RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeastyeast

Gene CMD1, Length 444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CMD1YBR109C YOR011W-AQ3E807 68 aa2.45□□□□□ -2.02
CMD1YBR109C YFL041W-AQ3E817 63 aa2.45□□□□□ -2.02
CMD1YBR109C YER135CP40082 130 aa2.44□□□□□ -2.02
CMD1YBR109C YIL059CP40520 121 aa2.44□□□□□ -2.02
CMD1YBR109C SKI6P46948 246 aaPredicted RBP2.44□□□□□ -2.02
CMD1YBR109C YMR244WQ04018 355 aa2.44□□□□□ -2.02
CMD1YBR109C YAL067W-AQ8TGK6 75 aa2.44□□□□□ -2.02
CMD1YBR109C ENV10Q99382 181 aa2.44□□□□□ -2.02
CMD1YBR109C TOR2P32600 2474 aaKnown RBP2.43□□□□□ -2.02
CMD1YBR109C YPR010C-AA5Z2X5 72 aa2.43□□□□□ -2.02
CMD1YBR109C RPS11AP0CX47 156 aaKnown RBP2.43□□□□□ -2.02
CMD1YBR109C RPS11BP0CX48 156 aaKnown RBP2.43□□□□□ -2.02
CMD1YBR109C KRE1P17260 313 aa2.43□□□□□ -2.02
CMD1YBR109C YEL067CP39978 195 aa2.43□□□□□ -2.02
CMD1YBR109C AIM19P40502 157 aa2.43□□□□□ -2.02
CMD1YBR109C CAX4P53223 239 aa2.43□□□□□ -2.02
CMD1YBR109C COX12Q01519 83 aa2.43□□□□□ -2.02
CMD1YBR109C EMC6Q12431 108 aa2.43□□□□□ -2.02
CMD1YBR109C CSF1Q12150 2958 aa2.43□□□□□ -2.02
CMD1YBR109C PBI2P0CT04 75 aaKnown RBP2.42□□□□□ -2.02
CMD1YBR109C DSE2P38844 325 aa2.42□□□□□ -2.02
CMD1YBR109C MPC2P38857 129 aa2.42□□□□□ -2.02
CMD1YBR109C YEL008WP40001 126 aa2.42□□□□□ -2.02
CMD1YBR109C ARC15P40518 154 aaRIP-Chip data2.42□□□□□ -2.02not detected
CMD1YBR109C CWP2P43497 92 aa2.42□□□□□ -2.02
CMD1YBR109C RGM1Q00453 211 aa2.42□□□□□ -2.02
CMD1YBR109C YGR240C-AQ3E786 66 aa2.42□□□□□ -2.02
CMD1YBR109C YAL063C-AQ3E791 96 aa2.42□□□□□ -2.02
CMD1YBR109C YMR122W-AQ3E842 84 aa2.42□□□□□ -2.02
CMD1YBR109C URA2P07259 2214 aaKnown RBP2.42□□□□□ -2.02
CMD1YBR109C YDL022C-AP0C5L6 82 aa2.41□□□□□ -2.02
CMD1YBR109C UBC5P15732 148 aa2.41□□□□□ -2.02
CMD1YBR109C YHL042WP38729 150 aa2.41□□□□□ -2.02
CMD1YBR109C VTC1P40046 129 aaRIP-Chip data2.41□□□□□ -2.02not detected
CMD1YBR109C COF1Q03048 143 aaKnown RBP2.41□□□□□ -2.02
CMD1YBR109C YIR021W-AQ3E739 70 aa2.41□□□□□ -2.02
CMD1YBR109C YMR175W-AQ3E766 64 aa2.41□□□□□ -2.02
CMD1YBR109C TSC3Q3E790 80 aa2.41□□□□□ -2.02
CMD1YBR109C RPL26AP05743 127 aaKnown RBP2.4□□□□□ -2.03
CMD1YBR109C RPB9P27999 122 aa2.4□□□□□ -2.03
CMD1YBR109C SVP26P38869 228 aa2.4□□□□□ -2.03
CMD1YBR109C ERG28P40030 148 aa2.4□□□□□ -2.03
CMD1YBR109C YGL088WP53151 121 aa2.4□□□□□ -2.03
CMD1YBR109C RPL26BP53221 127 aaKnown RBP2.4□□□□□ -2.03
CMD1YBR109C YGR039WP53225 103 aa2.4□□□□□ -2.03
CMD1YBR109C MRPS12P53732 153 aa2.4□□□□□ -2.03
CMD1YBR109C YNL184CP53876 108 aa2.4□□□□□ -2.03
CMD1YBR109C SHH4Q06236 168 aa2.4□□□□□ -2.03
CMD1YBR109C YDL241WQ07738 123 aa2.4□□□□□ -2.03
CMD1YBR109C YDL012CQ12489 107 aa2.4□□□□□ -2.03
CMD1YBR109C YHR139C-AO13536 103 aa2.39□□□□□ -2.03
CMD1YBR109C MSA2P36157 363 aa2.39□□□□□ -2.03
CMD1YBR109C YNL190WP53872 204 aa2.39□□□□□ -2.03
CMD1YBR109C ECM19Q06011 112 aa2.39□□□□□ -2.03
CMD1YBR109C VAM10Q08474 114 aa2.39□□□□□ -2.03
CMD1YBR109C YPR013CQ12145 317 aa2.39□□□□□ -2.03
CMD1YBR109C Q0297Q9ZZV8 51 aa2.39□□□□□ -2.03
CMD1YBR109C IRA2P19158 3079 aa2.39□□□□□ -2.03
CMD1YBR109C GCN1P33892 2672 aaKnown RBP2.39□□□□□ -2.03
CMD1YBR109C IRA1P18963 3092 aa2.38□□□□□ -2.03
CMD1YBR109C YJR107C-AP0CT86 78 aa2.38□□□□□ -2.03
CMD1YBR109C YSY6P38374 65 aa2.38□□□□□ -2.03
CMD1YBR109C SFT1P43682 97 aa2.38□□□□□ -2.03
CMD1YBR109C YGR025WP53216 100 aa2.38□□□□□ -2.03
CMD1YBR109C RSM19P53733 91 aaPredicted RBP2.38□□□□□ -2.03
CMD1YBR109C YMR295CQ03559 197 aa2.38□□□□□ -2.03
CMD1YBR109C YDR381C-AQ3E6R5 114 aa2.38□□□□□ -2.03
CMD1YBR109C YLR236CA0A023PZG4 107 aa2.37□□□□□ -2.03
CMD1YBR109C RPL29P05747 59 aaPredicted RBP2.37□□□□□ -2.03
CMD1YBR109C TOM6P33448 61 aa2.37□□□□□ -2.03
CMD1YBR109C KNH1P50112 268 aa2.37□□□□□ -2.03
CMD1YBR109C YKL183C-AQ3E765 70 aa2.37□□□□□ -2.03
CMD1YBR109C YLL006W-AQ3E814 58 aa2.37□□□□□ -2.03
CMD1YBR109C ECM12O13529 151 aa2.36□□□□□ -2.03
CMD1YBR109C YHR212W-AP0CX91 67 aa2.36□□□□□ -2.03
CMD1YBR109C SPC1P46965 94 aa2.36□□□□□ -2.03
CMD1YBR109C YDR274CP87283 123 aa2.36□□□□□ -2.03
CMD1YBR109C SMD1Q02260 146 aaPredicted RBP2.36□□□□□ -2.03
CMD1YBR109C SGF11Q03067 99 aa2.36□□□□□ -2.03
CMD1YBR109C ICY1Q04329 127 aa2.36□□□□□ -2.03
CMD1YBR109C IRC21Q04772 201 aa2.36□□□□□ -2.03
CMD1YBR109C YPL038W-AQ3E7B4 63 aa2.36□□□□□ -2.03
CMD1YBR109C YGR035W-AQ45U48 73 aa2.36□□□□□ -2.03
CMD1YBR109C TAR1Q8TGM6 124 aa2.36□□□□□ -2.03
CMD1YBR109C YPL229WQ99395 206 aa2.36□□□□□ -2.03
CMD1YBR109C PRP8P33334 2413 aaKnown RBP2.35□□□□□ -2.03
CMD1YBR109C SPT4P32914 102 aaPredicted RBP2.35□□□□□ -2.03
CMD1YBR109C RPC10P40422 70 aa2.35□□□□□ -2.03
CMD1YBR109C YFR035CP43608 114 aa2.35□□□□□ -2.03
CMD1YBR109C RDS3Q06835 107 aaPredicted RBP2.35□□□□□ -2.03
CMD1YBR109C YDR029WQ12111 104 aa2.35□□□□□ -2.03
CMD1YBR109C YAL065CO13511 128 aa2.34□□□□□ -2.03
CMD1YBR109C YBL039W-BP0C268 59 aa2.34□□□□□ -2.03
CMD1YBR109C AQY2P0CD90 149 aa2.34□□□□□ -2.03
CMD1YBR109C YRA2P36036 203 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
CMD1YBR109C TDA2P40045 126 aa2.34□□□□□ -2.03
CMD1YBR109C MVB12P42939 101 aa2.34□□□□□ -2.03
CMD1YBR109C YFL019CP43576 117 aa2.34□□□□□ -2.03
CMD1YBR109C ATP18P81450 59 aa2.34□□□□□ -2.03
CMD1YBR109C YLR285C-AQ3E771 56 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms