RNA–Protein interactions for RNA: YER151C

UBP3, Transcript of Ubiquitin-specific protease involved in transport and osmotic response, yeast

Gene UBP3, Length 2,739 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP3	YER151C	YPT31	P38555	223 aa	Known RBP	0.39	□□□□□ -2.35
UBP3	YER151C	POG1	P40473	351 aa		0.39	□□□□□ -2.35
UBP3	YER151C	MVB12	P42939	101 aa		0.39	□□□□□ -2.35
UBP3	YER151C	RSM19	P53733	91 aa	Predicted RBP	0.39	□□□□□ -2.35
UBP3	YER151C	YOR015W	Q12169	119 aa		0.39	□□□□□ -2.35
UBP3	YER151C	FYV7	Q12247	151 aa		0.39	□□□□□ -2.35
UBP3	YER151C	RPL31A	P0C2H8	113 aa	Known RBP	0.39	□□□□□ -2.35
UBP3	YER151C	PRE1	P22141	198 aa	Known RBP	0.39	□□□□□ -2.35
UBP3	YER151C	MSA2	P36157	363 aa		0.39	□□□□□ -2.35
UBP3	YER151C	ANT1	Q06497	328 aa		0.39	□□□□□ -2.35
UBP3	YER151C	YOR192C-C	Q3E736	78 aa		0.39	□□□□□ -2.35
UBP3	YER151C	YCR050C	P25630	102 aa		0.38	□□□□□ -2.35
UBP3	YER151C	LOC1	P43586	204 aa	Predicted RBP	0.38	□□□□□ -2.35
UBP3	YER151C	YGR025W	P53216	100 aa		0.38	□□□□□ -2.35
UBP3	YER151C	SHH3	Q04487	196 aa		0.38	□□□□□ -2.35
UBP3	YER151C	PAU17	Q12370	124 aa		0.38	□□□□□ -2.35
UBP3	YER151C	YHR086W-A	Q3E746	53 aa		0.38	□□□□□ -2.35
UBP3	YER151C	YOR316C-A	Q3E806	69 aa		0.38	□□□□□ -2.35
UBP3	YER151C	YMR090W	Q04304	227 aa	Known RBP	0.38	□□□□□ -2.35
UBP3	YER151C	DAD1	Q12248	94 aa		0.38	□□□□□ -2.35
UBP3	YER151C	SEC11	P15367	167 aa		0.37	□□□□□ -2.35
UBP3	YER151C	YGL010W	P25338	174 aa		0.37	□□□□□ -2.35
UBP3	YER151C	MRPS12	P53732	153 aa		0.37	□□□□□ -2.35
UBP3	YER151C	TIM11	P81449	96 aa	Predicted RBP	0.37	□□□□□ -2.35
UBP3	YER151C	FCF2	Q12035	217 aa	Predicted RBP	0.37	□□□□□ -2.35
UBP3	YER151C	YOR008C-A	Q3E7B9	74 aa		0.37	□□□□□ -2.35
UBP3	YER151C	FYV5	P25585	152 aa		0.37	□□□□□ -2.35
UBP3	YER151C	ICS3	P47034	131 aa		0.37	□□□□□ -2.35
UBP3	YER151C	ILM1	P47155	203 aa		0.37	□□□□□ -2.35
UBP3	YER151C	THG1	P53215	237 aa	Known RBP	0.37	□□□□□ -2.35
UBP3	YER151C	CWC27	Q02770	301 aa		0.37	□□□□□ -2.35
UBP3	YER151C	YBR230W-A	Q3E762	66 aa		0.37	□□□□□ -2.35
UBP3	YER151C	YNR034W-A	Q3E841	98 aa		0.37	□□□□□ -2.35
UBP3	YER151C	YKE4	P40544	346 aa		0.36	□□□□□ -2.35
UBP3	YER151C	YOR072W	Q08486	104 aa		0.36	□□□□□ -2.35
UBP3	YER151C	YPL261C	Q08976	102 aa		0.36	□□□□□ -2.35
UBP3	YER151C	HUG1	Q6Q5K6	68 aa		0.36	□□□□□ -2.35
UBP3	YER151C	YHR139C-A	O13536	103 aa		0.36	□□□□□ -2.35
UBP3	YER151C	PAU1	P0CE88	120 aa		0.36	□□□□□ -2.35
UBP3	YER151C	PAU14	P0CE89	120 aa		0.36	□□□□□ -2.35
UBP3	YER151C	SHU1	P38751	150 aa		0.36	□□□□□ -2.35
UBP3	YER151C	PAU23	Q07987	124 aa		0.36	□□□□□ -2.35
UBP3	YER151C	DCN1	Q12395	269 aa		0.36	□□□□□ -2.35
UBP3	YER151C	YOR304C-A	O14468	76 aa		0.36	□□□□□ -2.35
UBP3	YER151C	ATP5	P09457	212 aa		0.36	□□□□□ -2.35
UBP3	YER151C	POR1	P04840	283 aa	Known RBP	0.35	□□□□□ -2.35
UBP3	YER151C	YBL010C	P32788	280 aa		0.35	□□□□□ -2.35
UBP3	YER151C	RPB11	P38902	120 aa		0.35	□□□□□ -2.35
UBP3	YER151C	APS2	Q00381	147 aa		0.35	□□□□□ -2.35
UBP3	YER151C	YDR114C	Q04597	100 aa		0.35	□□□□□ -2.35
UBP3	YER151C	COX19	Q3E731	98 aa		0.35	□□□□□ -2.35
UBP3	YER151C	YBL008W-A	Q3E821	79 aa		0.35	□□□□□ -2.35
UBP3	YER151C	RPS25B	P0C0T4	108 aa	Known RBP	0.35	□□□□□ -2.35
UBP3	YER151C	RPL27B	P0C2H7	136 aa	Known RBP	0.35	□□□□□ -2.35
UBP3	YER151C	YDL022C-A	P0C5L6	82 aa		0.35	□□□□□ -2.35
UBP3	YER151C	YCR001W	P25347	104 aa		0.35	□□□□□ -2.35
UBP3	YER151C	PAU4	P53427	120 aa		0.35	□□□□□ -2.35
UBP3	YER151C	HHO1	P53551	258 aa		0.35	□□□□□ -2.35
UBP3	YER151C	POP3	P53833	195 aa	Predicted RBP	0.35	□□□□□ -2.35
UBP3	YER151C	RPS25A	Q3E792	108 aa	Predicted RBP	0.35	□□□□□ -2.35
UBP3	YER151C	COA6	Q3E846	104 aa		0.35	□□□□□ -2.35
UBP3	YER151C	LSM2	P38203	95 aa	Known RBP	0.34	□□□□□ -2.35
UBP3	YER151C	ATX1	P38636	73 aa		0.34	□□□□□ -2.35
UBP3	YER151C	SNA2	P56508	79 aa		0.34	□□□□□ -2.35
UBP3	YER151C	YHR050W-A	Q05451	56 aa		0.34	□□□□□ -2.35
UBP3	YER151C	HFA1	P32874	2273 aa		0.34	□□□□□ -2.35
UBP3	YER151C	DOC1	P53068	250 aa		0.34	□□□□□ -2.36
UBP3	YER151C	TSC3	Q3E790	80 aa		0.34	□□□□□ -2.36
UBP3	YER151C	YJL127C-B	Q3E828	52 aa		0.34	□□□□□ -2.36
UBP3	YER151C	YOS1	Q3E834	85 aa		0.34	□□□□□ -2.36
UBP3	YER151C	IGO2	Q9P305	131 aa		0.34	□□□□□ -2.36
UBP3	YER151C	YAL064W	P39711	94 aa		0.33	□□□□□ -2.36
UBP3	YER151C	CNL1	Q06333	122 aa		0.33	□□□□□ -2.36
UBP3	YER151C	CMC2	Q3E7A4	109 aa		0.33	□□□□□ -2.36
UBP3	YER151C	YHR130C	P38834	111 aa		0.33	□□□□□ -2.36
UBP3	YER151C	YGL149W	P53116	101 aa		0.33	□□□□□ -2.36
UBP3	YER151C	YLR162W	Q06235	118 aa		0.33	□□□□□ -2.36
UBP3	YER151C	YJL133C-A	Q3E7A3	74 aa		0.33	□□□□□ -2.36
UBP3	YER151C	YOR011W-A	Q3E807	68 aa		0.33	□□□□□ -2.36
UBP3	YER151C	SUS1	Q6WNK7	96 aa		0.33	□□□□□ -2.36
UBP3	YER151C	YPL073C	P40323	161 aa		0.32	□□□□□ -2.36
UBP3	YER151C	UBC12	P52491	188 aa		0.32	□□□□□ -2.36
UBP3	YER151C	YDR119W-A	Q2V2P9	66 aa		0.32	□□□□□ -2.36
UBP3	YER151C	PAU6	P0CE90	120 aa		0.32	□□□□□ -2.36
UBP3	YER151C	PAU18	P0CE91	120 aa		0.32	□□□□□ -2.36
UBP3	YER151C	PAU8	P0CE92	120 aa		0.32	□□□□□ -2.36
UBP3	YER151C	PAU11	P0CE93	120 aa		0.32	□□□□□ -2.36
UBP3	YER151C	INO4	P13902	151 aa		0.32	□□□□□ -2.36
UBP3	YER151C	STE18	P18852	110 aa		0.32	□□□□□ -2.36
UBP3	YER151C	PAU13	P38725	120 aa		0.32	□□□□□ -2.36
UBP3	YER151C	YHL042W	P38729	150 aa		0.32	□□□□□ -2.36
UBP3	YER151C	PAU10	Q03050	120 aa		0.32	□□□□□ -2.36
UBP3	YER151C	YMR295C	Q03559	197 aa		0.32	□□□□□ -2.36
UBP3	YER151C	PAU20	Q08322	120 aa		0.32	□□□□□ -2.36
UBP3	YER151C	PAU9	Q3E770	120 aa		0.32	□□□□□ -2.36
UBP3	YER151C	YBR242W	P38331	238 aa		0.31	□□□□□ -2.36
UBP3	YER151C	DSE2	P38844	325 aa		0.31	□□□□□ -2.36
UBP3	YER151C	TDA2	P40045	126 aa		0.31	□□□□□ -2.36
UBP3	YER151C	ERV14	P53173	138 aa		0.31	□□□□□ -2.36
UBP3	YER151C	SNU23	Q12368	194 aa	Predicted RBP	0.31	□□□□□ -2.36

Retrieved 100 of 5,963 RNA–protein pairs in 18.2 ms