RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.1■□□□□ 0.17
SPIN3-242ENST00000640577 ASNSD1Q9NWL6 643 aa16.1■□□□□ 0.17
SPIN3-242ENST00000640577 GPATCH2LQ9NWQ4 482 aa16.1■□□□□ 0.17
SPIN3-242ENST00000640577 DRG1Q9Y295 367 aaKnown RBP16.1■□□□□ 0.17
SPIN3-242ENST00000640577 ITGAVP06756 1048 aa16.1■□□□□ 0.17
SPIN3-242ENST00000640577 LSP1P33241 339 aa16.1■□□□□ 0.17
SPIN3-242ENST00000640577 PCK1P35558 622 aa16.1■□□□□ 0.17
SPIN3-242ENST00000640577 MDH1P40925 334 aaKnown RBP16.1■□□□□ 0.17
SPIN3-242ENST00000640577 TAF6P49848 677 aa16.1■□□□□ 0.17
SPIN3-242ENST00000640577 SLC6A3Q01959 620 aa16.1■□□□□ 0.17
SPIN3-242ENST00000640577 GPS1Q13098 491 aa16.1■□□□□ 0.17
SPIN3-242ENST00000640577 FAM47CQ5HY64 1035 aa16.1■□□□□ 0.17
SPIN3-242ENST00000640577 SLC2A14Q8TDB8 520 aa16.1■□□□□ 0.17
SPIN3-242ENST00000640577 RSPH14Q9UHP6 348 aa16.1■□□□□ 0.17
SPIN3-242ENST00000640577 EFR3BQ9Y2G0 817 aa16.1■□□□□ 0.17
SPIN3-242ENST00000640577 IFNB1P01574 187 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 MYCNP04198 464 aaPredicted RBP16.09■□□□□ 0.17
SPIN3-242ENST00000640577 CACNB2Q08289 660 aaPredicted RBP16.09■□□□□ 0.17
SPIN3-242ENST00000640577 ACAP1Q15027 740 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 LONRF1Q17RB8 773 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 NPNTQ6UXI9 565 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 TRMT10CQ7L0Y3 403 aaKnown RBP16.09■□□□□ 0.17
SPIN3-242ENST00000640577 APPL2Q8NEU8 664 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 MAGEB5Q9BZ81 275 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 AGO3Q9H9G7 860 aaKnown RBP16.09■□□□□ 0.17
SPIN3-242ENST00000640577 MIOSQ9NXC5 875 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 NINJ2Q9NZG7 142 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 HESX1Q9UBX0 185 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 ADAMTS4O75173 837 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 ENDOD1O94919 500 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 TTC4O95801 387 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 RARBP10826 455 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 ACAT1P24752 427 aaKnown RBP16.09■□□□□ 0.17
SPIN3-242ENST00000640577 MLH1P40692 756 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 ATXN1P54253 815 aaKnown RBP16.09■□□□□ 0.17
SPIN3-242ENST00000640577 PPP2R2AP63151 447 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 CA9Q16790 459 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 ZC3H12AQ5D1E8 599 aaKnown RBP16.09■□□□□ 0.17
SPIN3-242ENST00000640577 ANKRD52Q8NB46 1076 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 MDM1Q8TC05 714 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 PGM2Q96G03 612 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 C9orf72Q96LT7 481 aa16.09■□□□□ 0.17
SPIN3-242ENST00000640577 SENP6Q9GZR1 1112 aaPredicted RBP16.09■□□□□ 0.17
SPIN3-242ENST00000640577 UPF3AQ9H1J1 476 aaKnown RBP16.09■□□□□ 0.17
SPIN3-242ENST00000640577 NGRNQ9NPE2 291 aaKnown RBP16.09■□□□□ 0.17
SPIN3-242ENST00000640577 ZNF638Q14966 1978 aaKnown RBP16.09■□□□□ 0.17
SPIN3-242ENST00000640577 FOXO6A8MYZ6 492 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 SGK1O00141 431 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 DNALI1O14645 258 aaPredicted RBP16.08■□□□□ 0.17
SPIN3-242ENST00000640577 IL4RP24394 825 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 CCND3P30281 292 aaPredicted RBP16.08■□□□□ 0.17
SPIN3-242ENST00000640577 SEC24CP53992 1094 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 CDH6P55285 790 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 FCGRTP55899 365 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 CAV1Q03135 178 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 LMNB2Q03252 620 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 GAD2Q05329 585 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 AUHQ13825 339 aaKnown RBP16.08■□□□□ 0.17
SPIN3-242ENST00000640577 DPYSL3Q14195 570 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 CYP4F22Q6NT55 531 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 SERINC5Q86VE9 423 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 HOOK3Q86VS8 718 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 RFX6Q8HWS3 928 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 ADGRF2Q8IZF7 708 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 FAM172AQ8WUF8 416 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 NDRG1Q92597 394 aaKnown RBP16.08■□□□□ 0.17
SPIN3-242ENST00000640577 ZNF560Q96MR9 790 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 GAD1Q99259 594 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 TMEM109Q9BVC6 243 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 SNX25Q9H3E2 840 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 TRPV2Q9Y5S1 764 aa16.08■□□□□ 0.17
SPIN3-242ENST00000640577 CLDN5O00501 218 aa16.08■□□□□ 0.16
SPIN3-242ENST00000640577 SETSIPP0DME0 302 aa16.08■□□□□ 0.16
SPIN3-242ENST00000640577 LCP1P13796 627 aa16.08■□□□□ 0.16
SPIN3-242ENST00000640577 ELNP15502 786 aa16.08■□□□□ 0.16
SPIN3-242ENST00000640577 HDAC4P56524 1084 aa16.08■□□□□ 0.16
SPIN3-242ENST00000640577 FASTKD3Q14CZ7 662 aaKnown RBP16.08■□□□□ 0.16
SPIN3-242ENST00000640577 HP1BP3Q5SSJ5 553 aaPredicted RBP16.08■□□□□ 0.16
SPIN3-242ENST00000640577 KIAA0319Q5VV43 1072 aa16.08■□□□□ 0.16
SPIN3-242ENST00000640577 MFSD14CQ5VZR4 134 aa16.08■□□□□ 0.16
SPIN3-242ENST00000640577 WSCD1Q658N2 575 aa16.08■□□□□ 0.16
SPIN3-242ENST00000640577 SCYL2Q6P3W7 929 aa16.08■□□□□ 0.16
SPIN3-242ENST00000640577 UNC45BQ8IWX7 931 aa16.08■□□□□ 0.16
SPIN3-242ENST00000640577 TAB3Q8N5C8 712 aaPredicted RBP16.08■□□□□ 0.16
SPIN3-242ENST00000640577 BCAS4Q8TDM0 211 aa16.08■□□□□ 0.16
SPIN3-242ENST00000640577 FAM105AQ9NUU6 356 aa16.08■□□□□ 0.16
SPIN3-242ENST00000640577 CTNNAL1Q9UBT7 734 aa16.08■□□□□ 0.16
SPIN3-242ENST00000640577 DPYSL4O14531 572 aa16.07■□□□□ 0.16
SPIN3-242ENST00000640577 SEPT4O43236 478 aa16.07■□□□□ 0.16
SPIN3-242ENST00000640577 BEST1O76090 585 aa16.07■□□□□ 0.16
SPIN3-242ENST00000640577 BST2Q10589 180 aaKnown RBP16.07■□□□□ 0.16
SPIN3-242ENST00000640577 SV2CQ496J9 727 aa16.07■□□□□ 0.16
SPIN3-242ENST00000640577 FUKQ8N0W3 1084 aa16.07■□□□□ 0.16
SPIN3-242ENST00000640577 ZCCHC9Q8N567 271 aaKnown RBP16.07■□□□□ 0.16
SPIN3-242ENST00000640577 STK32AQ8WU08 396 aa16.07■□□□□ 0.16
SPIN3-242ENST00000640577 RBM15Q96T37 977 aaKnown RBP eCLIP16.07■□□□□ 0.16
SPIN3-242ENST00000640577 PAAF1Q9BRP4 392 aa16.07■□□□□ 0.16
SPIN3-242ENST00000640577 RRP15Q9Y3B9 282 aaKnown RBP16.07■□□□□ 0.16
SPIN3-242ENST00000640577 RASGRF2O14827 1237 aa16.07■□□□□ 0.16
SPIN3-242ENST00000640577 PRPSAP2O60256 369 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms