RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 CDH5P33151 784 aaPredicted RBP22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 ACADSBP45954 432 aa22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 NOMO3P69849 1222 aa22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 ITIH3Q06033 890 aa22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 PDCLQ13371 301 aa22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 MTMR3Q13615 1198 aa22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 PMF1Q6P1K2 205 aa22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 SYCE2Q6PIF2 218 aa22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 CYP26C1Q6V0L0 522 aa22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 MAFAQ8NHW3 353 aaPredicted RBP22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 STK32AQ8WU08 396 aa22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 KCTD13Q8WZ19 329 aa22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 CORO1BQ9BR76 489 aa22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 UBE2ZQ9H832 354 aaPredicted RBP22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 COMMD8Q9NX08 183 aa22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 DOCK6Q96HP0 2047 aa22.74■■□□□ 1.23
TSPAN9-208ENST00000640568 HHLA1C9JL84 531 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 CYP1A1P04798 512 aaPredicted RBP22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 LCP1P13796 627 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 YWHAQP27348 245 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 LTBRP36941 435 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 NSFP46459 744 aaKnown RBP22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 CLEC16AQ2KHT3 1053 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 PPP1R2P3Q6NXS1 205 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 GPRIN1Q7Z2K8 1008 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 CCDC186Q7Z3E2 898 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 CPA5Q8WXQ8 436 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 ZNF707Q96C28 371 aaPredicted RBP22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 PPP1R13BQ96KQ4 1090 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 PCDHB18PQ96TA0 734 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 CYLDQ9NQC7 956 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 SSU72P8A0A1W2PR75 194 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 PIK3R2O00459 728 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 TNFRSF10BO14763 440 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 EIF4A3P38919 411 aaKnown RBP22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 TKTL1P51854 596 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 CDK17Q00537 523 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 ADIGQ0VDE8 80 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 CLUL1Q15846 466 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 CYP4A22Q5TCH4 519 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 GPR149Q86SP6 731 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 ERICH1Q86X53 443 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 WDTC1Q8N5D0 677 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 LEMD2Q8NC56 503 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 SCAMP5Q8TAC9 235 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 HLA-CQ95604 372 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 FBXO32Q969P5 355 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 CCDC42Q96M95 316 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 SLITRK1Q96PX8 696 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 GCNAQ96QF7 691 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 CHP1Q99653 195 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 SYT11Q9BT88 431 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 MIS12Q9H081 205 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 ADAM7Q9H2U9 754 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 ADAMTS1Q9UHI8 967 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 CYTH4Q9UIA0 394 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 CD207Q9UJ71 328 aa22.73■■□□□ 1.23
TSPAN9-208ENST00000640568 FAM170AA1A519 330 aa22.72■■□□□ 1.23
TSPAN9-208ENST00000640568 AKR1B10O60218 316 aa22.72■■□□□ 1.23
TSPAN9-208ENST00000640568 UNGP13051 313 aaPredicted RBP22.72■■□□□ 1.23
TSPAN9-208ENST00000640568 KCNA5P22460 613 aa22.72■■□□□ 1.23
TSPAN9-208ENST00000640568 KIF11P52732 1056 aa22.72■■□□□ 1.23
TSPAN9-208ENST00000640568 MAPK8IP2Q13387 824 aaPredicted RBP22.72■■□□□ 1.23
TSPAN9-208ENST00000640568 RAB41Q5JT25 222 aa22.72■■□□□ 1.23
TSPAN9-208ENST00000640568 PDZD4Q76G19 769 aaPredicted RBP22.72■■□□□ 1.23
TSPAN9-208ENST00000640568 GRASPQ7Z6J2 395 aaPredicted RBP22.72■■□□□ 1.23
TSPAN9-208ENST00000640568 TRMT2BQ96GJ1 504 aaKnown RBP22.72■■□□□ 1.23
TSPAN9-208ENST00000640568 MSLNLQ96KJ4 702 aa22.72■■□□□ 1.23
TSPAN9-208ENST00000640568 NHEJ1Q9H9Q4 299 aaPredicted RBP22.72■■□□□ 1.23
TSPAN9-208ENST00000640568 HCFC1R1Q9NWW0 138 aa22.72■■□□□ 1.23
TSPAN9-208ENST00000640568 OBSL1O75147 1896 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 DENND4CQ5VZ89 1909 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 TMCO5BA8MYB1 307 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 E5RJQ4 531 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 H3BQ06 376 aaPredicted RBP22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 DDX3XO00571 662 aaKnown RBP eCLIP22.71■■□□□ 1.236e-8■■■□□ 17.5
TSPAN9-208ENST00000640568 PTMAP06454 111 aaKnown RBP22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 RHOP08100 348 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 MYL4P12829 197 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 HMGA1P17096 107 aaKnown RBP22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 USP46P62068 366 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 CENPCQ03188 943 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 PABPC1LQ4VXU2 614 aaKnown RBP22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 ATAT1Q5SQI0 421 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 RIPOR3Q96MK2 946 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 CPXM1Q96SM3 734 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 SLC4A5Q9BY07 1137 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 CNGB3Q9NQW8 809 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 DNMT3BQ9UBC3 853 aaKnown RBP22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 COG5Q9UP83 839 aa22.71■■□□□ 1.23
TSPAN9-208ENST00000640568 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.7■■□□□ 1.22
TSPAN9-208ENST00000640568 PAPLNO95428 1278 aa22.7■■□□□ 1.22
TSPAN9-208ENST00000640568 FGF19O95750 216 aa22.7■■□□□ 1.22
TSPAN9-208ENST00000640568 PTPN20Q4JDL3 420 aa22.7■■□□□ 1.22
TSPAN9-208ENST00000640568 TMTC1Q8IUR5 882 aa22.7■■□□□ 1.22
TSPAN9-208ENST00000640568 HS6ST3Q8IZP7 471 aa22.7■■□□□ 1.22
TSPAN9-208ENST00000640568 PDZD8Q8NEN9 1154 aa22.7■■□□□ 1.22
TSPAN9-208ENST00000640568 SLC30A5Q8TAD4 765 aa22.7■■□□□ 1.22
TSPAN9-208ENST00000640568 MYRFLQ96LU7 910 aa22.7■■□□□ 1.22
TSPAN9-208ENST00000640568 BAG1Q99933 345 aaPredicted RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms