RNA–Protein interactions for RNA: YDL070W

BDF2, Transcript of Protein involved in transcription initiation, yeast

Gene BDF2, Length 1,917 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BDF2	YDL070W	KRE9	P39005	276 aa		5.04	□□□□□ -1.6
BDF2	YDL070W	YCL042W	P25572	119 aa		5.03	□□□□□ -1.6
BDF2	YDL070W	YCR050C	P25630	102 aa		5.03	□□□□□ -1.6
BDF2	YDL070W	RPL16B	P26785	198 aa	Known RBP	5.03	□□□□□ -1.6
BDF2	YDL070W	RRT13	P40042	185 aa		5.03	□□□□□ -1.6
BDF2	YDL070W	YEL008W	P40001	126 aa		5.03	□□□□□ -1.6
BDF2	YDL070W	RGM1	Q00453	211 aa		5.03	□□□□□ -1.6
BDF2	YDL070W	PPT2	Q12036	173 aa		5.03	□□□□□ -1.6
BDF2	YDL070W	YOR034C-A	Q3E735	80 aa		5.03	□□□□□ -1.6
BDF2	YDL070W	YNL194C	P40169	301 aa		5.02	□□□□□ -1.61
BDF2	YDL070W	SBH1	P52870	82 aa		5.02	□□□□□ -1.61
BDF2	YDL070W	CCW12	Q12127	133 aa		5.02	□□□□□ -1.61
BDF2	YDL070W	YOR011W-A	Q3E807	68 aa		5.01	□□□□□ -1.61
BDF2	YDL070W	ARC15	P40518	154 aa	RIP-Chip data	5.01	□□□□□ -1.61	not detected
BDF2	YDL070W	YBR121C-A	P0C5L4	52 aa		5	□□□□□ -1.61
BDF2	YDL070W	UBC11	P52492	156 aa		5	□□□□□ -1.61
BDF2	YDL070W	YML122C	Q03207	126 aa		5	□□□□□ -1.61
BDF2	YDL070W	YER187W	P40102	141 aa		4.99	□□□□□ -1.61
BDF2	YDL070W	YLR285C-A	Q3E771	56 aa		4.99	□□□□□ -1.61
BDF2	YDL070W	YER135C	P40082	130 aa		4.99	□□□□□ -1.61
BDF2	YDL070W	YPR013C	Q12145	317 aa		4.99	□□□□□ -1.61
BDF2	YDL070W	RPS28B	P0C0X0	67 aa	Known RBP	4.98	□□□□□ -1.61
BDF2	YDL070W	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.98	□□□□□ -1.61
BDF2	YDL070W	IRC21	Q04772	201 aa		4.97	□□□□□ -1.61
BDF2	YDL070W	YNL146C-A	Q3E7Z1	64 aa		4.97	□□□□□ -1.61
BDF2	YDL070W	YJR107C-A	P0CT86	78 aa		4.96	□□□□□ -1.62
BDF2	YDL070W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.96	□□□□□ -1.62	not detected
BDF2	YDL070W	YLR281C	Q05863	155 aa		4.95	□□□□□ -1.62
BDF2	YDL070W	RPL11A	P0C0W9	174 aa	Known RBP	4.95	□□□□□ -1.62
BDF2	YDL070W	ERG28	P40030	148 aa		4.95	□□□□□ -1.62
BDF2	YDL070W	SUT1	P53032	299 aa	Known RBP	4.95	□□□□□ -1.62
BDF2	YDL070W	YMR295C	Q03559	197 aa		4.95	□□□□□ -1.62
BDF2	YDL070W	YLR236C	A0A023PZG4	107 aa		4.94	□□□□□ -1.62
BDF2	YDL070W	YLR156W	P0CE96	114 aa		4.94	□□□□□ -1.62
BDF2	YDL070W	YLR159W	P0CE97	114 aa		4.94	□□□□□ -1.62
BDF2	YDL070W	YLR161W	P0CE98	114 aa		4.94	□□□□□ -1.62
BDF2	YDL070W	COX17	Q12287	69 aa		4.94	□□□□□ -1.62
BDF2	YDL070W	RPL11B	Q3E757	174 aa	Predicted RBP	4.94	□□□□□ -1.62
BDF2	YDL070W	YMR175W-A	Q3E766	64 aa		4.94	□□□□□ -1.62
BDF2	YDL070W	YOR020W-A	Q3E824	90 aa		4.94	□□□□□ -1.62
BDF2	YDL070W	KTI11	Q3E840	82 aa		4.94	□□□□□ -1.62
BDF2	YDL070W	MIG3	P39943	394 aa		4.93	□□□□□ -1.62
BDF2	YDL070W	RPR2	P40571	144 aa		4.93	□□□□□ -1.62
BDF2	YDL070W	EDC1	P53080	175 aa	Predicted RBP	4.93	□□□□□ -1.62
BDF2	YDL070W	ALG13	P53178	202 aa		4.93	□□□□□ -1.62
BDF2	YDL070W	BET1	P22804	142 aa		4.93	□□□□□ -1.62
BDF2	YDL070W	COX14	P39103	70 aa		4.93	□□□□□ -1.62
BDF2	YDL070W	YFR035C	P43608	114 aa		4.93	□□□□□ -1.62
BDF2	YDL070W	YDR246W-A	Q3E763	66 aa		4.93	□□□□□ -1.62
BDF2	YDL070W	PMP3	P87284	55 aa		4.91	□□□□□ -1.62
BDF2	YDL070W	TOS8	P53147	276 aa		4.91	□□□□□ -1.62
BDF2	YDL070W	HAL1	Q01766	294 aa		4.91	□□□□□ -1.62
BDF2	YDL070W	YLL006W-A	Q3E814	58 aa		4.91	□□□□□ -1.62
BDF2	YDL070W	YBR219C	P38317	127 aa		4.9	□□□□□ -1.62
BDF2	YDL070W	MPC3	P53311	146 aa		4.9	□□□□□ -1.62
BDF2	YDL070W	YMR244W	Q04018	355 aa		4.9	□□□□□ -1.62
BDF2	YDL070W	KSH1	Q8TGJ3	72 aa		4.9	□□□□□ -1.62
BDF2	YDL070W	RTG1	P32607	177 aa		4.89	□□□□□ -1.63
BDF2	YDL070W	AIM4	P38305	123 aa	Predicted RBP	4.89	□□□□□ -1.63
BDF2	YDL070W	ATP20	Q12233	115 aa		4.89	□□□□□ -1.63
BDF2	YDL070W	MRPS8	Q03799	155 aa		4.89	□□□□□ -1.63
BDF2	YDL070W	VAM10	Q08474	114 aa		4.89	□□□□□ -1.63
BDF2	YDL070W	BPH1	P25356	2167 aa		4.88	□□□□□ -1.63
BDF2	YDL070W	ATP18	P81450	59 aa		4.88	□□□□□ -1.63
BDF2	YDL070W	UBC4	P15731	148 aa		4.87	□□□□□ -1.63
BDF2	YDL070W	GAT4	P40569	121 aa		4.87	□□□□□ -1.63
BDF2	YDL070W	RPL38	P49167	78 aa	Known RBP	4.87	□□□□□ -1.63
BDF2	YDL070W	YAR029W	P39549	74 aa		4.87	□□□□□ -1.63
BDF2	YDL070W	SRL1	Q08673	210 aa		4.87	□□□□□ -1.63
BDF2	YDL070W	YLR412C-A	Q3E742	68 aa		4.87	□□□□□ -1.63
BDF2	YDL070W	SPS100	P13130	326 aa		4.86	□□□□□ -1.63
BDF2	YDL070W	ERI1	P62651	68 aa	Known RBP	4.85	□□□□□ -1.63
BDF2	YDL070W	YFL019C	P43576	117 aa		4.85	□□□□□ -1.63
BDF2	YDL070W	YKL183C-A	Q3E765	70 aa		4.85	□□□□□ -1.63
BDF2	YDL070W	RPS11A	P0CX47	156 aa	Known RBP	4.84	□□□□□ -1.63
BDF2	YDL070W	RPS11B	P0CX48	156 aa	Known RBP	4.84	□□□□□ -1.63
BDF2	YDL070W	RSM18	P40033	138 aa		4.84	□□□□□ -1.63
BDF2	YDL070W	YGR164W	P53291	111 aa		4.84	□□□□□ -1.63
BDF2	YDL070W	HOR7	Q05827	59 aa		4.84	□□□□□ -1.63
BDF2	YDL070W	YFR009W-A	P0C5M9	85 aa		4.84	□□□□□ -1.64
BDF2	YDL070W	YIR020C	P40575	100 aa		4.84	□□□□□ -1.64
BDF2	YDL070W	RSM19	P53733	91 aa	Predicted RBP	4.84	□□□□□ -1.64
BDF2	YDL070W	ICY1	Q04329	127 aa		4.84	□□□□□ -1.64
BDF2	YDL070W	SPG4	Q04438	115 aa		4.84	□□□□□ -1.64
BDF2	YDL070W	YMR320W	Q04897	101 aa		4.84	□□□□□ -1.64
BDF2	YDL070W	TDA8	Q6B2U8	126 aa		4.84	□□□□□ -1.64
BDF2	YDL070W	TMC1	Q08422	150 aa	Predicted RBP	4.83	□□□□□ -1.64
BDF2	YDL070W	NOP10	Q6Q547	58 aa	Predicted RBP	4.83	□□□□□ -1.64
BDF2	YDL070W	TDA2	P40045	126 aa		4.82	□□□□□ -1.64
BDF2	YDL070W	TAR1	Q8TGM6	124 aa		4.82	□□□□□ -1.64
BDF2	YDL070W	TSC3	Q3E790	80 aa		4.81	□□□□□ -1.64
BDF2	YDL070W	YAL065C	O13511	128 aa		4.8	□□□□□ -1.64
BDF2	YDL070W	YPS5	P53057	165 aa		4.8	□□□□□ -1.64
BDF2	YDL070W	YOR314W	Q12506	109 aa		4.8	□□□□□ -1.64
BDF2	YDL070W	TIM10	P87108	93 aa		4.8	□□□□□ -1.64
BDF2	YDL070W	SFT1	P43682	97 aa		4.78	□□□□□ -1.64
BDF2	YDL070W	CRC1	Q12289	327 aa		4.78	□□□□□ -1.64
BDF2	YDL070W	YMR122W-A	Q3E842	84 aa		4.78	□□□□□ -1.64
BDF2	YDL070W	YOR268C	Q08734	132 aa		4.78	□□□□□ -1.64
BDF2	YDL070W	RRT15	Q3E811	62 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms