RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 FAM71DQ8N9W8 422 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 TTC13Q8NBP0 860 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 RSAD2Q8WXG1 361 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 CABS1Q96KC9 395 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 B3GNT5Q9BYG0 378 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 CCDC134Q9H6E4 229 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 DERAQ9Y315 318 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 NRCAMQ92823 1304 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 EXOC1LA0A1B0GW35 172 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 APOC4-APOC2K7ER74 178 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 APOC2P02655 101 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 VIMP08670 466 aaKnown RBP17.76■□□□□ 0.43
PHGDH-229ENST00000641891 MFSD10Q14728 455 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 CCL14Q16627 93 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 SOWAHAQ2M3V2 549 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 MSS51Q4VC12 460 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 FNBP1LQ5T0N5 605 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 C9orf57Q5W0N0 161 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 YTHDF3Q7Z739 585 aaKnown RBP17.76■□□□□ 0.43
PHGDH-229ENST00000641891 SCUBE3Q8IX30 993 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 BEST2Q8NFU1 509 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 OR6B3Q8NGW1 331 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 GDAP1Q8TB36 358 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 PPM1EQ8WY54 764 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 CCDC77Q9BR77 488 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 TRIM6Q9C030 488 aaPredicted RBP17.76■□□□□ 0.43
PHGDH-229ENST00000641891 VPS37BQ9H9H4 285 aa17.76■□□□□ 0.43
PHGDH-229ENST00000641891 MBLAC1A4D2B0 266 aaPredicted RBP17.75■□□□□ 0.43
PHGDH-229ENST00000641891 POC1B-GALNT4F8VUJ3 575 aa17.75■□□□□ 0.43
PHGDH-229ENST00000641891 DPYSL3Q14195 570 aa17.75■□□□□ 0.43
PHGDH-229ENST00000641891 SCYL2Q6P3W7 929 aa17.75■□□□□ 0.43
PHGDH-229ENST00000641891 ALKAL1Q6UXT8 129 aa17.75■□□□□ 0.43
PHGDH-229ENST00000641891 CEP128Q6ZU80 1094 aa17.75■□□□□ 0.43
PHGDH-229ENST00000641891 TAX1BP1Q86VP1 789 aa17.75■□□□□ 0.43
PHGDH-229ENST00000641891 TTC39CQ8N584 583 aa17.75■□□□□ 0.43
PHGDH-229ENST00000641891 C2orf69Q8N8R5 385 aa17.75■□□□□ 0.43
PHGDH-229ENST00000641891 SPATA18Q8TC71 538 aa17.75■□□□□ 0.43
PHGDH-229ENST00000641891 DYDC1Q8WWB3 177 aa17.75■□□□□ 0.43
PHGDH-229ENST00000641891 KHSRPQ92945 711 aaKnown RBP eCLIP17.75■□□□□ 0.43
PHGDH-229ENST00000641891 MIS12Q9H081 205 aa17.75■□□□□ 0.43
PHGDH-229ENST00000641891 RNF39Q9H2S5 420 aa17.75■□□□□ 0.43
PHGDH-229ENST00000641891 CNTN3Q9P232 1028 aa17.75■□□□□ 0.43
PHGDH-229ENST00000641891 PIN4Q9Y237 131 aaKnown RBP17.75■□□□□ 0.43
PHGDH-229ENST00000641891 SMIM35A0A1B0GVV1 85 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 ALOX15BO15296 676 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 TREHO43280 583 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 PDGFRBP09619 1106 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 RBP3P10745 1247 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 BEX3Q00994 111 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 ZC3H12AQ5D1E8 599 aaKnown RBP17.74■□□□□ 0.43
PHGDH-229ENST00000641891 MORN1Q5T089 497 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 ZNF618Q5T7W0 954 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 C1orf228Q6PIY5 440 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 CENPUQ71F23 418 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 ZC3H18Q86VM9 953 aaKnown RBP17.74■□□□□ 0.43
PHGDH-229ENST00000641891 SESTD1Q86VW0 696 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 NAT8LQ8N9F0 302 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 CLEC4CQ8WTT0 213 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 MRRFQ96E11 262 aaKnown RBP17.74■□□□□ 0.43
PHGDH-229ENST00000641891 WDR83Q9BRX9 315 aaKnown RBP17.74■□□□□ 0.43
PHGDH-229ENST00000641891 FRMD8P1Q9BZ68 369 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-229ENST00000641891 RSAD1Q9HA92 442 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 GOLGA2P5Q9HBQ8 144 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 NGRNQ9NPE2 291 aaKnown RBP17.74■□□□□ 0.43
PHGDH-229ENST00000641891 SLC5A4Q9NY91 659 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 DOCK3Q8IZD9 2030 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 SPTLC1O15269 473 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 PAPSS1O43252 624 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-229ENST00000641891 PRPSAP2O60256 369 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 TMEM63AO94886 807 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 ENDOD1O94919 500 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 ZNF865P0CJ78 1059 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-229ENST00000641891 FGFR1P11362 822 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 CCDC130P13994 396 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 TFE3P19532 575 aaPredicted RBP17.74■□□□□ 0.43
PHGDH-229ENST00000641891 FKBP1BP68106 108 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 HIF1AQ16665 826 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 PPIL6Q8IXY8 311 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 C7orf31Q8N865 590 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 FAM172AQ8WUF8 416 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 SLC35F5Q8WV83 523 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 MAML1Q92585 1016 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 TTC25Q96NG3 672 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 SLC4A5Q9BY07 1137 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 ADAM33Q9BZ11 813 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 OSBPL7Q9BZF2 842 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 ZNF236Q9UL36 1845 aa17.74■□□□□ 0.43
PHGDH-229ENST00000641891 CLUHO75153 1309 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 A8MXQ7 604 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 MCF2LO15068 1137 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 ADORA2BP29275 332 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 GPX6P59796 221 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 SLC6A3Q01959 620 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 MAP2K5Q13163 448 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 SNX17Q15036 470 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 STILQ15468 1287 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 CA9Q16790 459 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 SYCP2LQ5T4T6 812 aa17.73■□□□□ 0.43
PHGDH-229ENST00000641891 APBB1IPQ7Z5R6 666 aaPredicted RBP17.73■□□□□ 0.43
PHGDH-229ENST00000641891 PACS2Q86VP3 889 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms