RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeastyeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE4YDL231C YBL081WP38180 368 aaKnown RBP3.12□□□□□ -1.91
BRE4YDL231C DSE2P38844 325 aa3.12□□□□□ -1.91
BRE4YDL231C RRT15Q3E811 62 aa3.12□□□□□ -1.91
BRE4YDL231C HYP2P23301 157 aaKnown RBP3.12□□□□□ -1.91
BRE4YDL231C NHP2P32495 156 aaPredicted RBP3.12□□□□□ -1.91
BRE4YDL231C TRP1P00912 224 aa3.11□□□□□ -1.91
BRE4YDL231C CRC1Q12289 327 aa3.11□□□□□ -1.91
BRE4YDL231C YOR034C-AQ3E735 80 aa3.11□□□□□ -1.91
BRE4YDL231C ANB1P19211 157 aa3.11□□□□□ -1.91
BRE4YDL231C YCR007CP25354 239 aa3.11□□□□□ -1.91
BRE4YDL231C TOS6P48560 102 aa3.11□□□□□ -1.91
BRE4YDL231C YHR139C-AO13536 103 aa3.11□□□□□ -1.91
BRE4YDL231C KRE9P39005 276 aa3.11□□□□□ -1.91
BRE4YDL231C YEL067CP39978 195 aa3.11□□□□□ -1.91
BRE4YDL231C YJR146WP47174 117 aa3.11□□□□□ -1.91
BRE4YDL231C MGR2Q02889 113 aa3.11□□□□□ -1.91
BRE4YDL231C SGF11Q03067 99 aa3.11□□□□□ -1.91
BRE4YDL231C YLR112WQ12130 139 aa3.11□□□□□ -1.91
BRE4YDL231C YLR281CQ05863 155 aa3.1□□□□□ -1.91
BRE4YDL231C YKL044WP36092 106 aa3.1□□□□□ -1.91
BRE4YDL231C YAL064WP39711 94 aa3.1□□□□□ -1.91
BRE4YDL231C PBI2P0CT04 75 aaKnown RBP3.09□□□□□ -1.91
BRE4YDL231C OST2P46964 130 aa3.09□□□□□ -1.91
BRE4YDL231C YMR295CQ03559 197 aa3.09□□□□□ -1.91
BRE4YDL231C SHH4Q06236 168 aa3.09□□□□□ -1.91
BRE4YDL231C RPS8AP0CX39 200 aaKnown RBP3.09□□□□□ -1.91
BRE4YDL231C RPS8BP0CX40 200 aaKnown RBP3.09□□□□□ -1.91
BRE4YDL231C SHU1P38751 150 aa3.09□□□□□ -1.91
BRE4YDL231C SFT1P43682 97 aa3.09□□□□□ -1.91
BRE4YDL231C YNL198CP40166 100 aa3.09□□□□□ -1.92
BRE4YDL231C YNR077CP53758 84 aa3.09□□□□□ -1.92
BRE4YDL231C PBA1Q05778 276 aa3.09□□□□□ -1.92
BRE4YDL231C SNA2P56508 79 aa3.08□□□□□ -1.92
BRE4YDL231C INO4P13902 151 aa3.08□□□□□ -1.92
BRE4YDL231C PEX17P40155 199 aa3.08□□□□□ -1.92
BRE4YDL231C CPR1P14832 162 aaKnown RBP3.08□□□□□ -1.92
BRE4YDL231C YAR023CD6VPM8 179 aa3.07□□□□□ -1.92
BRE4YDL231C YHR130CP38834 111 aa3.07□□□□□ -1.92
BRE4YDL231C YIA6P40556 373 aa3.07□□□□□ -1.92
BRE4YDL231C YGR039WP53225 103 aa3.07□□□□□ -1.92
BRE4YDL231C SPI1P40092 148 aa3.07□□□□□ -1.92
BRE4YDL231C MBF1O14467 151 aaKnown RBP3.06□□□□□ -1.92
BRE4YDL231C YBR219CP38317 127 aa3.06□□□□□ -1.92
BRE4YDL231C PPT2Q12036 173 aa3.06□□□□□ -1.92
BRE4YDL231C YIL102C-AQ2V2P5 75 aa3.06□□□□□ -1.92
BRE4YDL231C ENV10Q99382 181 aa3.06□□□□□ -1.92
BRE4YDL231C HPA2Q06592 156 aa3.05□□□□□ -1.92
BRE4YDL231C YPR170W-BP0C5R9 85 aa3.05□□□□□ -1.92
BRE4YDL231C VAM10Q08474 114 aa3.05□□□□□ -1.92
BRE4YDL231C YNL277W-AQ3E7Z0 62 aa3.05□□□□□ -1.92
BRE4YDL231C LSM6Q06406 86 aaKnown RBP3.04□□□□□ -1.92
BRE4YDL231C RPR2P40571 144 aa3.04□□□□□ -1.92
BRE4YDL231C HUR1P45820 110 aa3.04□□□□□ -1.92
BRE4YDL231C YMR122W-AQ3E842 84 aa3.04□□□□□ -1.92
BRE4YDL231C UBC5P15732 148 aa3.04□□□□□ -1.92
BRE4YDL231C ATX1P38636 73 aa3.04□□□□□ -1.92
BRE4YDL231C YGL034CP53186 121 aa3.04□□□□□ -1.92
BRE4YDL231C CWP2P43497 92 aa3.03□□□□□ -1.92
BRE4YDL231C ISD11Q6Q560 94 aa3.03□□□□□ -1.92
BRE4YDL231C SBH1P52870 82 aa3.03□□□□□ -1.92
BRE4YDL231C YPR195CQ06594 109 aa3.03□□□□□ -1.92
BRE4YDL231C YGR240C-AQ3E786 66 aa3.03□□□□□ -1.92
BRE4YDL231C Q0032Q9ZZX7 96 aa3.03□□□□□ -1.92
BRE4YDL231C CYC7P00045 113 aa3.03□□□□□ -1.93
BRE4YDL231C YLL006W-AQ3E814 58 aa3.03□□□□□ -1.93
BRE4YDL231C DYN1P36022 4092 aa3.02□□□□□ -1.93
BRE4YDL231C ERI1P62651 68 aaKnown RBP3.02□□□□□ -1.93
BRE4YDL231C YAR029WP39549 74 aa3.02□□□□□ -1.93
BRE4YDL231C QCR8P08525 94 aa3.01□□□□□ -1.93
BRE4YDL231C AQY2P0CD90 149 aa3.01□□□□□ -1.93
BRE4YDL231C SPC1P46965 94 aa3.01□□□□□ -1.93
BRE4YDL231C RPL38P49167 78 aaKnown RBP3.01□□□□□ -1.93
BRE4YDL231C COX10P21592 462 aa3.01□□□□□ -1.93
BRE4YDL231C TSC3Q3E790 80 aa3.01□□□□□ -1.93
BRE4YDL231C RPA12P32529 125 aaKnown RBP3□□□□□ -1.93
BRE4YDL231C AIM19P40502 157 aa3□□□□□ -1.93
BRE4YDL231C KTI11Q3E840 82 aa3□□□□□ -1.93
BRE4YDL231C KNH1P50112 268 aa3□□□□□ -1.93
BRE4YDL231C COX14P39103 70 aa3□□□□□ -1.93
BRE4YDL231C MVB12P42939 101 aa3□□□□□ -1.93
BRE4YDL231C MRPS12P53732 153 aa3□□□□□ -1.93
BRE4YDL231C RTC6O14464 93 aa2.99□□□□□ -1.93
BRE4YDL231C SMP1P38128 452 aa2.98□□□□□ -1.93
BRE4YDL231C YOR376W-AQ3E805 51 aa2.98□□□□□ -1.93
BRE4YDL231C MPC3P53311 146 aa2.98□□□□□ -1.93
BRE4YDL231C YLR296WQ05898 108 aa2.98□□□□□ -1.93
BRE4YDL231C RAD6P06104 172 aa2.98□□□□□ -1.93
BRE4YDL231C YOR020W-AQ3E824 90 aa2.98□□□□□ -1.93
BRE4YDL231C SKI6P46948 246 aaPredicted RBP2.97□□□□□ -1.93
BRE4YDL231C YLR412C-AQ3E742 68 aa2.97□□□□□ -1.93
BRE4YDL231C RGM1Q00453 211 aa2.97□□□□□ -1.93
BRE4YDL231C YDR029WQ12111 104 aa2.97□□□□□ -1.93
BRE4YDL231C YMR175W-AQ3E766 64 aa2.97□□□□□ -1.93
BRE4YDL231C YDR034C-AP0C289 58 aa2.97□□□□□ -1.93
BRE4YDL231C YFR032C-BQ8TGU2 87 aa2.96□□□□□ -1.94
BRE4YDL231C YAL065CO13511 128 aa2.96□□□□□ -1.94
BRE4YDL231C IRC21Q04772 201 aa2.95□□□□□ -1.94
BRE4YDL231C RPL33AP05744 107 aaKnown RBP2.95□□□□□ -1.94
BRE4YDL231C GAT4P40569 121 aa2.95□□□□□ -1.94
BRE4YDL231C RPL33BP41056 107 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 6.8 ms