RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 PAQR9Q6ZVX9 377 aa26.76■■□□□ 1.87
VEGFA-230ENST00000640482 CRYBG2Q8N1P7 616 aa26.76■■□□□ 1.87
VEGFA-230ENST00000640482 PDZD8Q8NEN9 1154 aa26.76■■□□□ 1.87
VEGFA-230ENST00000640482 ATP2A3Q93084 1043 aa26.76■■□□□ 1.87
VEGFA-230ENST00000640482 EXOC4Q96A65 974 aa26.76■■□□□ 1.87
VEGFA-230ENST00000640482 CYP3A43Q9HB55 503 aa26.76■■□□□ 1.87
VEGFA-230ENST00000640482 UTP3Q9NQZ2 479 aaKnown RBP eCLIP26.76■■□□□ 1.877e-7■■■■□ 19.4
VEGFA-230ENST00000640482 PCDHA5Q9Y5H7 936 aa26.76■■□□□ 1.87
VEGFA-230ENST00000640482 ZFHX2Q9C0A1 2572 aaPredicted RBP26.76■■□□□ 1.87
VEGFA-230ENST00000640482 VPS13AQ96RL7 3174 aa26.76■■□□□ 1.87
VEGFA-230ENST00000640482 STX10O60499 249 aa26.75■■□□□ 1.87
VEGFA-230ENST00000640482 AP1G2O75843 785 aa26.75■■□□□ 1.87
VEGFA-230ENST00000640482 GRSF1Q12849 480 aaKnown RBP eCLIP26.75■■□□□ 1.87
VEGFA-230ENST00000640482 GAS6Q14393 721 aa26.75■■□□□ 1.87
VEGFA-230ENST00000640482 WDR44Q5JSH3 913 aa26.75■■□□□ 1.87
VEGFA-230ENST00000640482 FUKQ8N0W3 1084 aa26.75■■□□□ 1.87
VEGFA-230ENST00000640482 SPATA20Q8TB22 786 aa26.75■■□□□ 1.87
VEGFA-230ENST00000640482 OVCA2Q8WZ82 227 aa26.75■■□□□ 1.87
VEGFA-230ENST00000640482 FBXO32Q969P5 355 aa26.75■■□□□ 1.87
VEGFA-230ENST00000640482 KCNK16Q96T55 309 aa26.75■■□□□ 1.87
VEGFA-230ENST00000640482 DNAI2Q9GZS0 605 aa26.75■■□□□ 1.87
VEGFA-230ENST00000640482 NIF3L1Q9GZT8 377 aa26.75■■□□□ 1.87
VEGFA-230ENST00000640482 KRT82Q9NSB4 513 aa26.75■■□□□ 1.87
VEGFA-230ENST00000640482 OTOL1A6NHN0 477 aaPredicted RBP26.74■■□□□ 1.87
VEGFA-230ENST00000640482 MCCD1P59942 119 aaPredicted RBP26.74■■□□□ 1.87
VEGFA-230ENST00000640482 SLC7A9P82251 487 aa26.74■■□□□ 1.87
VEGFA-230ENST00000640482 SATB1Q01826 763 aa26.74■■□□□ 1.87
VEGFA-230ENST00000640482 INCA1Q0VD86 236 aa26.74■■□□□ 1.87
VEGFA-230ENST00000640482 ORC1Q13415 861 aa26.74■■□□□ 1.87
VEGFA-230ENST00000640482 TMEM196Q5HYL7 178 aa26.74■■□□□ 1.87
VEGFA-230ENST00000640482 SLC2A14Q8TDB8 520 aa26.74■■□□□ 1.87
VEGFA-230ENST00000640482 EEF2KMTQ96G04 330 aa26.74■■□□□ 1.87
VEGFA-230ENST00000640482 ECT2Q9H8V3 914 aa26.74■■□□□ 1.87
VEGFA-230ENST00000640482 APOBEC3GQ9HC16 384 aaKnown RBP26.74■■□□□ 1.87
VEGFA-230ENST00000640482 COMMD8Q9NX08 183 aa26.74■■□□□ 1.87
VEGFA-230ENST00000640482 HMGXB4Q9UGU5 601 aa26.74■■□□□ 1.87
VEGFA-230ENST00000640482 WNT6Q9Y6F9 365 aa26.74■■□□□ 1.87
VEGFA-230ENST00000640482 ANAPC1Q9H1A4 1944 aa26.74■■□□□ 1.87
VEGFA-230ENST00000640482 FANCMQ8IYD8 2048 aa26.73■■□□□ 1.87
VEGFA-230ENST00000640482 TRDMT1O14717 391 aaKnown RBP26.73■■□□□ 1.87
VEGFA-230ENST00000640482 OAS1P00973 400 aaKnown RBP26.73■■□□□ 1.87
VEGFA-230ENST00000640482 TDGF1P13385 188 aa26.73■■□□□ 1.87
VEGFA-230ENST00000640482 CCDC130P13994 396 aa26.73■■□□□ 1.87
VEGFA-230ENST00000640482 MXI1P50539 228 aa26.73■■□□□ 1.87
VEGFA-230ENST00000640482 SLC5A3P53794 718 aa26.73■■□□□ 1.87
VEGFA-230ENST00000640482 NR1H3Q13133 447 aa26.73■■□□□ 1.87
VEGFA-230ENST00000640482 EML3Q32P44 896 aa26.73■■□□□ 1.87
VEGFA-230ENST00000640482 Q6ZS52 159 aa26.73■■□□□ 1.87
VEGFA-230ENST00000640482 ELOA2Q8IYF1 753 aaPredicted RBP26.73■■□□□ 1.87
VEGFA-230ENST00000640482 ERCC4Q92889 916 aaPredicted RBP26.73■■□□□ 1.87
VEGFA-230ENST00000640482 NT5C1AQ9BXI3 368 aa26.73■■□□□ 1.87
VEGFA-230ENST00000640482 LEFTY2O00292 366 aa26.72■■□□□ 1.87
VEGFA-230ENST00000640482 TNFRSF10BO14763 440 aa26.72■■□□□ 1.87
VEGFA-230ENST00000640482 SLC16A3O15427 465 aaKnown RBP26.72■■□□□ 1.87
VEGFA-230ENST00000640482 LILRB5O75023 590 aa26.72■■□□□ 1.87
VEGFA-230ENST00000640482 OLFM2O95897 454 aa26.72■■□□□ 1.87
VEGFA-230ENST00000640482 GJA4P35212 333 aa26.72■■□□□ 1.87
VEGFA-230ENST00000640482 FKBP3Q00688 224 aaKnown RBP26.72■■□□□ 1.87
VEGFA-230ENST00000640482 STIM1Q13586 685 aa26.72■■□□□ 1.87
VEGFA-230ENST00000640482 KIAA1958Q8N8K9 716 aa26.72■■□□□ 1.87
VEGFA-230ENST00000640482 RNF38Q9H0F5 515 aa26.72■■□□□ 1.87
VEGFA-230ENST00000640482 FAM49BQ9NUQ9 324 aa26.72■■□□□ 1.87
VEGFA-230ENST00000640482 CPQQ9Y646 472 aa26.72■■□□□ 1.87
VEGFA-230ENST00000640482 PAPSS2O95340 614 aaPredicted RBP26.71■■□□□ 1.87
VEGFA-230ENST00000640482 NFATC1O95644 943 aa26.71■■□□□ 1.87
VEGFA-230ENST00000640482 LRRC63Q05C16 580 aa26.71■■□□□ 1.87
VEGFA-230ENST00000640482 DDX42Q86XP3 938 aaKnown RBP eCLIP26.71■■□□□ 1.874e-7■■■□□ 19
VEGFA-230ENST00000640482 C12orf29Q8N999 325 aa26.71■■□□□ 1.87
VEGFA-230ENST00000640482 SUMF1Q8NBK3 374 aa26.71■■□□□ 1.87
VEGFA-230ENST00000640482 FBXL13Q8NEE6 735 aa26.71■■□□□ 1.87
VEGFA-230ENST00000640482 SCAMP5Q8TAC9 235 aa26.71■■□□□ 1.87
VEGFA-230ENST00000640482 CHFRQ96EP1 664 aa26.71■■□□□ 1.87
VEGFA-230ENST00000640482 FAXDC2Q96IV6 333 aa26.71■■□□□ 1.87
VEGFA-230ENST00000640482 SMOQ99835 787 aa26.71■■□□□ 1.87
VEGFA-230ENST00000640482 HINFPQ9BQA5 517 aa26.71■■□□□ 1.87
VEGFA-230ENST00000640482 CSNK1G1Q9HCP0 422 aa26.71■■□□□ 1.87
VEGFA-230ENST00000640482 IL37Q9NZH6 218 aa26.71■■□□□ 1.87
VEGFA-230ENST00000640482 FAM200BP0CF97 657 aa26.7■■□□□ 1.86
VEGFA-230ENST00000640482 CD58P19256 250 aa26.7■■□□□ 1.86
VEGFA-230ENST00000640482 DRD1P21728 446 aa26.7■■□□□ 1.86
VEGFA-230ENST00000640482 TCERG1LQ5VWI1 586 aa26.7■■□□□ 1.86
VEGFA-230ENST00000640482 ANKRD40Q6AI12 368 aa26.7■■□□□ 1.86
VEGFA-230ENST00000640482 FSTL4Q6MZW2 842 aa26.7■■□□□ 1.86
VEGFA-230ENST00000640482 ZC3H3Q8IXZ2 948 aaKnown RBP26.7■■□□□ 1.86
VEGFA-230ENST00000640482 RUBCNQ92622 972 aa26.7■■□□□ 1.86
VEGFA-230ENST00000640482 TWNKQ96RR1 684 aa26.7■■□□□ 1.86
VEGFA-230ENST00000640482 P2RY13Q9BPV8 354 aa26.7■■□□□ 1.86
VEGFA-230ENST00000640482 EPC1Q9H2F5 836 aa26.7■■□□□ 1.86
VEGFA-230ENST00000640482 FBXO44Q9H4M3 255 aa26.7■■□□□ 1.86
VEGFA-230ENST00000640482 RAB20Q9NX57 234 aa26.7■■□□□ 1.86
VEGFA-230ENST00000640482 CILPO75339 1184 aa26.69■■□□□ 1.86
VEGFA-230ENST00000640482 MBL2P11226 248 aaPredicted RBP26.69■■□□□ 1.86
VEGFA-230ENST00000640482 ADORA2BP29275 332 aa26.69■■□□□ 1.86
VEGFA-230ENST00000640482 PPP1R2P41236 205 aa26.69■■□□□ 1.86
VEGFA-230ENST00000640482 MAP3K7CLP57077 242 aa26.69■■□□□ 1.86
VEGFA-230ENST00000640482 ZXDBP98169 803 aa26.69■■□□□ 1.86
VEGFA-230ENST00000640482 DCAF17Q5H9S7 520 aaPredicted RBP26.69■■□□□ 1.86
VEGFA-230ENST00000640482 HECTD3Q5T447 861 aa26.69■■□□□ 1.86
VEGFA-230ENST00000640482 SNX30Q5VWJ9 437 aa26.69■■□□□ 1.86
VEGFA-230ENST00000640482 TTC39CQ8N584 583 aa26.69■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms