07	□□□□□ -1.76
VTC2	YFL004W	YFR035C	P43608	114 aa		4.07	□□□□□ -1.76
VTC2	YFL004W	RPL26B	P53221	127 aa	Known RBP	4.07	□□□□□ -1.76
VTC2	YFL004W	CCW12	Q12127	133 aa		4.07	□□□□□ -1.76
VTC2	YFL004W	VPS13	Q07878	3144 aa		4.07	□□□□□ -1.76
VTC2	YFL004W	YOR314W	Q12506	109 aa		4.06	□□□□□ -1.76
VTC2	YFL004W	YOR381W-A	Q3E804	55 aa		4.06	□□□□□ -1.76
VTC2	YFL004W	RSM18	P40033	138 aa		4.06	□□□□□ -1.76
VTC2	YFL004W	RPR2	P40571	144 aa		4.06	□□□□□ -1.76
VTC2	YFL004W	MPC3	P53311	146 aa		4.06	□□□□□ -1.76
VTC2	YFL004W	YDR274C	P87283	123 aa		4.06	□□□□□ -1.76
VTC2	YFL004W	WWM1	P43582	211 aa	Known RBP	4.05	□□□□□ -1.76
VTC2	YFL004W	RPL38	P49167	78 aa	Known RBP	4.05	□□□□□ -1.76
VTC2	YFL004W	COX17	Q12287	69 aa		4.05	□□□□□ -1.76
VTC2	YFL004W	YDR182W-A	Q3E796	67 aa		4.05	□□□□□ -1.76
VTC2	YFL004W	RPL36B	O14455	100 aa	Known RBP	4.05	□□□□□ -1.76
VTC2	YFL004W	RPL36A	P05745	100 aa	Predicted RBP	4.05	□□□□□ -1.76
VTC2	YFL004W	HHF1	P02309	103 aa	Known RBP	4.04	□□□□□ -1.76
VTC2	YFL004W	COX14	P39103	70 aa		4.04	□□□□□ -1.76
VTC2	YFL004W	UTH1	P36135	365 aa		4.04	□□□□□ -1.76
VTC2	YFL004W	YLL006W-A	Q3E814	58 aa		4.04	□□□□□ -1.76
VTC2	YFL004W	YFR009W-A	P0C5M9	85 aa		4.03	□□□□□ -1.76
VTC2	YFL004W	YOL166W-A	Q8TGJ1	51 aa		4.03	□□□□□ -1.76
VTC2	YFL004W	GCN1	P33892	2672 aa	Known RBP	4.03	□□□□□ -1.76
VTC2	YFL004W	SMD1	Q02260	146 aa	Predicted RBP	4.03	□□□□□ -1.76
VTC2	YFL004W	YHL005C	P38752	130 aa		4.02	□□□□□ -1.77
VTC2	YFL004W	CRC1	Q12289	327 aa		4.02	□□□□□ -1.77
VTC2	YFL004W	YHL037C	P38733	133 aa		4.02	□□□□□ -1.77
VTC2	YFL004W	TDA2	P40045	126 aa		4.02	□□□□□ -1.77
VTC2	YFL004W	SED1	Q01589	338 aa		4.02	□□□□□ -1.77
VTC2	YFL004W	RPB9	P27999	122 aa		4.01	□□□□□ -1.77
VTC2	YFL004W	YGR035W-A	Q45U48	73 aa		4.01	□□□□□ -1.77
VTC2	YFL004W	YIR020C	P40575	100 aa		4.01	□□□□□ -1.77
VTC2	YFL004W	IRA2	P19158	3079 aa		4	□□□□□ -1.77
VTC2	YFL004W	YBL081W	P38180	368 aa	Known RBP	4	□□□□□ -1.77
VTC2	YFL004W	YBR219C	P38317	127 aa		4	□□□□□ -1.77
VTC2	YFL004W	YKL065W-A	Q2V2P2	73 aa		4	□□□□□ -1.77
VTC2	YFL004W	YNL146C-A	Q3E7Z1	64 aa		4	□□□□□ -1.77
VTC2	YFL004W	VAM10	Q08474	114 aa		4	□□□□□ -1.77
VTC2	YFL004W	YOR011W-A	Q3E807	68 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 68.8 ms