RNA–Protein interactions for RNA: ENST00000642141.1

SCN1A-222, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

Gene SCN1A, Length 921 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-222ENST00000642141 MYL1P05976 194 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 MBL2P11226 248 aaPredicted RBP10.93□□□□□ -0.66
SCN1A-222ENST00000642141 CD58P19256 250 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 YWHAQP27348 245 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 ADORA2BP29275 332 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 PGFP49763 221 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 AP3M2P53677 418 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 NOP14P78316 857 aaKnown RBP10.93□□□□□ -0.66
SCN1A-222ENST00000642141 PPP3CAQ08209 521 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 ADAM9Q13443 819 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 SIM2Q14190 667 aaPredicted RBP10.93□□□□□ -0.66
SCN1A-222ENST00000642141 EML3Q32P44 896 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 MAMSTRQ6ZN01 415 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 FAM35AQ86V20 835 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 FAM186BQ8IYM0 893 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 FUKQ8N0W3 1084 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 NUP93Q8N1F7 819 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 SLC2A14Q8TDB8 520 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 TMC2Q8TDI7 906 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 TAS1R2Q8TE23 839 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 ATP2A3Q93084 1043 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 FBXO32Q969P5 355 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 TTLL2Q9BWV7 592 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 FAM126AQ9BYI3 521 aaPredicted RBP10.93□□□□□ -0.66
SCN1A-222ENST00000642141 CFAP97Q9P2B7 532 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 RAB23Q9ULC3 237 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 ARHGAP26Q9UNA1 814 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 TRAF3IP3Q9Y228 551 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 CPQQ9Y646 472 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 GVINP1Q7Z2Y8 2422 aa10.93□□□□□ -0.66
SCN1A-222ENST00000642141 GPR179Q6PRD1 2367 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 ZNF638Q14966 1978 aaKnown RBP10.92□□□□□ -0.66
SCN1A-222ENST00000642141 OBSL1O75147 1896 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 GOLGA6L4A6NEF3 574 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 SOBPA7XYQ1 873 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 IKBKBO14920 756 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 ASS1P00966 412 aaKnown RBP10.92□□□□□ -0.66
SCN1A-222ENST00000642141 FAM163BP0C2L3 166 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 KRT13P13646 458 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 P4HA1P13674 534 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 ASPAP45381 313 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 SEC13P55735 322 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 MAP3K7CLP57077 242 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 AMPD2Q01433 879 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 SPEM2Q0P670 501 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 USP4Q13107 963 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 ISM2Q6H9L7 571 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 CEP68Q76N32 757 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 FILIP1Q7Z7B0 1213 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 SFTPA1Q8IWL2 248 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 EZH1Q92800 747 aaPredicted RBP10.92□□□□□ -0.66
SCN1A-222ENST00000642141 SECISBP2LQ93073 1101 aaKnown RBP10.92□□□□□ -0.66
SCN1A-222ENST00000642141 TNIP3Q96KP6 325 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 SLITRK1Q96PX8 696 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 HHIPQ96QV1 700 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 TWNKQ96RR1 684 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 SMOQ99835 787 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 IER2Q9BTL4 223 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 CCSER2Q9H7U1 834 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 VRTNQ9H8Y1 702 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 APOBEC3GQ9HC16 384 aaKnown RBP10.92□□□□□ -0.66
SCN1A-222ENST00000642141 EHD2Q9NZN4 543 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 GMIPQ9P107 970 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 USP18Q9UMW8 372 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 SLC8A2Q9UPR5 921 aa10.92□□□□□ -0.66
SCN1A-222ENST00000642141 ATP8B3O60423 1300 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 COCHO43405 550 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 KIF20AO95235 890 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 OAS1P00973 400 aaKnown RBP10.91□□□□□ -0.66
SCN1A-222ENST00000642141 IRF1P10914 325 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 RPL13P26373 211 aaKnown RBP10.91□□□□□ -0.66
SCN1A-222ENST00000642141 PSMC2P35998 433 aaKnown RBP10.91□□□□□ -0.66
SCN1A-222ENST00000642141 PRCPP42785 496 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 SLC6A11P48066 632 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 PDE6CP51160 858 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 SLC5A3P53794 718 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 NR1H3Q13133 447 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 BECN1Q14457 450 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 CCDC6Q16204 474 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 RSPO4Q2I0M5 234 aaPredicted RBP10.91□□□□□ -0.66
SCN1A-222ENST00000642141 ZNF394Q53GI3 561 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 C2orf27AQ580R0 203 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 LONP2Q86WA8 852 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 FMR1NBQ8N0W7 255 aaPredicted RBP10.91□□□□□ -0.66
SCN1A-222ENST00000642141 SYNPOQ8N3V7 929 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 GUF1Q8N442 669 aaKnown RBP10.91□□□□□ -0.66
SCN1A-222ENST00000642141 RPLP0P6Q8NHW5 317 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 TMEM174Q8WUU8 243 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 SEMA4DQ92854 862 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 CD101Q93033 1021 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 WBP2Q969T9 261 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 SMARCD1Q96GM5 515 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 PARD6AQ9NPB6 346 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 DMAP1Q9NPF5 467 aaPredicted RBP10.91□□□□□ -0.66
SCN1A-222ENST00000642141 INVSQ9Y283 1065 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 DENND4CQ5VZ89 1909 aa10.91□□□□□ -0.66
SCN1A-222ENST00000642141 ATG2BQ96BY7 2078 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 TNFRSF10BO14763 440 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 AXIN1O15169 862 aa10.9□□□□□ -0.66
SCN1A-222ENST00000642141 RTN3O95197 1032 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms