RNA–Protein interactions for RNA: YBR263W

SHM1, Transcript of Mitochondrial serine hydroxymethyltransferase, yeastyeast

Gene SHM1, Length 1,473 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM1YBR263W SFT1P43682 97 aa3.97□□□□□ -1.77
SHM1YBR263W YMR122W-AQ3E842 84 aa3.97□□□□□ -1.77
SHM1YBR263W ARC15P40518 154 aaRIP-Chip data3.96□□□□□ -1.78not detected
SHM1YBR263W YJR146WP47174 117 aa3.96□□□□□ -1.78
SHM1YBR263W TOS6P48560 102 aa3.96□□□□□ -1.78
SHM1YBR263W ERI1P62651 68 aaKnown RBP3.96□□□□□ -1.78
SHM1YBR263W RPL33AP05744 107 aaKnown RBP3.95□□□□□ -1.78
SHM1YBR263W RPL33BP41056 107 aaKnown RBP3.95□□□□□ -1.78
SHM1YBR263W YGL088WP53151 121 aa3.95□□□□□ -1.78
SHM1YBR263W BET5Q03630 159 aa3.95□□□□□ -1.78
SHM1YBR263W PBA1Q05778 276 aa3.95□□□□□ -1.78
SHM1YBR263W YBR209WP38311 105 aa3.94□□□□□ -1.78
SHM1YBR263W YPL073CP40323 161 aa3.94□□□□□ -1.78
SHM1YBR263W YJL028WP47062 111 aa3.94□□□□□ -1.78
SHM1YBR263W YGR164WP53291 111 aa3.94□□□□□ -1.78
SHM1YBR263W YDR042CQ03205 200 aa3.94□□□□□ -1.78
SHM1YBR263W YOR008C-AQ3E7B9 74 aa3.94□□□□□ -1.78
SHM1YBR263W ADH1P00330 348 aaKnown RBP3.93□□□□□ -1.78
SHM1YBR263W POP3P53833 195 aaPredicted RBP3.93□□□□□ -1.78
SHM1YBR263W YMR103CQ04436 120 aa3.93□□□□□ -1.78
SHM1YBR263W YPR195CQ06594 109 aa3.93□□□□□ -1.78
SHM1YBR263W RTC6O14464 93 aa3.92□□□□□ -1.78
SHM1YBR263W TRP1P00912 224 aa3.92□□□□□ -1.78
SHM1YBR263W YDR115WQ04598 105 aa3.92□□□□□ -1.78
SHM1YBR263W YDR029WQ12111 104 aa3.92□□□□□ -1.78
SHM1YBR263W YLR112WQ12130 139 aa3.92□□□□□ -1.78
SHM1YBR263W COA3Q3E7B2 85 aa3.92□□□□□ -1.78
SHM1YBR263W ECM12O13529 151 aa3.92□□□□□ -1.78
SHM1YBR263W HMRA2P0CY13 119 aa3.92□□□□□ -1.78
SHM1YBR263W YEL008WP40001 126 aa3.92□□□□□ -1.78
SHM1YBR263W YNL198CP40166 100 aa3.92□□□□□ -1.78
SHM1YBR263W YBL112CQ3E7Y4 105 aa3.92□□□□□ -1.78
SHM1YBR263W HTL1Q9URQ5 78 aa3.92□□□□□ -1.78
SHM1YBR263W KRE1P17260 313 aa3.91□□□□□ -1.78
SHM1YBR263W YDL157CQ12082 118 aa3.91□□□□□ -1.78
SHM1YBR263W RRT15Q3E811 62 aa3.91□□□□□ -1.78
SHM1YBR263W YPR010C-AA5Z2X5 72 aa3.9□□□□□ -1.79
SHM1YBR263W SVP26P38869 228 aa3.9□□□□□ -1.79
SHM1YBR263W CWP2P43497 92 aa3.9□□□□□ -1.79
SHM1YBR263W SHH4Q06236 168 aa3.9□□□□□ -1.79
SHM1YBR263W YCL021W-AQ96VH3 125 aa3.9□□□□□ -1.79
SHM1YBR263W YCR085WP25650 117 aa3.89□□□□□ -1.79
SHM1YBR263W PAU16P35994 123 aa3.89□□□□□ -1.79
SHM1YBR263W YBR219CP38317 127 aa3.89□□□□□ -1.79
SHM1YBR263W ATX1P38636 73 aa3.89□□□□□ -1.79
SHM1YBR263W FYV4P38783 130 aaPredicted RBP3.89□□□□□ -1.79
SHM1YBR263W ATP15P21306 62 aa3.87□□□□□ -1.79
SHM1YBR263W RPA12P32529 125 aaKnown RBP3.87□□□□□ -1.79
SHM1YBR263W APS1P35181 156 aa3.86□□□□□ -1.79
SHM1YBR263W MID2P36027 376 aa3.86□□□□□ -1.79
SHM1YBR263W YBL081WP38180 368 aaKnown RBP3.86□□□□□ -1.79
SHM1YBR263W RPC10P40422 70 aa3.86□□□□□ -1.79
SHM1YBR263W YIA6P40556 373 aa3.86□□□□□ -1.79
SHM1YBR263W GAT4P40569 121 aa3.86□□□□□ -1.79
SHM1YBR263W YMR295CQ03559 197 aa3.86□□□□□ -1.79
SHM1YBR263W DFM1Q12743 341 aaKnown RBP3.86□□□□□ -1.79
SHM1YBR263W YIL102C-AQ2V2P5 75 aa3.86□□□□□ -1.79
SHM1YBR263W SCS22Q6Q595 175 aa3.86□□□□□ -1.79
SHM1YBR263W KSH1Q8TGJ3 72 aa3.86□□□□□ -1.79
SHM1YBR263W ENV10Q99382 181 aa3.86□□□□□ -1.79
SHM1YBR263W YPL229WQ99395 206 aa3.86□□□□□ -1.79
SHM1YBR263W YDL022C-AP0C5L6 82 aa3.86□□□□□ -1.79
SHM1YBR263W YAR029WP39549 74 aa3.86□□□□□ -1.79
SHM1YBR263W YLR194CQ05777 254 aa3.86□□□□□ -1.79
SHM1YBR263W YLR363W-AQ3E747 85 aa3.86□□□□□ -1.79
SHM1YBR263W YAR023CD6VPM8 179 aa3.85□□□□□ -1.79
SHM1YBR263W SEC11P15367 167 aa3.85□□□□□ -1.79
SHM1YBR263W YAL064WP39711 94 aa3.85□□□□□ -1.79
SHM1YBR263W YDR119W-AQ2V2P9 66 aa3.84□□□□□ -1.8
SHM1YBR263W YHL018WP38744 120 aaPredicted RBP3.83□□□□□ -1.8
SHM1YBR263W YPL261CQ08976 102 aa3.83□□□□□ -1.8
SHM1YBR263W YMR175W-AQ3E766 64 aa3.83□□□□□ -1.8
SHM1YBR263W YAL065CO13511 128 aa3.82□□□□□ -1.8
SHM1YBR263W YCR050CP25630 102 aa3.82□□□□□ -1.8
SHM1YBR263W PEX17P40155 199 aa3.82□□□□□ -1.8
SHM1YBR263W LCL2Q08045 131 aa3.82□□□□□ -1.8
SHM1YBR263W TOM6P33448 61 aa3.81□□□□□ -1.8
SHM1YBR263W SMP1P38128 452 aa3.81□□□□□ -1.8
SHM1YBR263W SHU1P38751 150 aa3.81□□□□□ -1.8
SHM1YBR263W COX14P39103 70 aa3.81□□□□□ -1.8
SHM1YBR263W KNH1P50112 268 aa3.81□□□□□ -1.8
SHM1YBR263W YML079WQ03629 201 aa3.81□□□□□ -1.8
SHM1YBR263W YDR034C-AP0C289 58 aa3.8□□□□□ -1.8
SHM1YBR263W UBC4P15731 148 aa3.8□□□□□ -1.8
SHM1YBR263W YKL044WP36092 106 aa3.8□□□□□ -1.8
SHM1YBR263W YEL067CP39978 195 aa3.8□□□□□ -1.8
SHM1YBR263W RPL32P38061 130 aaKnown RBP3.79□□□□□ -1.8
SHM1YBR263W MRPS12P53732 153 aa3.79□□□□□ -1.8
SHM1YBR263W TSC3Q3E790 80 aa3.79□□□□□ -1.8
SHM1YBR263W YFL041W-AQ3E817 63 aa3.79□□□□□ -1.8
SHM1YBR263W YDL241WQ07738 123 aa3.79□□□□□ -1.8
SHM1YBR263W YAL063C-AQ3E791 96 aa3.79□□□□□ -1.8
SHM1YBR263W VTC1P40046 129 aaRIP-Chip data3.78□□□□□ -1.8not detected
SHM1YBR263W YER181CP40097 107 aa3.78□□□□□ -1.8
SHM1YBR263W YNR077CP53758 84 aa3.78□□□□□ -1.8
SHM1YBR263W GIS2P53849 153 aaKnown RBP RIP-Chip data3.78□□□□□ -1.8not detected
SHM1YBR263W SNA2P56508 79 aa3.78□□□□□ -1.8
SHM1YBR263W SMD1Q02260 146 aaPredicted RBP3.78□□□□□ -1.8
SHM1YBR263W NHP2P32495 156 aaPredicted RBP3.77□□□□□ -1.81
SHM1YBR263W SPT4P32914 102 aaPredicted RBP3.77□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms