RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN9	YDR427W	YLR296W	Q05898	108 aa		0.78	□□□□□ -2.28
RPN9	YDR427W	POC4	Q12245	148 aa	Predicted RBP	0.78	□□□□□ -2.28
RPN9	YDR427W	RTR2	Q12378	196 aa		0.78	□□□□□ -2.28
RPN9	YDR427W	YGL194C-A	Q2V2P6	80 aa		0.78	□□□□□ -2.28
RPN9	YDR427W	COA2	Q3E823	68 aa		0.78	□□□□□ -2.28
RPN9	YDR427W	YLR307C-A	Q3E825	87 aa		0.78	□□□□□ -2.28
RPN9	YDR427W	PAU21	P0CE86	164 aa		0.77	□□□□□ -2.29
RPN9	YDR427W	PAU22	P0CE87	164 aa		0.77	□□□□□ -2.29
RPN9	YDR427W	YBR013C	P38215	129 aa		0.77	□□□□□ -2.29
RPN9	YDR427W	YAL064W	P39711	94 aa		0.77	□□□□□ -2.29
RPN9	YDR427W	YIR020C	P40575	100 aa		0.77	□□□□□ -2.29
RPN9	YDR427W	MIC27	P50945	234 aa		0.77	□□□□□ -2.29
RPN9	YDR427W	DYN2	Q02647	92 aa		0.77	□□□□□ -2.29
RPN9	YDR427W	YPR108W-A	Q3E7B3	70 aa		0.77	□□□□□ -2.29
RPN9	YDR427W	ROX3	P25046	220 aa		0.76	□□□□□ -2.29
RPN9	YDR427W	MRP17	P28778	131 aa		0.76	□□□□□ -2.29
RPN9	YDR427W	EMP24	P32803	203 aa	Known RBP	0.76	□□□□□ -2.29
RPN9	YDR427W	YBR090C	P38253	122 aa		0.76	□□□□□ -2.29
RPN9	YDR427W	PRS3	P38689	320 aa	Known RBP	0.76	□□□□□ -2.29
RPN9	YDR427W	SNU13	P39990	126 aa	Known RBP	0.76	□□□□□ -2.29
RPN9	YDR427W	PHS1	P40857	217 aa		0.76	□□□□□ -2.29
RPN9	YDR427W	YMR082C	Q04276	118 aa		0.76	□□□□□ -2.29
RPN9	YDR427W	CNL1	Q06333	122 aa		0.76	□□□□□ -2.29
RPN9	YDR427W	YLR365W	Q7LIF2	110 aa		0.76	□□□□□ -2.29
RPN9	YDR427W	CCW14	O13547	238 aa		0.75	□□□□□ -2.29
RPN9	YDR427W	RPL36B	O14455	100 aa	Known RBP	0.75	□□□□□ -2.29
RPN9	YDR427W	RTC6	O14464	93 aa		0.75	□□□□□ -2.29
RPN9	YDR427W	RPL36A	P05745	100 aa	Predicted RBP	0.75	□□□□□ -2.29
RPN9	YDR427W	YLR157W-E	P0CF00	54 aa		0.75	□□□□□ -2.29
RPN9	YDR427W	GSP1	P32835	219 aa	Known RBP	0.75	□□□□□ -2.29
RPN9	YDR427W	POP7	P38291	140 aa		0.75	□□□□□ -2.29
RPN9	YDR427W	TRS20	P38334	175 aa		0.75	□□□□□ -2.29
RPN9	YDR427W	YFR035C	P43608	114 aa		0.75	□□□□□ -2.29
RPN9	YDR427W	FRQ1	Q06389	190 aa		0.75	□□□□□ -2.29
RPN9	YDR427W	SCP1	Q08873	200 aa		0.75	□□□□□ -2.29
RPN9	YDR427W	VMA9	Q3E7B6	73 aa		0.75	□□□□□ -2.29
RPN9	YDR427W	YOS1	Q3E834	85 aa		0.75	□□□□□ -2.29
RPN9	YDR427W	LSM2	P38203	95 aa	Known RBP	0.74	□□□□□ -2.29
RPN9	YDR427W	VMA7	P39111	118 aa		0.74	□□□□□ -2.29
RPN9	YDR427W	YEA6	P39953	335 aa		0.74	□□□□□ -2.29
RPN9	YDR427W	YIL163C	P40448	117 aa		0.74	□□□□□ -2.29
RPN9	YDR427W	GNA1	P43577	159 aa	Predicted RBP	0.74	□□□□□ -2.29
RPN9	YDR427W	IMP2	P46972	177 aa		0.74	□□□□□ -2.29
RPN9	YDR427W	TVP18	Q04767	167 aa		0.74	□□□□□ -2.29
RPN9	YDR427W	YOR097C	Q12274	175 aa	Predicted RBP	0.74	□□□□□ -2.29
RPN9	YDR427W	YPR145C-A	Q2V2P0	78 aa		0.74	□□□□□ -2.29
RPN9	YDR427W	YLR146W-A	Q2V2P1	62 aa		0.74	□□□□□ -2.29
RPN9	YDR427W	COX19	Q3E731	98 aa		0.74	□□□□□ -2.29
RPN9	YDR427W	YOR034C-A	Q3E735	80 aa		0.74	□□□□□ -2.29
RPN9	YDR427W	YCR101C	P25607	182 aa		0.73	□□□□□ -2.29
RPN9	YDR427W	AUA1	P32450	94 aa		0.73	□□□□□ -2.29
RPN9	YDR427W	MRPL38	P35996	138 aa	Predicted RBP	0.73	□□□□□ -2.29
RPN9	YDR427W	GCV3	P39726	170 aa	Predicted RBP	0.73	□□□□□ -2.29
RPN9	YDR427W	SNN1	P48232	102 aa		0.73	□□□□□ -2.29
RPN9	YDR427W	TOM7	P53507	60 aa		0.73	□□□□□ -2.29
RPN9	YDR427W	YMR090W	Q04304	227 aa	Known RBP	0.73	□□□□□ -2.29
RPN9	YDR427W	YLR361C-A	Q3E795	98 aa		0.73	□□□□□ -2.29
RPN9	YDR427W	SWM2	P40342	146 aa		0.72	□□□□□ -2.29
RPN9	YDR427W	EMC5	P40540	141 aa		0.72	□□□□□ -2.29
RPN9	YDR427W	VPS55	P47111	140 aa		0.72	□□□□□ -2.29
RPN9	YDR427W	ERV14	P53173	138 aa		0.72	□□□□□ -2.29
RPN9	YDR427W	HOR7	Q05827	59 aa		0.72	□□□□□ -2.29
RPN9	YDR427W	FCF2	Q12035	217 aa	Predicted RBP	0.72	□□□□□ -2.29
RPN9	YDR427W	MRPL31	P14063	131 aa	Predicted RBP	0.71	□□□□□ -2.3
RPN9	YDR427W	SEC59	P20048	519 aa		0.71	□□□□□ -2.3
RPN9	YDR427W	QCR9	P22289	66 aa		0.71	□□□□□ -2.3
RPN9	YDR427W	YBL071C	P38185	102 aa		0.71	□□□□□ -2.3
RPN9	YDR427W	YHR138C	P38841	114 aa	Predicted RBP	0.71	□□□□□ -2.3
RPN9	YDR427W	SPI1	P40092	148 aa		0.71	□□□□□ -2.3
RPN9	YDR427W	SFT1	P43682	97 aa		0.71	□□□□□ -2.3
RPN9	YDR427W	HPA2	Q06592	156 aa		0.71	□□□□□ -2.3
RPN9	YDR427W	YGL258W-A	Q3E740	77 aa		0.71	□□□□□ -2.3
RPN9	YDR427W	YOR011W-A	Q3E807	68 aa		0.71	□□□□□ -2.3
RPN9	YDR427W	PCC1	Q3E833	88 aa		0.71	□□□□□ -2.3
RPN9	YDR427W	YHR213W-A	Q8TGT4	77 aa		0.71	□□□□□ -2.3
RPN9	YDR427W	PAU1	P0CE88	120 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	PAU14	P0CE89	120 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	PAU6	P0CE90	120 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	PAU18	P0CE91	120 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	PAU8	P0CE92	120 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	PAU11	P0CE93	120 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	PAU13	P38725	120 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	VMA21	P41806	77 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	PAU4	P53427	120 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	SAE3	P89114	91 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	PAU10	Q03050	120 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	PAU20	Q08322	120 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	YLR118C	Q12354	227 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	PAU9	Q3E770	120 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	YGR035W-A	Q45U48	73 aa		0.7	□□□□□ -2.3
RPN9	YDR427W	YBR292C	P38357	123 aa		0.69	□□□□□ -2.3
RPN9	YDR427W	YHR173C	P38864	112 aa		0.69	□□□□□ -2.3
RPN9	YDR427W	POR2	P40478	281 aa		0.69	□□□□□ -2.3
RPN9	YDR427W	YCL001W-B	Q96VH2	84 aa		0.69	□□□□□ -2.3
RPN9	YDR427W	YDL022C-A	P0C5L6	82 aa		0.68	□□□□□ -2.3
RPN9	YDR427W	FPR2	P32472	135 aa		0.68	□□□□□ -2.3
RPN9	YDR427W	SRB6	P32570	121 aa		0.68	□□□□□ -2.3
RPN9	YDR427W	MPC2	P38857	129 aa		0.68	□□□□□ -2.3
RPN9	YDR427W	RPB11	P38902	120 aa		0.68	□□□□□ -2.3
RPN9	YDR427W	SNF11	P38956	169 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 67.5 ms