RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 WDR59Q6PJI9 974 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 TADA2BQ86TJ2 420 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 PIGZQ86VD9 579 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 TTC30AQ86WT1 665 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 ZDHHC17Q8IUH5 632 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 GIPC2Q8TF65 315 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 STK32AQ8WU08 396 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 ZNF653Q96CK0 615 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 C18orf8Q96DM3 657 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 PKMYT1Q99640 499 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 CHP1Q99653 195 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 C11orf70Q9BRQ4 267 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 SELENOOQ9BVL4 669 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 RHOBTB2Q9BYZ6 727 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 UBXN6Q9BZV1 441 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 NACA2Q9H009 215 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 MRPL47Q9HD33 250 aaKnown RBP13.65□□□□□ -0.22
PHGDH-218ENST00000641491 ASAH2Q9NR71 780 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 SPTLC3Q9NUV7 552 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 COMMD8Q9NX08 183 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 NME7Q9Y5B8 376 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 EPN1Q9Y6I3 576 aaPredicted RBP13.65□□□□□ -0.22
PHGDH-218ENST00000641491 PIEZO1Q92508 2521 aa13.65□□□□□ -0.22
PHGDH-218ENST00000641491 EIF3CLB5ME19 914 aaKnown RBP13.64□□□□□ -0.23
PHGDH-218ENST00000641491 CAPN9O14815 690 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 ZSCAN12O43309 604 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 FTLP02792 175 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-218ENST00000641491 CYP1A1P04798 512 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-218ENST00000641491 HNRNPA1P09651 372 aaKnown RBP eCLIP13.64□□□□□ -0.23
PHGDH-218ENST00000641491 H2AFZP0C0S5 128 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 CCDC175P0C221 793 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 ABCB4P21439 1286 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 YWHAQP27348 245 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 MAGEA1P43355 309 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 TKTL1P51854 596 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 SLC5A3P53794 718 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 NOMO3P69849 1222 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 CENPCQ03188 943 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 C1QBPQ07021 282 aaKnown RBP13.64□□□□□ -0.23
PHGDH-218ENST00000641491 ADIGQ0VDE8 80 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 CCDC142Q17RM4 750 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 CYP4A22Q5TCH4 519 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 CES5AQ6NT32 575 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 DCUN1D2Q6PH85 259 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 MMS22LQ6ZRQ5 1243 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 H2AFVQ71UI9 128 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 ADGRD2Q7Z7M1 963 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 STKLD1Q8NE28 680 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 PDZD8Q8NEN9 1154 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 DDX1Q92499 740 aaKnown RBP13.64□□□□□ -0.23
PHGDH-218ENST00000641491 FBXO32Q969P5 355 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 FAM149B1Q96BN6 582 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 SPATA17Q96L03 361 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 EIF3CQ99613 913 aaKnown RBP13.64□□□□□ -0.23
PHGDH-218ENST00000641491 TSGA10Q9BZW7 698 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 ZDHHC7Q9NXF8 308 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 HCFC2Q9Y5Z7 792 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 TSC2P49815 1807 aa13.64□□□□□ -0.23
PHGDH-218ENST00000641491 FAM170AA1A519 330 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 SLC38A8A6NNN8 435 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 GOLGA8SH3BPF8 625 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 PIK3R2O00459 728 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 DDX3XO00571 662 aaKnown RBP eCLIP13.63□□□□□ -0.237e-18■■■□□ 16.8
PHGDH-218ENST00000641491 CCL16O15467 120 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 SOAT2O75908 522 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 ABL1P00519 1130 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 EPCAMP16422 314 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 GPD2P43304 727 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 KIF5AQ12840 1032 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 ADGRE1Q14246 886 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 IFI16Q16666 785 aaKnown RBP13.63□□□□□ -0.23
PHGDH-218ENST00000641491 ARHGAP15Q53QZ3 475 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 FAM102AQ5T9C2 384 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-218ENST00000641491 SDHAF4Q5VUM1 108 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 PDZD4Q76G19 769 aaPredicted RBP13.63□□□□□ -0.23
PHGDH-218ENST00000641491 RSRC2Q7L4I2 434 aaKnown RBP13.63□□□□□ -0.23
PHGDH-218ENST00000641491 LEMD2Q8NC56 503 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 SLC30A5Q8TAD4 765 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 KCTD13Q8WZ19 329 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 VCPIP1Q96JH7 1222 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 CDK5RAP1Q96SZ6 601 aaKnown RBP13.63□□□□□ -0.23
PHGDH-218ENST00000641491 KCNK16Q96T55 309 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 SMOQ99835 787 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 CSNK1G1Q9HCP0 422 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 CNGB3Q9NQW8 809 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 CLDND1Q9NY35 253 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 MYO1AQ9UBC5 1043 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 NAGPAQ9UK23 515 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 GBF1Q92538 1859 aa13.63□□□□□ -0.23
PHGDH-218ENST00000641491 A0A087X0T9 212 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 E5RJQ4 531 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 ZMYND10O75800 440 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 SEC24AO95486 1093 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 ZBED1O96006 694 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 FAM228BP0C875 321 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 RALAP11233 206 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 BMP1P13497 986 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 CHRNB2P17787 502 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 CDC25CP30307 473 aa13.62□□□□□ -0.23
PHGDH-218ENST00000641491 HOXA9P31269 272 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms