RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 FAM149B1Q96BN6 582 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 SPATA17Q96L03 361 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 EIF3CQ99613 913 aaKnown RBP13.64□□□□□ -0.23
PHGDH-220ENST00000641570 TSGA10Q9BZW7 698 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 TTYH1Q9H313 450 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-220ENST00000641570 ZDHHC7Q9NXF8 308 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 HCFC2Q9Y5Z7 792 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 TSC2P49815 1807 aa13.64□□□□□ -0.23
PHGDH-220ENST00000641570 FAM170AA1A519 330 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 SLC38A8A6NNN8 435 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 GOLGA8SH3BPF8 625 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 PIK3R2O00459 728 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 SOX1O00570 391 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-220ENST00000641570 DDX3XO00571 662 aaKnown RBP eCLIP13.63□□□□□ -0.237e-18■■■□□ 16.8
PHGDH-220ENST00000641570 CCL16O15467 120 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 SOAT2O75908 522 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 ABL1P00519 1130 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 EPCAMP16422 314 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 GPD2P43304 727 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 KIF5AQ12840 1032 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 IFI16Q16666 785 aaKnown RBP13.63□□□□□ -0.23
PHGDH-220ENST00000641570 ARHGAP15Q53QZ3 475 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 FAM102AQ5T9C2 384 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-220ENST00000641570 SDHAF4Q5VUM1 108 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 PDZD4Q76G19 769 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-220ENST00000641570 RSRC2Q7L4I2 434 aaKnown RBP13.63□□□□□ -0.23
PHGDH-220ENST00000641570 DEFB123Q8N688 67 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 LEMD2Q8NC56 503 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 SLC30A5Q8TAD4 765 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 KCTD13Q8WZ19 329 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 VCPIP1Q96JH7 1222 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 CDK5RAP1Q96SZ6 601 aaKnown RBP13.63□□□□□ -0.23
PHGDH-220ENST00000641570 KCNK16Q96T55 309 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 SMOQ99835 787 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 CSNK1G1Q9HCP0 422 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 CNGB3Q9NQW8 809 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 CLDND1Q9NY35 253 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 MYO1AQ9UBC5 1043 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 NAGPAQ9UK23 515 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 GBF1Q92538 1859 aa13.63□□□□□ -0.23
PHGDH-220ENST00000641570 A0A087X0T9 212 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 E5RJQ4 531 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 ZMYND10O75800 440 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 SEC24AO95486 1093 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 ZBED1O96006 694 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 FAM228BP0C875 321 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 RALAP11233 206 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 CHRNB2P17787 502 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 CDC25CP30307 473 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 HOXA9P31269 272 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 CDH5P33151 784 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-220ENST00000641570 PPP3CCP48454 512 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 GPR15P49685 360 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 GPC5P78333 572 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 CAMK1Q14012 370 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 PABPC1LQ4VXU2 614 aaKnown RBP13.62□□□□□ -0.23
PHGDH-220ENST00000641570 ARHGAP29Q52LW3 1261 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 EFHC1Q5JVL4 640 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 BTBD8Q5XKL5 378 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 PMF1Q6P1K2 205 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 PAQR9Q6ZVX9 377 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 PHF13Q86YI8 300 aaPredicted RBP13.62□□□□□ -0.23
PHGDH-220ENST00000641570 EFHBQ8N7U6 833 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 GPR152Q8TDT2 470 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 RNF139Q8WU17 664 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 TLR8Q9NR97 1041 aaKnown RBP13.62□□□□□ -0.23
PHGDH-220ENST00000641570 PARVAQ9NVD7 372 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 TRPM5Q9NZQ8 1165 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 CTTNBP2NLQ9P2B4 639 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 CNOT8Q9UFF9 292 aaKnown RBP13.62□□□□□ -0.23
PHGDH-220ENST00000641570 LCMT1Q9UIC8 334 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 PCDHA13Q9Y5I0 950 aa13.62□□□□□ -0.23
PHGDH-220ENST00000641570 CCDC195A0A1B0GUA6 201 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 ZNF197O14709 1029 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 KRT86O43790 486 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 USP17L7P0C7H9 530 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 UNGP13051 313 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-220ENST00000641570 HOXB8P17481 243 aaPredicted RBP13.61□□□□□ -0.23
PHGDH-220ENST00000641570 PTPN2P17706 415 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 FECHP22830 423 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 MMP8P22894 467 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 NOP2P46087 812 aaKnown RBP13.61□□□□□ -0.23
PHGDH-220ENST00000641570 PSEN1P49768 467 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 RARS2Q5T160 578 aaKnown RBP13.61□□□□□ -0.23
PHGDH-220ENST00000641570 MCOLN2Q8IZK6 566 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 TTC9BQ8N6N2 239 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 SLC35F5Q8WV83 523 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 IRGQQ8WZA9 623 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 SMG7Q92540 1137 aaKnown RBP13.61□□□□□ -0.23
PHGDH-220ENST00000641570 MRPS31Q92665 395 aaKnown RBP13.61□□□□□ -0.23
PHGDH-220ENST00000641570 PSMG2Q969U7 264 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 CPXM1Q96SM3 734 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 PCDHB18PQ96TA0 734 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 ZSWIM1Q9BR11 485 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 CORO1BQ9BR76 489 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 ULBP1Q9BZM6 244 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 SLITRK6Q9H5Y7 841 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 INTUQ9ULD6 942 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 STAP1Q9ULZ2 295 aa13.61□□□□□ -0.23
PHGDH-220ENST00000641570 MTCH2Q9Y6C9 303 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms